EP0376163B1 - DNA having lactate oxidase genetic information - Google Patents

DNA having lactate oxidase genetic information Download PDF

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Publication number
EP0376163B1
EP0376163B1 EP89123676A EP89123676A EP0376163B1 EP 0376163 B1 EP0376163 B1 EP 0376163B1 EP 89123676 A EP89123676 A EP 89123676A EP 89123676 A EP89123676 A EP 89123676A EP 0376163 B1 EP0376163 B1 EP 0376163B1
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Prior art keywords
dna
lactate oxidase
mole
lactic acid
transformant
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EP89123676A
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German (de)
English (en)
French (fr)
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EP0376163A3 (en
EP0376163A2 (en
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Hitoshi Sagai
Keiko Nogata
Hideo Misaki
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Asahi Kasei Corp
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Asahi Chemical Industry Co Ltd
Asahi Kasei Kogyo KK
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0006Oxidoreductases (1.) acting on CH-OH groups as donors (1.1)

Definitions

  • a novel DNA encoding a polypeptide constituting a lactate oxidase which is an enzyme catalyzing the reaction producing 1 mole of pyruvic acid and 1 mole of hydrogen peroxide from 1 mole of L-lactic acid and 1 mole of oxygen.
  • the invention also relates to a process for producing lactate oxidase by the use of the DNA gene.
  • lactate oxidases having lactic acid as a substrate reported heretofore are enzymes which catalyze an enzymatic reaction producing 1 mole of pyruvic acid and 1 mole of hydrogen peroxide from 1 mole of L-lactic acid and 1 mole of oxygen according the following reaction scheme: L-lactic acid + O2 ⁇ Pyruvic acid + H2O2
  • the enzymes have been known to exist in microorganisms which belong to the genera of Pediococcus , Streptococcus , Aerococcus or the like (Japanese Patent Publication Nos. 4557/1983, 10190/1984, etc.).
  • lactate oxidases combine with an FAD (flavin adenine dinucleotide) which is a prosthetic group, and express their enzyme activities in a form of a holoenzyme. Since lactate oxidases have lactic acid as their substrate, they can be used for quantitative analysis or purity determination of lactic acid in body fluids such as serum, in various pharmaceutical products containing lactate, in lactic acid fermentation products or in lactic acid reagents. They can also be used for measurements of enzyme activities which are directly or indirectly involved in the production or use of lactic acid, as well as for the elimination of lactic acid in serum. Lactate oxidases are thus very important enzymes.
  • lactate oxidase Besides the lactate oxidases discussed above, there have been other enzymes known by the name "lactate oxidase". They are, for example, L-lactate:oxygen oxidoreductase (Enzyme No. 1.1.3.2) derived from Mycobacterium phrei [E. Berman, Enzyme Handbook , vol. 1, 111; Splinger-Verlag Berlin Heidelberg, New York, (1969)] or derived from Mycobacterium avium [ Nature, 170 , 207 (1952)]. Such an enzyme, different from the lactate oxidase of the present invention, catalyses a reaction producing acetic acid, carbon dioxide and water according to the following formula.
  • lactate oxidase L-lactate:oxygen oxidoreductase (Enzyme No. 1.1.3.2) derived from Mycobacterium phrei [E. Berman, Enzyme Handbook , vol. 1, 111; Splinger-Verlag Berlin Heidelberg,
  • lactate oxidase designates an enzyme catalyzing an enzymatic reaction producing 1 mole of pyruvic acid and 1 mole of hydrogen peroxide from 1 mole of L-lactic acid and 1 mole of oxygen.
  • Lactate oxidase-producing microorganisms reported heretofore yield only a poor lactate oxidase-producing capability.
  • a high purification cost is involved in order to obtain a high purity lactate oxidase.
  • the use of these lactate oxidase-producing microorganisms therefore, have not always been an effective and convenient source for providing lactate oxidase as reagents for abundant use in laboratory experiments or clinical diagnoses.
  • the present inventors have undertaken extensive studies, including screening of high productivity microorganisms and improvement of lactate oxidase producing stocks, in order to improve the productivity of lactate oxidase and to reduce the production cost.
  • the inventors have succeeded in determining the primary structure of a DNA gene coding for lactate oxidase and in predicting the primary structure of the polypeptide constituting the enzyme.
  • the inventors further succeeded in obtaining a transformant possessing a vector into which at least the DNA is inserted.
  • the inventors subsequently succeeded in establishing a process for producing the lactate oxidase by culturing the transformant. Such a finding has led to the completion of the present invention.
  • an object of the present invention is to provide a DNA comprising a base sequence encoding an amino acid sequence of a polypeptide constituting a lactate oxidase which is an enzyme catalyzing the reaction producing 1 mole of pyruvic acid and 1 mole of hydrogen peroxide from 1 mole of L-lactic acid and 1 mole of oxygen.
  • Still another object of this invention is to provide a vector comprising the DNA, a transformant carrying the vector having a DNA which is foreign with respect to a host microorganism, a polypeptide constituting said lactate oxidase and encoding an amino acid sequence given in Figure 1 starting from the N-terminal: Still another object of this invention is to provide a process for preparing a lactate oxidase comprising: culturing a transformant carrying the vector having a DNA which is foreign with respect to a host microorganism, causing said transformant to express the genetic information of said DNA, and collecting said lactate oxidase from the culture broth.
  • Figure 1 is the amino acid sequence encoding the polypeptide constituting the lactate oxidase produced in Example 4.
  • Figure 2 is the base sequence of the DNA produced in Example 4.
  • Figure 3 is a restriction endoneuclease map of the plasmid pOXI8.
  • the lactate oxidase of this invention causes a novel DNA gene coding for an amino acid sequence of a polypeptide constituting the lactate oxidase (such a DNA is hereinafter referred to as "a lactate oxidase gene” or "a lactate oxidase DNA”) to express and to become an active lactate oxidase through coexistence with FDA, which is a prosthetic group.
  • the enzyme has an activity of catalyzing the reaction producing 1 mole of pyruvic acid and 1 mole of hydrogen peroxide from 1 mole of L-lactic acid and 1 mole of oxygen.
  • lactate oxidase-producing microorganisms capable of producing lactate oxidase can be used as a lactate oxidase gene-donating microorganism for the purpose of this invention. They are selected from lactate oxidase-producing microorganisms belonging to the genera Pediococcus , Streptococcus , Aerococcus , and like. Given as specific examples of preferable microorganisms are Pediococcus sp. B-0667 (FERM BP-465), Streptococcus sp.
  • Aerococcus viridans IFO 12219 is Aerococcus viridans IFO 12219.
  • the method of isolating the DNA derived from the gene-donating microorganism is now exemplified.
  • Any one of the above-mentioned gene-donating microorganisms is first cultured in a liquid culture medium under aeration for 1 to 3 days.
  • the broth thus cultured is subjected to centrifugation to collect the microorganism, which is then lysed to produce a bacteriolysate containing a lactate oxidase gene.
  • the treatment using a cell wall lysing enzyme such as lysozyme or ⁇ -glucanase is used for the bacteriolysis, in combination, as required, with other enzymes such as protease or a surface active agent such as sodium laurylsulfate.
  • physical destruction of cell walls by means of freeze-thawing or French press may be employed together with the bacteriolysis.
  • Digestion of the DNA isolated from the microorganism can be carried out by means of treatment with ultrasonic waves or a restriction endoneuclease, for instance.
  • a restriction endoneuclease is preferable, especially type II enzymes such as EcoRI, HindIII and BamHI, which can act at specific nucleotide sequences.
  • Desirable vectors employed are those reconstructed for use as a genetic recombination through artificial treatment of a phage or a plasmid DNA which is capable of replicating autonomously in host bacterial cells.
  • Escherichia coli is used as a host microorganism, for example, ⁇ gt. ⁇ C, ⁇ gt. ⁇ B or the like is used as a phage.
  • pBR322, pBR325, pACYC184, pUC12, pUC13, pUC18, pUC19 or the like is used when Escherichia coli is a host microorganism; pUB110, pC194 or the like is used when Bacillus subtillis is a host microorganism; and YRp7, pYC1, YEp13, pJDB, YIp1 or the like is used when Saccharomyces cerevisiae is a host microorganism.
  • shuttlevectors which can autonomously replicate in two or more host bacterial cells, for instance, both in Escherichia coli and Saccharomyces cerevisiae , can be employed. These vectors are desirably digested into linear vector fragments by the use of the same restriction endoneuclease as that used in cleaving the above-mentioned lactate oxidase gene-donating microorganism DNA.
  • a conventional method of using a DNA ligase can be employed for joining the bacterial DNA and the vector fragment. For instance, cohesive ends of the bacterial DNA and those of the vector fragment are first annealed, and then a recombinant DNA can be prepared from the bacterial DNA fragment and the vector fragment by the action of a suitable DNA ligase. If required, the annealed bacterial DNA-vector fragment is introduced into the host microorganism to produce the recombinant DNA with the aid of intracellular DNA ligase.
  • Any microorganism which allows autonomic and stable replication of the recombinant DNA and is capable of expressing the character of the foreign DNA can be used as a host bacterium.
  • a microorganism include those belonging to Escherichia coli such as Escherichia coli DH1, Escherichia coli HB101, Escherichia coli W3110, Escherichia coli C600 and the like; those belonging to Bacillus subtillis such as Bacillus subtillis 207-25 [ Gene , 34 , 1-8 (1985)], Bacillus subtillis 207-21 [ Journal of Biochemistry, 95 , 87-93 (1984)], Bacillus subtillis BD170 [ Nature , 293 , 481-483 (1981)], Bacillus subtillis M (ATCC 6051) and the like; and those belonging to Saccharomyces cerevisiae such as Saccharomyces cerevisiae AH-22 [ Gene, 39 , 117-120 (1985)],
  • Introducing the recombinant DNA into the host microorganism may be performed in the presence of calcium ion when a host microorganism is a bacterium belonging to the genus Escherichia .
  • a host microorganism is a bacterium belonging to the genus Escherichia .
  • a bacterium belonging to the genus Bacillus is used as a host microorganism, either the competent cell method or the protoplast method can be used.
  • the micro-injection method is also acceptable.
  • Introducing the objective DNA into the host microorganism can be detected by means of selection of the microorganism which can express a drug resistance marker of the vector on which the objective recombinant DNA is held as well as lactate oxidase activity at the same time. For instance, those bacteria which grow in a selective culture medium of the drug resistance marker and which produce a polypeptide constituting the lactate oxidase can be selected.
  • the recombinant DNA possessing said lactate oxidase gene once selected in this manner may be easily isolated from the transformant for introduction into another host bacterium.
  • the lactate oxidase gene DNA can be digested using a restriction endoneuclease or the like from a recombinant DNA possessing a lactate oxidase gene, and is joined with a terminal of other linearized vector obtained in a similar manner.
  • the recombinant DNA with novel characteristics thus prepared is then introduced into other host microorganism.
  • a DNA coding lactate oxidase mutein which possesses a substantial lactate oxidase activity is a variant gene produced by the genetic engineering technique from a lactate oxidase gene according to this invention.
  • This mutated gene can be obtained by means of various genetic engineering techniques such as the site specific mutagenesis, the substitution of a specific DNA fragment with an artificial mutated gene or the like.
  • those having particularly excellent characteristics are finally inserted into a vector to produce a recombinant DNA, which is then introduced into a host microorganism.
  • the lactate oxidase mutein can then be produced.
  • Escherichia coli DH1.pOXI8 (FERM BP-2173).
  • This strain is prepared by inserting a DNA, which is prepared from Aerococcus viridans IFO 12219 and coding for lactate oxidase, into plasmid pACYC184, and introducing this plasmid into a host microorganism.
  • the base sequence of the lactate oxidase gene prepared by the method described above can be determined by the dideoxy method [ Science, 214 , 1205-1210 (1981)].
  • the base sequence of a gene in a plasmid constructed using a microorganism belonging to genus Aerococcus as a lactate oxidase gene-donating microorganism and Escherichia coli as a host microorganism is represented by Figure 2.
  • the upstream nucleotide sequence of the AAT which codes Asn at position 1 of N-terminal may be any codon for an amino acid, and it may be one or more codons encoding an amino acid.
  • a preferable example is ATG, an initiation codon other than ATG, or a polydeoxyribonucleotide corresponding to a signal peptide.
  • the downstream nucleotide sequence of ATC representing Tyr at the C-terminal may be a translational termination codon or any codon coding for an amino acid.
  • This 3′-end may further have one or more codons encoding an amino acid, provided that in this case it is desirable that an additional translational termination codon be present at the 3′-end of these codons.
  • the determination of the lactate oxidase DNA of the present invention ensures cloning of the target lactate oxidase-structural gene by the colony hybridization method.
  • a DNA fragment encoding the lactate oxidase obtained by the present invention is first extracted, labeled with 32P or the like, and subjected to colony hybridization.
  • Cloning of the target lactate oxidase gene can be performed by the selection of a colony carring a plasmid containing the lactate oxidase gene from among the gene library prepared from the lactate oxidase DNA-donating microorganism cells.
  • the amino acid sequence of the polypeptide produced through the expression of the DNA of this invention can be predicted from the base sequence of the DNA.
  • the amino acid sequence of the portion constituting the N-terminal of said polypeptide can be determined through the method discussed below.
  • a lactate oxidase gene-donating microorganism capable of producing lactate oxidase is first cultured in a nutrient medium to produce and accumulate lactate oxidase in the cells.
  • the cultured cells are collected from the broth by filtration, centrifugation, or the like means.
  • the collected cells are then destroyed either by a mechanical means or an enzymatic means using lysozyme or the like, and to the lysate EDTA and/or a suitable surface active agent are added, as required, to solubilize and separate lactate oxidase as an aqueous solution.
  • This aqueous solution of lactate oxidase is then condensed or, without being condensed, subjected to ammonium sulfate fractionation, gel filtration, adsorption chromatography, or ion exchange chromatography to obtain a high-purity lactate oxidase.
  • the partial amino acid sequence the N-terminal of this highly purified lactate oxidase is determined using a liquid phase protein sequencer (Beckman System 890ME, manufactured by Beckman, Inc.). In this manner, it was confirmed that the amino acid sequence of said portion was identical to the N-terminal amino acid sequence predicted from analyzing a lactate oxidase gene obtained by a genetic engineering technique. In the amino acid sequence shown in Figure 1, it does not matter that there may be one or more amino acids at upstream of N-terminal Asn.
  • the amino acid sequence determined in this way from the base sequence of Figure 2 is that shown in Figure 1.
  • the lactate oxidase of the present invention is assumed to be a dimer of said polypeptide.
  • a preferred example is a hydrogen atom, a Met or a signal polypeptide.
  • the downstream of Tyr at the C-terminal may be free, or there may be an acid amide or one or more amino acid residues.
  • the transformant thus obtained when cultured in a nutrient medium, can produce a large amount of lactate oxidase stably.
  • Suitable culturing conditions of transformant are determined taking the nutrient-physiological characteristics of the microorganism into consideration. In most cases, liquid culturing is employed. In industrial scale production, however, culturing under deep aerobic stirring is more advantageous.
  • a wide variety of nutrients conventionally used for culturing bacteria can be used for culturing the transformant.
  • any nutritious carbon compounds can be used as carbon sources, including, for example, glucose, sucrose, lactose, maltose, fructose, molasses, and the like.
  • nitrogen sources any available nitrogen compounds can be employed, including peptones, meat extracts, yeast extracts, casein hydrolysates and the like.
  • a culturing temperature may be changed in a range within which the microorganism can grow and produce lactate oxidase.
  • the preferable temperature range is 20-42°C for Escherichia coli.
  • the culturing time may be varied to some degree depending on the culturing conditions. Basically, the culturing is terminated at the time when the yield of lactate oxidase reaches maximum. In usual practice, it takes about 12-48 hours. It is possible to change the pH of the culture media within the range in which the bacteria can grow and produce lactate oxidase.
  • the especially preferable pH range is about 6.0-8.0.
  • Lactate oxidase may be served for use in the form of culture broth as it contains cells.
  • the lactate oxidase contained in the culture broth is generally used after separation of the cells therefrom by filtration, centrifugation or the like means.
  • lactate oxidase is contained in the cells, the cells are first separated by means of filtration or centrifugation.
  • the collected cells are then digested either by a mechanical means or an enzymatic means using lysozyme or the like, and to the digested bacteria are added a chelating agent such as EDTA and/or a suitable surface active agent, as required, to solubilize lactate oxidase.
  • a chelating agent such as EDTA and/or a suitable surface active agent
  • the solutions containing lactate oxidase thus obtained are then condensed by evaporation under reduced pressure or by the use of a filter, and subjected to a salting-out treatment with ammonium sulfate, sodium sulfate or the like, or to fractional precipitation using a hydrophilic organic solvent such as methanol, ethanol, acetone or the like.
  • the precipitate is dissolved into water, and the solution is dialyzed through a cellulase membrane to eliminate low molecular weight impurities.
  • the precipitate is purified by means of gel filtration, adsorption chromatography, ion-exchange chromatography or the like.
  • a purified lactate oxidase powder is produced from the solution containing lactate oxidase obtained by the use of these various means through vacuum evaporation, lyophilization or the like.
  • amino acids amino acids, peptides, nucleic acids, and nucleic acid-related compounds are abbreviated according to the standard prevailing in the field. Some examples of the abbreviations are listed below. Also, all designations of amino acids denote the L-isomers.
  • a chromosomal DNA was prepared from Aerococcus viridans (IFO 12219) by the following method.
  • the strain was cultured with shaking in 150 ml of a normal bouillon medium containing 0.5% sodium thiosulfate at 37°C overnight.
  • the culture broth was centrifuged at 3,000 rpm for 10 minutes to collect cells.
  • the cells were suspended into 5 ml of a solution containing 10% sucrose, 50 mM Tris-HCl (pH 8.0), and 50 mM EDTA.
  • the DNA separated in this manner was dissolved into 10 ml of a solution containing 10 mM Tris-HCl (pH 8.0) and 1 mM EDTA (Such a solution is hereinafter referred to as "TE".).
  • This solution was treated with an equal volume of a chloroform-phenol (1:1) mixed solvent, and was again centrifuged to recover the water layer. A two-fold volume of ethanol was further added to this, and the DNA was again separated from the mixture in the same manner as described above. This finally obtained DNA was dissolved into 2 ml of TE.
  • the broth was centrifuged at 3,000 rpm for 10 minutes to collect bacterial cells, from which the plasmid DNA was prepared according to the lysozyme-SDS method and the cesium chloride-ethidium bromide method [Maniatis et al, Molecular Cloning, 86-94, Cold Spring Harbor (1982)].
  • the plasmid carried by the strain was separated in the same manner as in Example 2.
  • This plasmid containing lactate oxidase gene and PACYC184 gene was named pOXI8.
  • First Solution Peroxidase (50 U/ml) 0.1 ml 0.2 M 3,3-dimethylglutalate-NaOH buffer (pH 6.5) 0.2 15 mM 4-aminoantipyrine 0.1 0.5 M DL-lactic acid (pH 6.5) 0.1 Water 0.3 Total 0.8 ml Second solution: 0.2% N,N-dimethylaniline Termination Solution: 0.25% sodium laurylbenzene sulfate The first solution (0.8 ml) and the second solution (0.2 ml) were mixed and pre-incubated at 37°C for 3 minutes. To this 20 »l of an enzyme solution was added and incubated at 37°C for 10 minutes. Then, 2.0 ml of the termination solution was added to terminate the reaction.
  • the resulting purple color was colorimetrically measured at a wave length of 565 nm.
  • One unit (u) of the enzyme activity is defined as the amount of enzyme which generates 1.0 »mol of H2O2 per minute at 37°C under the conditions specified in assay procedure.
  • the following equation is followed upon calculation of enzymatic activity (potency) by this measurement method of enzymatic activity.
  • pOXI8 DNA plasmid was prepared from Escherichia coli DH1 pOXI8 in the same manner as the preparation of pACYC184.
  • a pOXI8 DNA cleavage map was prepared using restriction endoneucleases EcoRV, HpaI, MluI, ScaI, PstI, XbaI and XhoI (all produced by Takara Shuzo Co., Ltd.). The results are shown in Figure 3.
  • the base sequence of the DNA containing lactate oxidase gene was determined according to the Dideoxy Method using M13 phage [ Science, 214 , 1205 - 1210 (1981)].
  • the base sequence of lactate oxidase gene and the amino acid sequence of the lactate oxidase are as shown in Figures 2 and 1, respectively.
  • Escherichia coli DH1 pOXI8 was cultured in 20 liters of BHI medium at 37°C for 18 hours using a 30-liter jar fermenter. The culture cells were collected by centrifugation at 5,000 rpm for 10 minutes. The cells were washed with 2 liters of physiological saline and suspended into 2 liters of 10 mM phosphate buffer (pH 7.0). To the suspension thus prepared were added 1 mg of lysozyme, 1 ml of 2 mM EDTA-2Na, and TritonX-100 in an amount at a final concentration of 0.1%. After incubation at 37°C for 30 minutes with stirring, the mixture was centrifuged at 5,000 rpm for 10 minutes to separate the resulting supernatant.

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EP89123676A 1988-12-29 1989-12-21 DNA having lactate oxidase genetic information Expired - Lifetime EP0376163B1 (en)

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JP63334628A JP2942564B2 (ja) 1988-12-29 1988-12-29 乳酸オキシダーゼの遺伝情報を有するdnaおよびその用途
JP334628/88 1988-12-29

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EP0376163A2 EP0376163A2 (en) 1990-07-04
EP0376163A3 EP0376163A3 (en) 1990-08-16
EP0376163B1 true EP0376163B1 (en) 1994-07-20

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JP4367616B2 (ja) 2003-10-21 2009-11-18 日本電気株式会社 耐熱性乳酸酸化酵素
BR112012008380A2 (pt) * 2009-09-11 2015-09-08 Dsm Ip Assets Bv preparação de ácido alfa-cetopimélico.
JP5593689B2 (ja) * 2009-12-09 2014-09-24 東洋紡株式会社 乳酸オキシダーゼ組成物
CN116083382B (zh) * 2022-12-29 2024-01-23 华东理工大学 一种表达乳酸氧化酶的益生菌工程菌及其表达产品和应用

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US4166763A (en) * 1976-12-10 1979-09-04 Eastman Kodak Company Analysis of lactic acid or lactate using lactate oxidase
JPS5910190A (ja) * 1982-07-05 1984-01-19 Toshiba Corp 圧延機の速度補償装置
EP0274425B1 (en) * 1987-01-06 1993-12-15 Asahi Kasei Kogyo Kabushiki Kaisha Pyruvate oxidase, its preparation and use

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Title
CHEMICAL ABSTRACTS, vol. 112, no. 1, 1 January-1990, abstract no. 3217t, Columbus, Ohio, US; John D. DUNCAN et al. *
PATENT ABSTRACTS OF JAPAN, vol. 10, no. 182 (C-356), 25 June 1986 *
PATENT ABSTRACTS OF JAPAN, vol. 10, no. 345 (C-386), 20 November 1986 *

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DE68916926T2 (de) 1995-02-16
EP0376163A3 (en) 1990-08-16
JP2942564B2 (ja) 1999-08-30
EP0376163A2 (en) 1990-07-04
DE68916926D1 (de) 1994-08-25
ATE108827T1 (de) 1994-08-15
JPH02177886A (ja) 1990-07-10

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