JP2020534858A - 短鎖脂肪酸生成腸内細菌群集の変化を用いたアルコール性肝疾患の診断および治療用組成物 - Google Patents
短鎖脂肪酸生成腸内細菌群集の変化を用いたアルコール性肝疾患の診断および治療用組成物 Download PDFInfo
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Abstract
Description
アルコールを摂取させた対照群の腸内に存在する請求項1によるアルコール性脂肪肝症状緩和活性を有するロゼブリア属菌株の量を測定する第2段階;および
前記第1段階および第2段階で測定したロゼブリア属菌株の量を比較する第3段階を含むアルコール性脂肪肝診断に関する情報を提供する方法を提供することを目的とする。
本発明によるアルコール性脂肪肝改善活性を有するロゼブリア属菌株は、例えば、アルコール摂取量による腸内菌叢分析結果、アルコール摂取量が少ない正常グループでロゼブリア属菌株が連関性を示し、前記連関性を示したロゼブリア属菌株を選択して本発明によるアルコール性脂肪肝改善活性を有するロゼブリア属菌株として採択した。本発明によるロゼブリア属菌株は、腸内菌叢に由来したものであってもよい。
(1)上皮細胞間密着結合(tight junction)を強化、上皮細胞膜の上皮電気抵抗を増加、Zo−1およびOccludin遺伝子の発現量増加、またはMUC2遺伝子の発現量増加、
(2)アルコール性脂肪肝の発生原因物質、例えば、血中リポ多糖類(LPS)の濃度減少、
(3)肝損傷の改善、血中ALT濃度減少、血中AST濃度減少、肝の中性脂肪減少、生体内腸壁透過度実験でFITC投与時血中FITC蛍光発現減少、またはOil Red O染色結果、肝の脂肪量減少、
(4)脂肪肝誘発遺伝子の発現減少、またはPPAR−rおよびCD36遺伝子の発現量減少、
(5)肝損傷症状の改善または治療、CXCL2およびCXCL5遺伝子の発現量減少、
(6)肝での炎症反応減少、またはTNF−αおよびIL−1β遺伝子の発現量減少。
(7)腸内微生物菌叢回復および多様性増加、
(8)DNA回復および代謝と関連した腸内微生物菌叢機能性増加。
韓国人双子コホートで410人の一卵性、二卵性双子とその家族らを対象にして大便試料を採取して−80℃に冷凍保管した。冷凍保管された試料を実験室に移してQIAamp FAST DNA stool mini kit(Qiagen)を用いてバクテリアゲノムDNAを抽出した。本コホートではアルコール摂取量(g/day)およびアルコール摂取習慣アンケート調査結果であるAUDITスコア臨床指標を活用して、AUDITスコアによるゾーンI(0−7点、正常グループ)、ゾーンII(8−15点)、ゾーンIII(16−40点、アルコール摂取量が多いグループ)に分けて分析した。本コホートのアルコール摂取量(g/day)およびAUDITスコアの相関関係分析結果およびグループによる年齢、性別、C反応性蛋白(hsCRP)臨床指標情報を図1に示した。
実施例1で抽出されたDNAを、バクテリアの16S rRNA遺伝子のV4領域をターゲットとする下記表1の515F/806Rプライマー(配列番号1および2)を用いて増幅し、Illumina社のMiSeq機器を用いて塩基配列データを生成した。生成された大容量塩基配列をQIIME pipelineを使用して分析し、腸内細菌の全体遺伝情報を確認して腸内菌叢の構造を把握後、アルコール摂取量指標との連関性を観察した。
年齢、性別、家族歴を補正して混乱変数を制御することができるMaAsLin(Multivariate analysis by linear models)ソフトウェアを用いて、多変量分析を通じてアルコール摂取量による腸内菌叢の変化およびこれによる腸の健康を特定することができる腸内バクテリアを糾明した。MaAsLinソフトウェアを使用して年齢、性別、双子と家族関係をランダム変数に、アルコール摂取グループを補正変数に指定後、健康要因と腸内菌叢の連関性をOTU(Operational Taxonomic Units、16S基盤生物情報学的細菌分類単位)および分類群(taxon)に分けて分析し、その結果を図3および図4に示した。
アルコール摂取量が多いグループと正常グループで腸内菌叢の発生パターンを把握するためにcytoscapeソフトウェアを用いてネットワーク分析を実施した。
韓国人双子コホートの一部である307個の糞便試料で腸内菌叢由来代謝産物である短鎖脂肪酸(short chain fatty acid)分析を実施した。同量の糞便試料を滅菌された3次蒸留水に溶かし、95%(v/v)硫酸を使用して酸性化させた後、遠心分離して上層液を回収した。
健康な韓国人の腸内菌叢でロゼブリア・インテスティナリス(Roseburia intestinalis)菌株を分離した。具体的に、腸内菌叢分離用試料を健康な一般人成人から提供を受けて、糞便試料から菌株を分離、同定した(IRB承認番号:1602/001−001)。
腸上皮細胞間膜強化特性(tight junction強化特性)試験のための動物細胞としてCaco−2細胞株を米国細胞株銀行(ATCC)から分譲を受けて使用した。Caco−2細胞株はヒト大腸由来結腸直腸癌adenocarcinoma細胞であって、形態は上皮細胞である。
8−1:ロゼブリア属菌株の鞭毛抽出
ロゼブリア属菌株の鞭毛を抽出するために、以下のように実施した。
実施例8−1で得られたタンパク質抽出物をPAGE gel、およびLTQ−Orbitrap質量分析器を用いて分析した。
ロゼブリア属菌株由来鞭毛に腸上皮細胞間膜密着結合強化特性があるのを確認するために、以下のように実施した。
単一菌株投与による腸内菌叢の変化とアルコール性脂肪肝の因果関係を糾明するために動物実験を実施した。
10−1:定量分析
実施例9の実験終了時、マウスの血液を収得して血中アラニンアミノ伝達酵素(ALT)、バクテリアのグラム陰性菌の細胞壁を構成するリポ多糖類(LPS、lipopolysaccharide)、およびアスパラギン酸アミノ基転移酵素(AST)を測定した。また、肝での中性脂肪(Triglycerides、TG)を測定し、実験終了直前にfluorescein isothiocyanate(FITC)蛍光が付けられたデキストラン(4kDa)を経口投与(60mg/100g body weight)して4時間後に血液を収得して血中内蛍光を測定するin vivo permeability(FITC)を実施した。その結果を図11に示した。
組織病理学的観察のために肝組織を10%ホルマリンで固定させた後、ヘマトキシリン&エオシン(H&E、Hematoxylin&Eosin)染色を実施した結果を図12に示し、肝組織の損傷尺度であるOil Red O染色を実施した結果およびImageJ softwareを使用してこれを定量した結果を図13aおよび図13bに示した。
組織の遺伝子発現量分析のために肝組織のRNAをRNeasy Lipid tissue mini kit(Qiagen)を使用して抽出し、腸組織のRNAをeasy−spin total RNA extraction kit(Intron)を使用して抽出した。これをhigh capacity RNA−to−cDNA kit(Applied biosystems)を使用してcDNAとして合成させた後、roter−gene SYBR green PCR kit(Qiagen)を使用して遺伝子発現量を分析した結果を図14(肝組織)、および図15a(腸組織)に示した。
腸組織のタンパク質発現量分析のために腸組織のタンパク質をprotease inhibitor cocktailが添加されたRIPAバッファーに均質化して抽出後、BCA protein assay kit(Thermo Fisher Scientific)を使用して定量した。10% β−mercaptoethanolが含まれているLaemmli sample loading buffer(Bio−Rad)を添加して10分間85°Cで沸かした後、10% SDS−PAGE gelを実施した。その後、membraneは5%BSAが添加されたTBSTで1時間blocking後、1次、2次抗体を付けて反応を行った。反応の強さはGeneTools(Syngene)を通じて定量した。
実施例9の実験終了時、マウスの盲腸を収得して−81℃に冷凍保管し、試料を実験室に移してQIAamp FAST DNA stool mini kit(Qiagen)を用いてバクテリアgenomic DNAを抽出した。抽出されたDNAを、バクテリアの16S rRNA遺伝子のV3−4領域をターゲットとする下記表5のプライマー(配列番号28および29)を用いて増幅し、index PCRを行った後、Illumina社のMiSeq機器を用いて塩基配列データを生成した。生成された大容量塩基配列をQIIME pipelineを使用して分析し、腸内細菌の全体遺伝情報を確認して腸内菌叢の構造を把握後、グループによる単変量分析(LefSE)を実施した。
Claims (15)
- アルコール性脂肪肝の予防または改善活性を有する、ロゼブリア(Roseburia)属菌株。
- 前記ロゼブリア属菌株は、上皮細胞間密着結合(tight junction)の増加、アルコール性脂肪肝原因物質の減少、および腸壁透過性の減少からなる群より選択される1以上の特性を有するものである、請求項1に記載のロゼブリア属菌株。
- 前記上皮細胞間密着結合の増加特性は、前記ロゼブリア属菌株の鞭毛によるものである、請求項2に記載のロゼブリア属菌株。
- 前記上皮細胞間密着結合の増加は、アルコール性脂肪肝誘導動物モデルで、前記ロゼブリア属菌株で処置していない対照群に比べて、前記ロゼブリア属菌株処置群で上皮細胞膜の上皮電気抵抗増加、オクルディン(Occludin)遺伝子の発現量増加、またはMUC2遺伝子の発現量増加によるものである、請求項2に記載のロゼブリア属菌株。
- 前記ロゼブリア属菌株は、CXCL2遺伝子、CXCL5遺伝子、TNF−α遺伝子、およびIL−1β遺伝子からなる群より選択される1種以上の肝炎症性サイトカインの発現量減少特性を有する、請求項1に記載のロゼブリア属菌株。
- 前記アルコール性脂肪肝の予防または改善は、前記ロゼブリア属菌株の摂取による血中ALT濃度の減少、血中AST濃度の減少、肝の中性脂肪の減少、肝の脂肪量減少、および肝の脂肪合成関連遺伝子の発現減少からなる群より選択される1種以上の肝機能指標が改善されることである、請求項1に記載のロゼブリア属菌株。
- 前記肝の脂肪合成関連遺伝子は、PPAR−γまたはCD36である、請求項6に記載のロゼブリア属菌株。
- 前記菌株は、ロゼブリア・インテスティナリス(Roseburia intestinalis)である、請求項1に記載のロゼブリア属菌株。
- 前記菌株は、寄託番号KCTC13327BPを有するロゼブリア・インテスティナリス(Roseburia intestinalis)SNUG30017である、請求項1に記載のロゼブリア属菌株。
- 請求項1〜9のいずれか一項に記載のロゼブリア属菌株、前記菌株の鞭毛抽出物、前記菌株の培養物、前記培養物の濃縮液および乾燥物からなる群より選択される1種以上を含む、アルコール性脂肪肝の予防または治療用薬学組成物。
- 請求項1〜9のいずれか一項に記載のロゼブリア属菌株、前記菌株の鞭毛抽出物、前記菌株の培養物、前記培養物の濃縮液および乾燥物からなる群より選択される1種以上を含む、アルコール性脂肪肝の予防または改善用食品組成物。
- 請求項1〜9のいずれか一項に記載のロゼブリア属菌株、前記菌株の鞭毛抽出物、前記菌株の培養物、前記培養物の濃縮液および乾燥物からなる群より選択される1種以上を含む、アルコール性脂肪肝の予防または改善用プロバイオティクス組成物。
- 前記ロゼブリア属菌株は、腸内微生物菌叢の多様性増加、または代謝と関連した腸内微生物菌叢機能性増加を誘発するものである、請求項12に記載のプロバイオティクス組成物。
- 対象の腸内に存在する、請求項1〜9のいずれか一項に記載のロゼブリア属菌株を定量する製剤を含むアルコール性脂肪肝の診断用組成物。
- 脂肪酸代謝物である酪酸およびプロピオン酸の濃度を定量する製剤を含む、請求項14に記載のアルコール性脂肪肝の診断用組成物。
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PCT/KR2018/011564 WO2019066577A2 (ko) | 2017-09-28 | 2018-09-28 | 짧은 사슬 지방산 생성 장내 세균 군집의 변화를 이용한 알코올성 간 질환의 진단 및 치료용 조성물 |
KR10-2018-0115823 | 2018-09-28 | ||
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CN109259146B (zh) * | 2018-08-27 | 2022-05-20 | 南昌大学 | 鼠李糖乳杆菌在制备具有抑制脂肪肝病变功效的组合物中的应用 |
CN113993529A (zh) * | 2019-05-21 | 2022-01-28 | 潘德勒姆治疗公司 | 用于治疗肝脏病症的方法和组合物 |
KR102363094B1 (ko) | 2020-06-19 | 2022-02-16 | 한국식품연구원 | 장내 미생물을 이용한 간질환 위험도 예측 또는 진단용 조성물, 그를 이용한 진단키트, 정보제공방법 및 간질환 예방 또는 치료제 스크리닝 방법 |
CN111733137A (zh) * | 2020-07-13 | 2020-10-02 | 江南大学 | 一种筛选可预防和/或治疗酒精性肝损伤的药物的方法 |
KR20220041406A (ko) | 2020-09-25 | 2022-04-01 | 한국식품연구원 | 장내 미생물을 이용한 간질환 개선, 예방 또는 치료용 조성물 및 그를 이용한 간질환의 치료방법 |
CN113181151A (zh) * | 2020-12-29 | 2021-07-30 | 山东善维免疫科技有限公司 | 短链脂肪酸在预防或/和治疗肝损伤中的应用 |
KR102646205B1 (ko) | 2021-02-15 | 2024-03-12 | 국립안동대학교 산학협력단 | 엘라그산을 유효성분으로 포함하는 장내 미생물 개선용 조성물 |
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AU2023210125A1 (en) * | 2022-01-20 | 2024-08-08 | Korea Institute Of Science And Technology | Composition for prevention, amelioration or treatment of non-alcoholic fatty liver disease, comprising extracellular vesicles derived from roseburia spp. or bifidobacterium spp. |
CN114621936B (zh) * | 2022-03-02 | 2023-10-24 | 中南大学湘雅二医院 | 蛋白组合物及其用途 |
CN114796285B (zh) * | 2022-04-29 | 2023-06-23 | 大连工业大学 | 嗜黏蛋白阿克曼氏菌在缓解高尿酸血症中的应用 |
CN114854884A (zh) * | 2022-05-27 | 2022-08-05 | 山东农业大学 | 用属水平的粪便微生物预警或无创诊断脂肪肝奶牛的方法 |
CN115804793A (zh) * | 2022-06-08 | 2023-03-17 | 广州知易生物科技有限公司 | 嗜粘蛋白阿克曼菌在制备改善酒精性肝功能异常的组合物中的应用、组合物及应用 |
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US11510948B2 (en) | 2022-11-29 |
KR20190037170A (ko) | 2019-04-05 |
CN111527195B (zh) | 2023-11-03 |
AU2018341734A1 (en) | 2020-04-16 |
EP3690026A2 (en) | 2020-08-05 |
CA3076884A1 (en) | 2019-04-04 |
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US20210052674A1 (en) | 2021-02-25 |
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US11903980B2 (en) | 2024-02-20 |
JP7033655B2 (ja) | 2022-03-10 |
US20230190829A1 (en) | 2023-06-22 |
WO2019066577A3 (ko) | 2019-07-04 |
WO2019066577A2 (ko) | 2019-04-04 |
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