JP2019526225A5 - - Google Patents

Download PDF

Info

Publication number
JP2019526225A5
JP2019526225A5 JP2018556287A JP2018556287A JP2019526225A5 JP 2019526225 A5 JP2019526225 A5 JP 2019526225A5 JP 2018556287 A JP2018556287 A JP 2018556287A JP 2018556287 A JP2018556287 A JP 2018556287A JP 2019526225 A5 JP2019526225 A5 JP 2019526225A5
Authority
JP
Japan
Prior art keywords
dna polymerase
seq
primer
nucleotide
kit
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP2018556287A
Other languages
English (en)
Japanese (ja)
Other versions
JP2019526225A (ja
JP6915939B2 (ja
Filing date
Publication date
Application filed filed Critical
Priority claimed from PCT/US2017/030135 external-priority patent/WO2017190012A1/en
Publication of JP2019526225A publication Critical patent/JP2019526225A/ja
Publication of JP2019526225A5 publication Critical patent/JP2019526225A5/ja
Application granted granted Critical
Publication of JP6915939B2 publication Critical patent/JP6915939B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

JP2018556287A 2016-04-29 2017-04-28 核酸配列決定方法 Expired - Fee Related JP6915939B2 (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201662329489P 2016-04-29 2016-04-29
US62/329,489 2016-04-29
US201762444733P 2017-01-10 2017-01-10
US62/444,733 2017-01-10
PCT/US2017/030135 WO2017190012A1 (en) 2016-04-29 2017-04-28 Method of nucleic acid sequence determination

Publications (3)

Publication Number Publication Date
JP2019526225A JP2019526225A (ja) 2019-09-19
JP2019526225A5 true JP2019526225A5 (cg-RX-API-DMAC10.html) 2019-12-26
JP6915939B2 JP6915939B2 (ja) 2021-08-11

Family

ID=58672825

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2018556287A Expired - Fee Related JP6915939B2 (ja) 2016-04-29 2017-04-28 核酸配列決定方法

Country Status (9)

Country Link
US (2) US10584379B2 (cg-RX-API-DMAC10.html)
EP (1) EP3449011B1 (cg-RX-API-DMAC10.html)
JP (1) JP6915939B2 (cg-RX-API-DMAC10.html)
KR (1) KR102231977B1 (cg-RX-API-DMAC10.html)
CN (1) CN109154024B (cg-RX-API-DMAC10.html)
AU (1) AU2017258523B2 (cg-RX-API-DMAC10.html)
CA (1) CA3022431C (cg-RX-API-DMAC10.html)
SG (1) SG11201809522WA (cg-RX-API-DMAC10.html)
WO (1) WO2017190012A1 (cg-RX-API-DMAC10.html)

Families Citing this family (44)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10597643B2 (en) 2016-04-29 2020-03-24 Omniome, Inc. Polymerases engineered to reduce nucleotide-independent DNA binding
CN109154024B (zh) 2016-04-29 2022-03-04 欧姆尼欧美公司 核酸序列测定方法
US10443098B2 (en) * 2016-08-15 2019-10-15 Omniome, Inc. Method and system for sequencing nucleic acids
AU2018210944B2 (en) * 2017-01-20 2021-07-22 Pacific Biosciences Of California, Inc. Process for cognate nucleotide detection in a nucleic acid sequencing workflow
US10161003B2 (en) 2017-04-25 2018-12-25 Omniome, Inc. Methods and apparatus that increase sequencing-by-binding efficiency
WO2019079593A1 (en) 2017-10-19 2019-04-25 Omniome, Inc. BACKGROUND NOISE REDUCTION AND STABILIZATION OF SIMULTANEOUS COMPLEXES IN LINKED ASSAY WORKFLOWS
RU2751359C2 (ru) 2018-02-16 2021-07-13 Иллюмина, Инк. Нуклеотиды, меченные зарядом, и способы их применения
JP7554117B2 (ja) 2018-04-26 2024-09-19 パシフィック・バイオサイエンシズ・オブ・カリフォルニア・インク. 核酸-ヌクレオチド-ポリメラーゼ複合体を安定化するための方法及び組成物
KR20210045361A (ko) 2018-05-17 2021-04-26 레커그니션 어낼러틱스 엘엘씨 효소 활성의 직접 전기적 측정을 위한 장치, 시스템 및 방법
JP2021525078A (ja) 2018-05-31 2021-09-24 オムニオム インコーポレイテッドOmniome, Inc. 核酸配列決定におけるシグナル対ノイズの増加
AU2019312152A1 (en) 2018-07-24 2021-02-18 Pacific Biosciences Of California, Inc. Serial formation of ternary complex species
US11242512B2 (en) 2018-09-17 2022-02-08 Omniome, Inc. Engineered polymerases for improved sequencing
US10768173B1 (en) 2019-09-06 2020-09-08 Element Biosciences, Inc. Multivalent binding composition for nucleic acid analysis
US10704094B1 (en) 2018-11-14 2020-07-07 Element Biosciences, Inc. Multipart reagents having increased avidity for polymerase binding
US10876148B2 (en) 2018-11-14 2020-12-29 Element Biosciences, Inc. De novo surface preparation and uses thereof
US20240011086A1 (en) 2018-11-15 2024-01-11 Omniome, Inc. Electronic detection of nucleic acid structure
CN211311438U (zh) 2018-12-04 2020-08-21 欧姆尼欧美公司 流动池
EP3899032A2 (en) 2018-12-20 2021-10-27 Omniome, Inc. Temperature control for analysis of nucleic acids and other analytes
US12351855B2 (en) 2019-01-30 2025-07-08 Arizona Board Of Regents On Behalf Of Arizona State University Bioelectronic circuits, systems and methods for preparing and using them
US11499189B2 (en) 2019-02-14 2022-11-15 Pacific Biosciences Of California, Inc. Mitigating adverse impacts of detection systems on nucleic acids and other biological analytes
US12313627B2 (en) 2019-05-01 2025-05-27 Element Biosciences, Inc. Multivalent binding composition for nucleic acid analysis
WO2020242901A1 (en) * 2019-05-24 2020-12-03 Element Biosciences, Inc. Polymerase-nucleotide conjugates for sequencing by trapping
CA3140279A1 (en) * 2019-06-20 2020-12-24 Arizona Board Of Regents On Behalf Of Arizona State University Direct electrical readout of nucleic acid sequences
JP2022537069A (ja) * 2019-06-21 2022-08-23 サーモ フィッシャー サイエンティフィック バルティックス ユーエービー 次世代配列決定ライブラリを調製するための核酸の標識化に有用なオリゴヌクレオチドが連結された三リン酸ヌクレオチド
EP4028407B1 (en) 2019-09-10 2023-08-16 Pacific Biosciences of California, Inc. Reversible modification of nucleotides
US11287422B2 (en) 2019-09-23 2022-03-29 Element Biosciences, Inc. Multivalent binding composition for nucleic acid analysis
WO2021076152A1 (en) 2019-10-18 2021-04-22 Omniome, Inc. Methods and compositions for capping nucleic acids
US20210139867A1 (en) 2019-11-08 2021-05-13 Omniome, Inc. Engineered polymerases for improved sequencing by binding
DE202019106695U1 (de) 2019-12-02 2020-03-19 Omniome, Inc. System zur Sequenzierung von Nukleinsäuren in Fluidschaum
DE202019106694U1 (de) 2019-12-02 2020-03-19 Omniome, Inc. System zur Sequenzierung von Nukleinsäuren in Fluidschaum
EP4114966B1 (en) 2020-03-03 2025-02-26 Pacific Biosciences Of California, Inc. Methods and compositions for sequencing double stranded nucleic acids
JP2023524079A (ja) 2020-04-30 2023-06-08 アリゾナ・ボード・オブ・リージェンツ・オン・ビハーフ・オブ・アリゾナ・ステイト・ユニバーシティー 生体高分子の配列決定のための方法
CN115836135A (zh) 2020-05-05 2023-03-21 加利福尼亚太平洋生物科学股份有限公司 用于修饰聚合酶-核酸复合物的组合物和方法
JP2023532231A (ja) * 2020-06-30 2023-07-27 イルミナ インコーポレイテッド 傷なしdnaを生成するための触媒的に制御された合成による配列決定
WO2022240764A1 (en) 2021-05-10 2022-11-17 Pacific Biosciences Of California, Inc. Single-molecule seeding and amplification on a surface
WO2022240766A1 (en) 2021-05-10 2022-11-17 Pacific Biosciences Of California, Inc. Dna amplification buffer replenishment during rolling circle amplification
EP4352244A4 (en) 2021-06-07 2025-04-16 Arizona Board of Regents on behalf of Arizona State University Methods for sequencing biopolymers
CN119061125A (zh) 2021-07-21 2024-12-03 元素生物科学公司 用于核酸测序的方法
WO2023035108A1 (zh) * 2021-09-07 2023-03-16 深圳华大智造科技股份有限公司 一种用于分析靶多核苷酸的序列的方法
WO2023081485A1 (en) * 2021-11-08 2023-05-11 Pacific Biosciences Of California, Inc. Stepwise sequencing of a polynucleotide with a homogenous reaction mixture
CA3264896A1 (en) 2022-08-15 2024-02-22 Element Biosciences, Inc. SPATIAL RESOLUTION SURFACE CAPTURE OF NUCLEIC ACIDS
EP4627115A1 (en) 2022-11-29 2025-10-08 Element Biosciences, Inc. Flow cell devices and optical systems for nucleic acid sequencing
EP4739790A1 (en) 2023-07-06 2026-05-13 Pacific Biosciences of California, Inc. Methods and compositions for stabilizing concatemers
WO2025244989A1 (en) 2024-05-21 2025-11-27 Pacific Biosciences Of California, Inc. Selectively functionalized nanoscale wells

Family Cites Families (29)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1991006678A1 (en) 1989-10-26 1991-05-16 Sri International Dna sequencing
US7057026B2 (en) 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
US7414116B2 (en) 2002-08-23 2008-08-19 Illumina Cambridge Limited Labelled nucleotides
AU2003269991A1 (en) * 2003-08-20 2005-03-10 Applera Corporation Polymerase compositions
US8071755B2 (en) 2004-05-25 2011-12-06 Helicos Biosciences Corporation Nucleotide analogs
AU2005254984B2 (en) * 2004-06-10 2008-10-16 Ge Healthcare Bio-Sciences Corp. Method for nucleic acid analysis
US7264934B2 (en) 2004-06-10 2007-09-04 Ge Healthcare Bio-Sciences Corp. Rapid parallel nucleic acid analysis
US7315019B2 (en) 2004-09-17 2008-01-01 Pacific Biosciences Of California, Inc. Arrays of optical confinements and uses thereof
US7482120B2 (en) 2005-01-28 2009-01-27 Helicos Biosciences Corporation Methods and compositions for improving fidelity in a nucleic acid synthesis reaction
US7544794B1 (en) 2005-03-11 2009-06-09 Steven Albert Benner Method for sequencing DNA and RNA by synthesis
EP1987159B2 (en) * 2006-02-08 2020-08-12 Illumina Cambridge Limited Method for sequencing a polynucleotide template
SG170802A1 (en) 2006-03-31 2011-05-30 Solexa Inc Systems and devices for sequence by synthesis analysis
US8962293B2 (en) * 2006-10-18 2015-02-24 Roche Molecular Systems, Inc. DNA polymerases and related methods
US8026091B2 (en) * 2007-07-13 2011-09-27 Roche Molecular Systems, Inc. DNA polymerases and related methods
US8652781B2 (en) 2008-02-12 2014-02-18 Pacific Biosciences Of California, Inc. Cognate sampling kinetics
US8628940B2 (en) 2008-09-24 2014-01-14 Pacific Biosciences Of California, Inc. Intermittent detection during analytical reactions
EP2271751B1 (en) 2008-03-31 2015-07-22 Pacific Biosciences of California, Inc. Generation of modified polymerases for improved accuracy in single molecule sequencing
US8133672B2 (en) 2008-03-31 2012-03-13 Pacific Biosciences Of California, Inc. Two slow-step polymerase enzyme systems and methods
EP2607496B1 (en) 2008-12-23 2014-07-16 Illumina, Inc. Methods useful in nucleic acid sequencing protocols
WO2010111674A2 (en) 2009-03-27 2010-09-30 Life Technologies Corporation Methods and apparatus for single molecule sequencing using energy transfer detection
WO2010141391A2 (en) 2009-06-05 2010-12-09 Life Technologies Corporation Mutant dna polymerases
EP2742151B1 (en) 2011-08-10 2017-10-25 Life Technologies Corporation Polymerase compositions
WO2013096692A1 (en) 2011-12-21 2013-06-27 Illumina, Inc. Apparatus and methods for kinetic analysis and determination of nucleic acid sequences
TWI487789B (zh) 2012-12-24 2015-06-11 Ind Tech Res Inst 單離的脫氧核糖核酸聚合酶、套組與其應用
GB201301178D0 (en) 2013-01-23 2013-03-06 Dynamic Biosensors Gmbh Method for sequencing a template nucleic acid immobilized on a substrate
EP3052652B1 (en) 2013-09-30 2022-11-23 Life Technologies Corporation Polymerase compositions, methods of making and using same
US10077470B2 (en) 2015-07-21 2018-09-18 Omniome, Inc. Nucleic acid sequencing methods and systems
US10597643B2 (en) 2016-04-29 2020-03-24 Omniome, Inc. Polymerases engineered to reduce nucleotide-independent DNA binding
CN109154024B (zh) 2016-04-29 2022-03-04 欧姆尼欧美公司 核酸序列测定方法

Similar Documents

Publication Publication Date Title
WO2013188471A2 (en) Method of sequence determination using sequence tags
JP2017501685A5 (cg-RX-API-DMAC10.html)
KR20170097788A (ko) 표적 핵산의 바코딩을 위한 멀티 프라이머 증폭 방법
EP3568493B1 (en) Methods and compositions for reducing redundant molecular barcodes created in primer extension reactions
CN107250445A (zh) 用于高通量研究的单个细胞核酸
US20150344948A1 (en) Universal sanger sequencing from next-gen sequencing amplicons
CN107012202B (zh) 核酸扩增的精度管理方法、精度管理用试剂及其试剂盒
US20200299764A1 (en) System and method for transposase-mediated amplicon sequencing
JP2006521799A5 (cg-RX-API-DMAC10.html)
US20130084568A1 (en) Probe, and polymorphism detection method using the same
JP2018512121A5 (cg-RX-API-DMAC10.html)
JP6630672B2 (ja) Ngsシステム用の対照及びそれを用いる方法
JP2010035532A (ja) アレル特異的pcr法
CA2697532A1 (en) Method of amplifying nucleic acid
KR102265417B1 (ko) 단일염기다형성 다중 분석용 프라이머
US20090275028A1 (en) Method of detecting target nucleic acid
Xu Detecting Targets Without Thermal Cycling in Food: Isothermal Amplification and Hybridization
JP2006166907A5 (cg-RX-API-DMAC10.html)
JP6853523B2 (ja) ヘリカーゼを用いたpcr
US11225684B2 (en) Method and device for SNP genotyping
KR101883847B1 (ko) 무의 자가불화합 인자형 판별용 프라이머 세트
US20160222443A1 (en) Quantification of Micro RNA
JP3598194B2 (ja) 核酸塩基配列決定方法
EP3845666B1 (en) A method of detecting small rna
WO2007092033A3 (en) Rapid identification of the varieties and genotypes of cryptococcus neoformans species complex using a high-throughput flow cytometer