JP2018527902A5 - - Google Patents
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- JP2018527902A5 JP2018527902A5 JP2018502120A JP2018502120A JP2018527902A5 JP 2018527902 A5 JP2018527902 A5 JP 2018527902A5 JP 2018502120 A JP2018502120 A JP 2018502120A JP 2018502120 A JP2018502120 A JP 2018502120A JP 2018527902 A5 JP2018527902 A5 JP 2018527902A5
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- 238000000034 method Methods 0.000 claims 49
- 239000000523 sample Substances 0.000 claims 29
- 102000004169 proteins and genes Human genes 0.000 claims 17
- 108090000623 proteins and genes Proteins 0.000 claims 17
- 108091034117 Oligonucleotide Proteins 0.000 claims 11
- 210000004027 cell Anatomy 0.000 claims 10
- 238000001514 detection method Methods 0.000 claims 7
- 210000004895 subcellular structure Anatomy 0.000 claims 7
- 238000002493 microarray Methods 0.000 claims 4
- 108090000765 processed proteins & peptides Proteins 0.000 claims 4
- 238000006243 chemical reaction Methods 0.000 claims 3
- 102000004196 processed proteins & peptides Human genes 0.000 claims 3
- 238000000746 purification Methods 0.000 claims 3
- 241000972773 Aulopiformes Species 0.000 claims 2
- WSFSSNUMVMOOMR-UHFFFAOYSA-N Formaldehyde Chemical compound O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 claims 2
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 claims 2
- 229920006318 anionic polymer Polymers 0.000 claims 2
- 230000000295 complement effect Effects 0.000 claims 2
- 229960000633 dextran sulfate Drugs 0.000 claims 2
- 238000009396 hybridization Methods 0.000 claims 2
- 230000001678 irradiating effect Effects 0.000 claims 2
- 108020004707 nucleic acids Proteins 0.000 claims 2
- 102000039446 nucleic acids Human genes 0.000 claims 2
- 150000007523 nucleic acids Chemical class 0.000 claims 2
- 229920001184 polypeptide Polymers 0.000 claims 2
- 235000019515 salmon Nutrition 0.000 claims 2
- 108091023037 Aptamer Proteins 0.000 claims 1
- 102100034343 Integrase Human genes 0.000 claims 1
- 108010043958 Peptoids Proteins 0.000 claims 1
- 108010092799 RNA-directed DNA polymerase Proteins 0.000 claims 1
- 230000002159 abnormal effect Effects 0.000 claims 1
- 238000001261 affinity purification Methods 0.000 claims 1
- 210000004748 cultured cell Anatomy 0.000 claims 1
- 238000005286 illumination Methods 0.000 claims 1
- 238000004949 mass spectrometry Methods 0.000 claims 1
- 230000003287 optical effect Effects 0.000 claims 1
- 239000012188 paraffin wax Substances 0.000 claims 1
- 238000002331 protein detection Methods 0.000 claims 1
- 238000012163 sequencing technique Methods 0.000 claims 1
- 238000012800 visualization Methods 0.000 claims 1
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2021178589A JP2022020721A (ja) | 2015-07-17 | 2021-11-01 | 横断組織切片のユーザー定義領域における複数のタンパク質の同時定量 |
Applications Claiming Priority (9)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201562193819P | 2015-07-17 | 2015-07-17 | |
| US62/193,819 | 2015-07-17 | ||
| US201562261654P | 2015-12-01 | 2015-12-01 | |
| US62/261,654 | 2015-12-01 | ||
| US201662277283P | 2016-01-11 | 2016-01-11 | |
| US62/277,283 | 2016-01-11 | ||
| US201662323018P | 2016-04-15 | 2016-04-15 | |
| US62/323,018 | 2016-04-15 | ||
| PCT/US2016/042455 WO2017015097A1 (en) | 2015-07-17 | 2016-07-15 | Simultaneous quantification of a plurality of proteins in a user-defined region of a cross-sectioned tissue |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021178589A Division JP2022020721A (ja) | 2015-07-17 | 2021-11-01 | 横断組織切片のユーザー定義領域における複数のタンパク質の同時定量 |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2018527902A JP2018527902A (ja) | 2018-09-27 |
| JP2018527902A5 true JP2018527902A5 (enExample) | 2019-09-12 |
| JP6971219B2 JP6971219B2 (ja) | 2021-11-24 |
Family
ID=56550406
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2018502120A Active JP6971219B2 (ja) | 2015-07-17 | 2016-07-15 | 横断組織切片のユーザー定義領域における複数のタンパク質の同時定量 |
| JP2021178589A Pending JP2022020721A (ja) | 2015-07-17 | 2021-11-01 | 横断組織切片のユーザー定義領域における複数のタンパク質の同時定量 |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021178589A Pending JP2022020721A (ja) | 2015-07-17 | 2021-11-01 | 横断組織切片のユーザー定義領域における複数のタンパク質の同時定量 |
Country Status (9)
| Country | Link |
|---|---|
| US (2) | US10501777B2 (enExample) |
| EP (2) | EP4368992A3 (enExample) |
| JP (2) | JP6971219B2 (enExample) |
| KR (1) | KR102545430B1 (enExample) |
| CN (1) | CN108350483A (enExample) |
| AU (2) | AU2016297513B2 (enExample) |
| ES (1) | ES2975361T3 (enExample) |
| SG (1) | SG10202107055SA (enExample) |
| WO (1) | WO2017015097A1 (enExample) |
Families Citing this family (94)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US10787701B2 (en) | 2010-04-05 | 2020-09-29 | Prognosys Biosciences, Inc. | Spatially encoded biological assays |
| HRP20151294T1 (hr) | 2010-04-05 | 2016-03-11 | Prognosys Biosciences, Inc. | Biološka testiranja sa prostornim kodiranjem |
| JP2014531908A (ja) | 2011-10-14 | 2014-12-04 | プレジデント アンド フェローズ オブ ハーバード カレッジ | 構造アッセンブリによる配列決定 |
| ES2991004T3 (es) | 2011-12-22 | 2024-12-02 | Harvard College | Métodos para la detección de analitos |
| EP2971184B1 (en) | 2013-03-12 | 2019-04-17 | President and Fellows of Harvard College | Method of generating a three-dimensional nucleic acid containing matrix |
| LT3013984T (lt) | 2013-06-25 | 2023-06-12 | Prognosys Biosciences, Inc. | Biologinių taikinių erdvinių modelių mėginyje nustatymo būdai |
| WO2016007839A1 (en) | 2014-07-11 | 2016-01-14 | President And Fellows Of Harvard College | Methods for high-throughput labelling and detection of biological features in situ using microscopy |
| CN120425026A (zh) | 2015-04-10 | 2025-08-05 | 十程基因技术瑞典公司 | 生物样本的空间区别、多重核酸分析 |
| US10501777B2 (en) | 2015-07-17 | 2019-12-10 | Nanostring Technologies, Inc. | Simultaneous quantification of a plurality of proteins in a user-defined region of a cross-sectioned tissue |
| CN108350486B (zh) | 2015-07-17 | 2021-09-03 | 纳米线科技公司 | 在横切面组织的用户定义区域中的基因表达的同时定量 |
| AU2017257624B2 (en) | 2016-04-25 | 2023-05-25 | President And Fellows Of Harvard College | Hybridization chain reaction methods for in situ molecular detection |
| WO2017222453A1 (en) | 2016-06-21 | 2017-12-28 | Hauling Thomas | Nucleic acid sequencing |
| EP4589017A3 (en) | 2017-10-06 | 2025-10-08 | 10x Genomics, Inc. | Rna templated ligation |
| JP7372927B6 (ja) | 2018-02-12 | 2023-11-27 | ナノストリング テクノロジーズ,インコーポレイティド | 遺伝子およびタンパク質の発現を検出する生体分子プローブおよびその検出方法 |
| AT521238B1 (de) | 2018-05-09 | 2020-02-15 | Lifetaq Analytics Gmbh | In-situ zellanalyse im zellkultursystem |
| US11519033B2 (en) | 2018-08-28 | 2022-12-06 | 10X Genomics, Inc. | Method for transposase-mediated spatial tagging and analyzing genomic DNA in a biological sample |
| WO2020076976A1 (en) | 2018-10-10 | 2020-04-16 | Readcoor, Inc. | Three-dimensional spatial molecular indexing |
| EP3891299A1 (en) | 2018-12-04 | 2021-10-13 | F. Hoffmann-La Roche AG | Spatially oriented quantum barcoding of cellular targets |
| CN113767176A (zh) | 2018-12-10 | 2021-12-07 | 10X基因组学有限公司 | 成像系统硬件 |
| CN113631908A (zh) | 2018-12-21 | 2021-11-09 | 纳米线科技公司 | 用于病理试样的移动数字空间剖析的方法、装置、系统和设备 |
| US11926867B2 (en) | 2019-01-06 | 2024-03-12 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
| US11649485B2 (en) | 2019-01-06 | 2023-05-16 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
| WO2020243579A1 (en) | 2019-05-30 | 2020-12-03 | 10X Genomics, Inc. | Methods of detecting spatial heterogeneity of a biological sample |
| EP3976817A1 (en) | 2019-05-31 | 2022-04-06 | 10X Genomics, Inc. | Method of detecting target nucleic acid molecules |
| KR20220087463A (ko) | 2019-10-18 | 2022-06-24 | 나노스트링 테크놀로지스, 인크. | 발현 프로파일링의 공간적 매핑을 위한 시스템 및 방법 |
| WO2021092433A2 (en) | 2019-11-08 | 2021-05-14 | 10X Genomics, Inc. | Enhancing specificity of analyte binding |
| GB201919032D0 (en) | 2019-12-20 | 2020-02-05 | Cartana Ab | Method of detecting an analyte |
| CN115038794A (zh) | 2019-12-23 | 2022-09-09 | 10X基因组学有限公司 | 在基于分区的测定中使用固定生物样品的组合物和方法 |
| SG11202106899SA (en) | 2019-12-23 | 2021-09-29 | 10X Genomics Inc | Methods for spatial analysis using rna-templated ligation |
| US12365942B2 (en) | 2020-01-13 | 2025-07-22 | 10X Genomics, Inc. | Methods of decreasing background on a spatial array |
| US12405264B2 (en) | 2020-01-17 | 2025-09-02 | 10X Genomics, Inc. | Electrophoretic system and method for analyte capture |
| US11732299B2 (en) | 2020-01-21 | 2023-08-22 | 10X Genomics, Inc. | Spatial assays with perturbed cells |
| US11702693B2 (en) | 2020-01-21 | 2023-07-18 | 10X Genomics, Inc. | Methods for printing cells and generating arrays of barcoded cells |
| US20210230681A1 (en) | 2020-01-24 | 2021-07-29 | 10X Genomics, Inc. | Methods for spatial analysis using proximity ligation |
| US12076701B2 (en) | 2020-01-31 | 2024-09-03 | 10X Genomics, Inc. | Capturing oligonucleotides in spatial transcriptomics |
| US11898205B2 (en) | 2020-02-03 | 2024-02-13 | 10X Genomics, Inc. | Increasing capture efficiency of spatial assays |
| US12110541B2 (en) | 2020-02-03 | 2024-10-08 | 10X Genomics, Inc. | Methods for preparing high-resolution spatial arrays |
| US12110548B2 (en) | 2020-02-03 | 2024-10-08 | 10X Genomics, Inc. | Bi-directional in situ analysis |
| US11732300B2 (en) | 2020-02-05 | 2023-08-22 | 10X Genomics, Inc. | Increasing efficiency of spatial analysis in a biological sample |
| US12129516B2 (en) | 2020-02-07 | 2024-10-29 | 10X Genomics, Inc. | Quantitative and automated permeabilization performance evaluation for spatial transcriptomics |
| US12281357B1 (en) | 2020-02-14 | 2025-04-22 | 10X Genomics, Inc. | In situ spatial barcoding |
| US12399123B1 (en) | 2020-02-14 | 2025-08-26 | 10X Genomics, Inc. | Spatial targeting of analytes |
| US12215379B2 (en) | 2020-02-17 | 2025-02-04 | 10X Genomics, Inc. | In situ analysis of chromatin interaction |
| AU2021225020A1 (en) | 2020-02-21 | 2022-08-18 | 10X Genomics, Inc. | Methods and compositions for integrated in situ spatial assay |
| US11891654B2 (en) | 2020-02-24 | 2024-02-06 | 10X Genomics, Inc. | Methods of making gene expression libraries |
| US12188085B2 (en) | 2020-03-05 | 2025-01-07 | 10X Genomics, Inc. | Three-dimensional spatial transcriptomics with sequencing readout |
| EP4139485B1 (en) | 2020-04-22 | 2023-09-06 | 10X Genomics, Inc. | Methods for spatial analysis using targeted rna depletion |
| AU2021275906A1 (en) | 2020-05-22 | 2022-12-22 | 10X Genomics, Inc. | Spatial analysis to detect sequence variants |
| EP4414459B1 (en) | 2020-05-22 | 2025-09-03 | 10X Genomics, Inc. | Simultaneous spatio-temporal measurement of gene expression and cellular activity |
| US12031177B1 (en) | 2020-06-04 | 2024-07-09 | 10X Genomics, Inc. | Methods of enhancing spatial resolution of transcripts |
| EP4421186B1 (en) | 2020-06-08 | 2025-08-13 | 10X Genomics, Inc. | Methods of determining a surgical margin and methods of use thereof |
| US12209273B2 (en) | 2020-06-12 | 2025-01-28 | 10X Genomics, Inc. | Nucleic acid assays using click chemistry bioconjugation |
| CA3183217A1 (en) * | 2020-06-18 | 2021-12-23 | Jonathan Cheng | Compositions and methods for in situ single cell analysis using enzymatic nucleic acid extension |
| WO2021263111A1 (en) | 2020-06-25 | 2021-12-30 | 10X Genomics, Inc. | Spatial analysis of dna methylation |
| US12209280B1 (en) | 2020-07-06 | 2025-01-28 | 10X Genomics, Inc. | Methods of identifying abundance and location of an analyte in a biological sample using second strand synthesis |
| US11981960B1 (en) | 2020-07-06 | 2024-05-14 | 10X Genomics, Inc. | Spatial analysis utilizing degradable hydrogels |
| US11761038B1 (en) | 2020-07-06 | 2023-09-19 | 10X Genomics, Inc. | Methods for identifying a location of an RNA in a biological sample |
| US12297499B2 (en) | 2020-08-17 | 2025-05-13 | 10X Genomics, Inc. | Multicomponent nucleic acid probes for sample analysis |
| US20220049303A1 (en) | 2020-08-17 | 2022-02-17 | Readcoor, Llc | Methods and systems for spatial mapping of genetic variants |
| US11981958B1 (en) | 2020-08-20 | 2024-05-14 | 10X Genomics, Inc. | Methods for spatial analysis using DNA capture |
| US11926822B1 (en) | 2020-09-23 | 2024-03-12 | 10X Genomics, Inc. | Three-dimensional spatial analysis |
| US12071667B2 (en) | 2020-11-04 | 2024-08-27 | 10X Genomics, Inc. | Sequence analysis using meta-stable nucleic acid molecules |
| US11827935B1 (en) | 2020-11-19 | 2023-11-28 | 10X Genomics, Inc. | Methods for spatial analysis using rolling circle amplification and detection probes |
| US12509717B2 (en) | 2020-12-11 | 2025-12-30 | 10X Genomics, Inc. | Methods and compositions for multimodal in situ analysis |
| AU2021409136A1 (en) | 2020-12-21 | 2023-06-29 | 10X Genomics, Inc. | Methods, compositions, and systems for capturing probes and/or barcodes |
| US12060603B2 (en) | 2021-01-19 | 2024-08-13 | 10X Genomics, Inc. | Methods for internally controlled in situ assays using padlock probes |
| US12275984B2 (en) | 2021-03-02 | 2025-04-15 | 10X Genomics, Inc. | Sequential hybridization and quenching |
| WO2022221425A1 (en) | 2021-04-14 | 2022-10-20 | 10X Genomics, Inc. | Methods of measuring mislocalization of an analyte |
| WO2022236054A1 (en) | 2021-05-06 | 2022-11-10 | 10X Genomics, Inc. | Methods for increasing resolution of spatial analysis |
| JP2024521684A (ja) * | 2021-05-19 | 2024-06-04 | ライカ マイクロシステムズ シーエムエス ゲゼルシャフト ミット ベシュレンクテル ハフツング | 生体試料を分析するためのマーカー、方法および装置 |
| EP4092414B1 (en) * | 2021-05-19 | 2025-01-29 | Leica Microsystems CMS GmbH | Connector, marker and method for analysing biological samples |
| JP2024521683A (ja) * | 2021-05-19 | 2024-06-04 | ライカ マイクロシステムズ シーエムエス ゲゼルシャフト ミット ベシュレンクテル ハフツング | 生体試料を分析するためのマーカー、方法および装置 |
| EP4341671A1 (en) * | 2021-05-19 | 2024-03-27 | Leica Microsystems CMS GmbH | Method for analyzing a biological sample or a chemical compound or a chemical element |
| ES3030033T3 (en) | 2021-06-03 | 2025-06-26 | 10X Genomics Inc | Methods, compositions, kits, and systems for enhancing analyte capture for spatial analysis |
| US12139751B2 (en) | 2021-07-30 | 2024-11-12 | 10X Genomics, Inc. | Circularizable probes for in situ analysis |
| ES2988400T3 (es) | 2021-07-30 | 2024-11-20 | 10X Genomics Inc | Métodos y composiciones para sincronizar reacciones in situ |
| US12391984B2 (en) | 2021-08-03 | 2025-08-19 | 10X Genomics, Inc. | Compositions and methods for rolling circle amplification |
| US12460251B2 (en) | 2021-08-03 | 2025-11-04 | 10X Genomics, Inc. | Stabilization and/or compaction of nucleic acid molecules |
| EP4446426A3 (en) | 2021-08-16 | 2024-11-13 | 10x Genomics, Inc. | Probes comprising a split barcode region and methods of use |
| EP4196605B1 (en) | 2021-09-01 | 2024-12-04 | 10X Genomics, Inc. | Methods for blocking a capture probe on a spatial array |
| WO2023086880A1 (en) | 2021-11-10 | 2023-05-19 | 10X Genomics, Inc. | Methods, compositions, and kits for determining the location of an analyte in a biological sample |
| EP4305195A2 (en) | 2021-12-01 | 2024-01-17 | 10X Genomics, Inc. | Methods, compositions, and systems for improved in situ detection of analytes and spatial analysis |
| US12497653B2 (en) | 2022-01-21 | 2025-12-16 | 10X Genomics, Inc. | Multiple readout signals for analyzing a sample |
| EP4220162A3 (en) * | 2022-02-01 | 2023-10-18 | Leica Microsystems CMS GmbH | Connector, connector-label conjugate and marker for analysing biological samples |
| WO2023167877A1 (en) * | 2022-03-01 | 2023-09-07 | University Of Washington | Apparatuses systems and methods for three dimensional microdissection of samples |
| CN118974836A (zh) | 2022-03-08 | 2024-11-15 | 10X基因组学有限公司 | 将光学拥挤最小化的原位代码设计方法 |
| AU2023237896A1 (en) | 2022-03-24 | 2024-10-17 | Digital Biology Inc. | Tissue spatial omics |
| EP4505177A1 (en) | 2022-04-01 | 2025-02-12 | 10x Genomics, Inc. | Compositions and methods for targeted masking of autofluorescence |
| EP4522769A1 (en) | 2022-05-11 | 2025-03-19 | 10X Genomics, Inc. | Compositions and methods for in situ sequencing |
| US20240035071A1 (en) | 2022-06-17 | 2024-02-01 | 10X Genomics, Inc. | Catalytic de-crosslinking of samples for in situ analysis |
| CN119895052A (zh) | 2022-07-19 | 2025-04-25 | 数码生物公司 | 基于条形码扩散的空间组学 |
| EP4511510B1 (en) | 2022-08-16 | 2025-12-10 | 10X Genomics, Inc. | Ap50 polymerases and uses thereof |
| WO2024041748A1 (en) * | 2022-08-23 | 2024-02-29 | Leica Microsystems Cms Gmbh | Connector, marker, capture construct and data storage device |
| WO2025029831A1 (en) | 2023-07-31 | 2025-02-06 | 10X Genomics, Inc. | Methods and systems for targeted rna cleavage and target rna-primed rolling circle amplification |
Family Cites Families (111)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5320814A (en) | 1991-01-25 | 1994-06-14 | Trustees Of Tufts College | Fiber optic array sensors, apparatus, and methods for concurrently visualizing and chemically detecting multiple analytes of interest in a fluid sample |
| US5543838A (en) | 1993-08-31 | 1996-08-06 | Xerox Corporation | Signal multiplexing system for an image sensor array |
| US5681697A (en) | 1993-12-08 | 1997-10-28 | Chiron Corporation | Solution phase nucleic acid sandwich assays having reduced background noise and kits therefor |
| WO1997007245A1 (en) | 1995-08-14 | 1997-02-27 | Ely Michael Rabani | Methods and devices for parallel multiplex polynucleotide sequencing |
| EP0852004B1 (en) | 1995-10-11 | 2011-01-19 | Luminex Corporation | Multiplexed analysis of clinical specimens |
| US6387707B1 (en) | 1996-04-25 | 2002-05-14 | Bioarray Solutions | Array Cytometry |
| US7144119B2 (en) | 1996-04-25 | 2006-12-05 | Bioarray Solutions Ltd. | System and method for programmable illumination pattern generation |
| US6416960B1 (en) | 1996-08-08 | 2002-07-09 | Prolume, Ltd. | Detection and visualization of neoplastic tissues and other tissues |
| CA2274587A1 (en) | 1996-12-10 | 1998-06-18 | Genetrace Systems Inc. | Releasable nonvolatile mass-label molecules |
| AU6024598A (en) | 1997-01-10 | 1998-08-03 | Pioneer Hi-Bred International, Inc. | Hybridization-based genetic amplification and analysis |
| US20020034737A1 (en) | 1997-03-04 | 2002-03-21 | Hyseq, Inc. | Methods and compositions for detection or quantification of nucleic acid species |
| DE69836734D1 (de) | 1997-02-20 | 2007-02-08 | Univ California | Plasmon-schwingteilchen, methode und vorrichtung |
| US7348181B2 (en) | 1997-10-06 | 2008-03-25 | Trustees Of Tufts College | Self-encoding sensor with microspheres |
| US7115884B1 (en) | 1997-10-06 | 2006-10-03 | Trustees Of Tufts College | Self-encoding fiber optic sensor |
| EP1023464B1 (en) | 1997-10-14 | 2017-07-26 | Luminex Corporation | Precision fluorescently dyed particles and methods of making and using same |
| US6207392B1 (en) | 1997-11-25 | 2001-03-27 | The Regents Of The University Of California | Semiconductor nanocrystal probes for biological applications and process for making and using such probes |
| EP2045334A1 (en) | 1998-06-24 | 2009-04-08 | Illumina, Inc. | Decoding of array sensors with microspheres |
| EP1271154A3 (en) | 1998-09-18 | 2005-08-17 | Massachusetts Institute Of Technology | Biological applications of semiconductor nanocrystals |
| US7079241B2 (en) | 2000-04-06 | 2006-07-18 | Invitrogen Corp. | Spatial positioning of spectrally labeled beads |
| US6465193B2 (en) | 1998-12-11 | 2002-10-15 | The Regents Of The University Of California | Targeted molecular bar codes and methods for using the same |
| US6429027B1 (en) | 1998-12-28 | 2002-08-06 | Illumina, Inc. | Composite arrays utilizing microspheres |
| US6908737B2 (en) | 1999-04-15 | 2005-06-21 | Vitra Bioscience, Inc. | Systems and methods of conducting multiplexed experiments |
| US6355431B1 (en) | 1999-04-20 | 2002-03-12 | Illumina, Inc. | Detection of nucleic acid amplification reactions using bead arrays |
| JP2002544488A (ja) | 1999-05-07 | 2002-12-24 | クアンタム ドット コーポレイション | 半導体ナノクリスタルを用いて分析物を検出する方法 |
| US20020051971A1 (en) | 1999-05-21 | 2002-05-02 | John R. Stuelpnagel | Use of microfluidic systems in the detection of target analytes using microsphere arrays |
| WO2001000875A2 (en) | 1999-06-25 | 2001-01-04 | Motorola, Inc. | Novel methods and products for arrayed microsphere analysis |
| ES2269171T3 (es) | 1999-07-26 | 2007-04-01 | The Government Of The United States Of America, As Represented By The Secretary, Department Of Heal | Dispositivo en capas con regiones de captura para analisis celular. |
| US7214477B1 (en) | 1999-07-26 | 2007-05-08 | The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services | Layered device with capture regions for cellular analysis |
| WO2001018524A2 (en) | 1999-08-30 | 2001-03-15 | Illumina, Inc. | Methods for improving signal detection from an array |
| US7585632B2 (en) | 1999-10-29 | 2009-09-08 | Hologic, Inc. | Compositions and methods for the detection of a nucleic acid using a cleavage reaction |
| WO2001033190A2 (en) | 1999-11-04 | 2001-05-10 | Arcturus Engineering, Inc. | Automated laser capture microdissection |
| WO2001059432A2 (en) | 2000-02-10 | 2001-08-16 | Illumina, Inc. | Array of individual arrays as substrate for bead-based simultaneous processing of samples and manufacturing method therefor |
| US20020028457A1 (en) | 2000-02-16 | 2002-03-07 | Quantum Dot Corporation | Single target counting assays using semiconductor nanocrystals |
| KR20030003686A (ko) | 2000-02-22 | 2003-01-10 | 제노스펙트라 인코포레이티드 | 마이크로어레이 제작 기술 및 장치 |
| US20030186426A1 (en) | 2000-03-15 | 2003-10-02 | The Regents Of The University Of California | Multichannel flow cell for interacting single optically trapped, DNA molecules with different chemical species |
| US7255999B2 (en) | 2001-05-21 | 2007-08-14 | Monogram Biosciences, Inc. | Methods and compositions for analyzing proteins |
| AU2001278133A1 (en) | 2000-08-01 | 2002-02-13 | Surromed, Inc. | Methods for solid phase nanoextraction and desorption |
| US6777244B2 (en) | 2000-12-06 | 2004-08-17 | Hrl Laboratories, Llc | Compact sensor using microcavity structures |
| EP2465943A3 (en) | 2001-03-16 | 2012-10-03 | Kalim Mir | Linear polymer display |
| US7473767B2 (en) | 2001-07-03 | 2009-01-06 | The Institute For Systems Biology | Methods for detection and quantification of analytes in complex mixtures |
| CN1656233A (zh) | 2001-07-15 | 2005-08-17 | 凯克研究生院 | 利用切割剂扩增核酸片段 |
| US20030148335A1 (en) | 2001-10-10 | 2003-08-07 | Li Shen | Detecting targets by unique identifier nucleotide tags |
| US20040229294A1 (en) | 2002-05-21 | 2004-11-18 | Po-Ying Chan-Hui | ErbB surface receptor complexes as biomarkers |
| US20040000519A1 (en) * | 2002-06-28 | 2004-01-01 | Postnova Analytics, Inc. | Field-flow fractionation method and apparatus |
| US20100075858A1 (en) | 2003-04-29 | 2010-03-25 | Genvault Corporation | Biological bar code |
| US20050048498A1 (en) | 2003-08-29 | 2005-03-03 | Applera Corporation | Compositions, methods, and kits for assembling probes |
| US20070016052A1 (en) | 2003-09-24 | 2007-01-18 | Matsushita Electric Industrial Co., Ltd. | Ultrasonic diagnostic apparatus |
| US7402399B2 (en) | 2003-10-14 | 2008-07-22 | Monogram Biosciences, Inc. | Receptor tyrosine kinase signaling pathway analysis for diagnosis and therapy |
| EP1725572B1 (de) | 2003-11-05 | 2017-05-31 | AGCT GmbH | Makromolekulare nukleotidverbindungen und methoden zu deren anwendung |
| US7569392B2 (en) | 2004-01-08 | 2009-08-04 | Vanderbilt University | Multiplex spatial profiling of gene expression |
| US7295026B2 (en) * | 2005-06-03 | 2007-11-13 | Ut-Battelle, Llc | Automated position control of a surface array relative to a liquid microjunction surface sampler |
| EP2322921B1 (en) | 2005-06-07 | 2014-08-06 | Centre National de la Recherche Scientifique (CNRS) | DNTP conjugated to peptide via a UV cleavable linker |
| EP2500439B2 (en) | 2005-06-20 | 2017-08-16 | Advanced Cell Diagnostics, Inc. | kits and products for detecting nucleic acids in individual cells and of identifying rare cells from large heterogeneous cell populations. |
| GB0522310D0 (en) | 2005-11-01 | 2005-12-07 | Solexa Ltd | Methods of preparing libraries of template polynucleotides |
| CA2640385C (en) | 2005-12-23 | 2014-07-15 | Nanostring Technologies, Inc. | Nanoreporters and methods of manufacturing and use thereof |
| WO2007076132A2 (en) | 2005-12-23 | 2007-07-05 | Nanostring Technologies, Inc. | Compositions comprising oriented, immobilized macromolecules and methods for their preparation |
| CA2653095C (en) | 2006-05-22 | 2013-07-16 | Nanostring Technologies, Inc. | Systems and methods for analyzing nanoreporters |
| WO2008021202A2 (en) * | 2006-08-11 | 2008-02-21 | The Regents Of The University Of California | Capillary-based cell and tissue acquisition system (ctas) |
| US7741045B2 (en) | 2006-11-16 | 2010-06-22 | General Electric Company | Sequential analysis of biological samples |
| US8003312B2 (en) | 2007-02-16 | 2011-08-23 | The Board Of Trustees Of The Leland Stanford Junior University | Multiplex cellular assays using detectable cell barcodes |
| US7728287B2 (en) | 2007-03-01 | 2010-06-01 | Lawrence Livermore National Security, Llc | Imaging mass spectrometer with mass tags |
| WO2008124847A2 (en) * | 2007-04-10 | 2008-10-16 | Nanostring Technologies, Inc. | Methods and computer systems for identifying target-specific sequences for use in nanoreporters |
| US8906700B2 (en) | 2007-11-06 | 2014-12-09 | Ambergen, Inc. | Methods and compositions for phototransfer |
| GB0811574D0 (en) | 2008-06-24 | 2008-07-30 | Trillion Genomics Ltd | Characterising planar samples by mass spectrometry |
| CA2731781A1 (en) * | 2008-07-21 | 2010-01-28 | Neodiagnostix, Inc. | Methods for the cytological analysis of cervical cells |
| EP2331704B1 (en) | 2008-08-14 | 2016-11-30 | Nanostring Technologies, Inc | Stable nanoreporters |
| EP2163900A1 (en) | 2008-09-04 | 2010-03-17 | Commissariat A L'energie Atomique | New method of imaging by mass spectrometry and new mass tag associated trityl derivatives |
| US8309306B2 (en) | 2008-11-12 | 2012-11-13 | Nodality, Inc. | Detection composition |
| DE102008062372B3 (de) | 2008-12-17 | 2010-06-17 | Medizinische Hochschule Hannover | Nachweiskonjugat und Verfahren zur Analyse |
| WO2010081114A2 (en) | 2009-01-12 | 2010-07-15 | 20/20 Genesystems, Inc. | Oligonucleotide-coated affinity membranes and uses thereof |
| SG172983A1 (en) | 2009-01-15 | 2011-08-29 | Lab Corp America Holdings | Methods of determining patient response by measurement of her-3 |
| WO2010115089A2 (en) | 2009-04-03 | 2010-10-07 | University Of Virginia Patent Foundation | Serial multiple antigen colocalization in paraffin-embedded tissue |
| US20130023433A1 (en) * | 2009-09-28 | 2013-01-24 | Yuling Luo | Methods of detecting nucleic acid sequences with high specificity |
| EP3236264A3 (en) * | 2009-10-13 | 2017-11-08 | Nanostring Technologies, Inc | Protein detection via nanoreporters |
| HRP20151294T1 (hr) | 2010-04-05 | 2016-03-11 | Prognosys Biosciences, Inc. | Biološka testiranja sa prostornim kodiranjem |
| EP2670863B1 (en) | 2011-01-31 | 2018-06-27 | H. Hoffnabb-La Roche Ag | Methods of identifying multiple epitopes in cells |
| GB201106254D0 (en) | 2011-04-13 | 2011-05-25 | Frisen Jonas | Method and product |
| KR102085242B1 (ko) | 2011-05-17 | 2020-03-05 | 디엑스테리티 다이아그노스틱스 인코포레이티드 | 표적 핵산 검출을 위한 방법 및 조성물 |
| EP2814984A4 (en) | 2012-02-14 | 2015-07-29 | Univ Johns Hopkins | MIRNA ANALYSIS PROCEDURE |
| JP6525872B2 (ja) | 2012-08-08 | 2019-06-05 | エフ.ホフマン−ラ ロシュ アーゲーF. Hoffmann−La Roche Aktiengesellschaft | 細胞中の複数のエピトープを同定するためのダイナミックレンジを高めること |
| CN104769127A (zh) | 2012-08-14 | 2015-07-08 | 10X基因组学有限公司 | 微胶囊组合物及方法 |
| EP3511423B2 (en) | 2012-10-17 | 2024-05-29 | Spatial Transcriptomics AB | Methods and product for optimising localised or spatial detection of gene expression in a tissue sample |
| CA2888304A1 (en) | 2012-10-26 | 2014-05-01 | Fluidigm Canada Inc. | Sample analysis by mass cytometry |
| WO2014063247A1 (en) | 2012-10-26 | 2014-05-01 | Fluidigm Canada Inc. | Cell analysis by mass cytometry |
| KR101969847B1 (ko) | 2012-10-30 | 2019-04-17 | 삼성전자주식회사 | 동일 검체에서 여러 항원을 검출하기 위한 순차적 다중 면역염색법 |
| CN108753766A (zh) | 2013-02-08 | 2018-11-06 | 10X基因组学有限公司 | 多核苷酸条形码生成 |
| JP6605452B2 (ja) | 2013-04-30 | 2019-11-13 | カリフォルニア インスティチュート オブ テクノロジー | 逐次ハイブリダイゼーションバーコーディングによる分子の多重標識化 |
| AU2014278537B2 (en) * | 2013-06-12 | 2018-04-19 | The General Hospital Corporation | Methods, kits, and systems for multiplexed detection of target molecules and uses thereof |
| CA2914816A1 (en) | 2013-06-14 | 2014-12-18 | Nanostring Technologies, Inc. | Multiplexable tag-based reporter system |
| US10041949B2 (en) | 2013-09-13 | 2018-08-07 | The Board Of Trustees Of The Leland Stanford Junior University | Multiplexed imaging of tissues using mass tags and secondary ion mass spectrometry |
| US9322051B2 (en) | 2013-10-07 | 2016-04-26 | General Electric Company | Probing of biological samples |
| WO2015073711A1 (en) | 2013-11-13 | 2015-05-21 | Nugen Technologies, Inc. | Compositions and methods for identification of a duplicate sequencing read |
| JP6818268B2 (ja) * | 2014-01-29 | 2021-01-20 | Kmバイオロジクス株式会社 | 抗トランスサイレチンヒト化抗体 |
| AU2015222268B2 (en) | 2014-02-26 | 2017-06-29 | Ventana Medical Systems, Inc. | Photo-selective method for biological sample analysis field |
| CA2943617C (en) | 2014-04-02 | 2022-11-01 | The Board Of Trustees Of The Leland Stanford Junior University | An apparatus and method for sub-micrometer elemental image analysis by mass spectrometry |
| CN106413896B (zh) | 2014-04-10 | 2019-07-05 | 10X基因组学有限公司 | 用于封装和分割试剂的流体装置、系统和方法及其应用 |
| CA2945816A1 (en) * | 2014-04-15 | 2015-10-22 | University Of Virginia Patent Foundation | Isolated t cell receptors and methods of use therefor |
| US9909167B2 (en) | 2014-06-23 | 2018-03-06 | The Board Of Trustees Of The Leland Stanford Junior University | On-slide staining by primer extension |
| EP3223865A4 (en) * | 2014-10-31 | 2018-10-03 | Jounce Therapeutics, Inc. | Methods of treating conditions with antibodies that bind b7-h4 |
| US9975122B2 (en) | 2014-11-05 | 2018-05-22 | 10X Genomics, Inc. | Instrument systems for integrated sample processing |
| CN107208144B (zh) | 2014-11-21 | 2021-06-08 | 纳米线科技公司 | 无酶且无扩增的测序 |
| CN120425026A (zh) | 2015-04-10 | 2025-08-05 | 十程基因技术瑞典公司 | 生物样本的空间区别、多重核酸分析 |
| US10501777B2 (en) | 2015-07-17 | 2019-12-10 | Nanostring Technologies, Inc. | Simultaneous quantification of a plurality of proteins in a user-defined region of a cross-sectioned tissue |
| CN108350486B (zh) | 2015-07-17 | 2021-09-03 | 纳米线科技公司 | 在横切面组织的用户定义区域中的基因表达的同时定量 |
| CA3242290A1 (en) | 2015-07-27 | 2017-02-02 | Illumina, Inc. | Spatial mapping of nucleic acid sequence information |
| US10357770B2 (en) * | 2015-10-09 | 2019-07-23 | International Business Machines Corporation | Microfluidic probe for modulating insertion of liquid spacers |
| WO2018026873A1 (en) | 2016-08-01 | 2018-02-08 | California Institute Of Technology | Sequential probing of molecular targets based on pseudo-color barcodes with embedded error correction mechanism |
| GB201619458D0 (en) | 2016-11-17 | 2017-01-04 | Spatial Transcriptomics Ab | Method for spatial tagging and analysing nucleic acids in a biological specimen |
| KR102695749B1 (ko) | 2016-11-21 | 2024-08-14 | 나노스트링 테크놀로지스, 인크. | 화학적 조성물 및 이것을 사용하는 방법 |
| JP7372927B6 (ja) | 2018-02-12 | 2023-11-27 | ナノストリング テクノロジーズ,インコーポレイティド | 遺伝子およびタンパク質の発現を検出する生体分子プローブおよびその検出方法 |
| SG11202106899SA (en) | 2019-12-23 | 2021-09-29 | 10X Genomics Inc | Methods for spatial analysis using rna-templated ligation |
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