DK2558575T3 - METHODS FOR GENERATION OF endogenous MARK PROTEIN. - Google Patents

METHODS FOR GENERATION OF endogenous MARK PROTEIN. Download PDF

Info

Publication number
DK2558575T3
DK2558575T3 DK11769489.3T DK11769489T DK2558575T3 DK 2558575 T3 DK2558575 T3 DK 2558575T3 DK 11769489 T DK11769489 T DK 11769489T DK 2558575 T3 DK2558575 T3 DK 2558575T3
Authority
DK
Denmark
Prior art keywords
sequence
cell
protein
tag
endogenous
Prior art date
Application number
DK11769489.3T
Other languages
Danish (da)
English (en)
Inventor
Dmitry Malkov
Nathan Zenser
Deborah Vassar
Fan Zhang
Hongyi Zhang
Original Assignee
Sigma Aldrich Co Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sigma Aldrich Co Llc filed Critical Sigma Aldrich Co Llc
Application granted granted Critical
Publication of DK2558575T3 publication Critical patent/DK2558575T3/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • C07K14/4701Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals not used
    • C07K14/4702Regulators; Modulating activity
    • C07K14/4705Regulators; Modulating activity stimulating, promoting or activating activity
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/87Introduction of foreign genetic material using processes not otherwise provided for, e.g. co-transformation
    • C12N15/90Stable introduction of foreign DNA into chromosome
    • C12N15/902Stable introduction of foreign DNA into chromosome using homologous recombination
    • C12N15/907Stable introduction of foreign DNA into chromosome using homologous recombination in mammalian cells
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • G01N33/5008Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • G01N33/502Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects
    • G01N33/5035Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects on sub-cellular localization
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • G01N33/5008Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • G01N33/502Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects
    • G01N33/5041Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects involving analysis of members of signalling pathways
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/58Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
    • G01N33/582Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/60Fusion polypeptide containing spectroscopic/fluorescent detection, e.g. green fluorescent protein [GFP]
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/70Fusion polypeptide containing domain for protein-protein interaction
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/70Fusion polypeptide containing domain for protein-protein interaction
    • C07K2319/72Fusion polypeptide containing domain for protein-protein interaction containing SH2 domain
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2799/00Uses of viruses
    • C12N2799/02Uses of viruses as vector
    • C12N2799/021Uses of viruses as vector for the expression of a heterologous nucleic acid
    • C12N2799/027Uses of viruses as vector for the expression of a heterologous nucleic acid where the vector is derived from a retrovirus

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Biomedical Technology (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Immunology (AREA)
  • Organic Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Zoology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Microbiology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • General Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Cell Biology (AREA)
  • Medicinal Chemistry (AREA)
  • Biophysics (AREA)
  • Toxicology (AREA)
  • Food Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Pathology (AREA)
  • General Physics & Mathematics (AREA)
  • Plant Pathology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Mycology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Peptides Or Proteins (AREA)
DK11769489.3T 2010-04-13 2011-04-13 METHODS FOR GENERATION OF endogenous MARK PROTEIN. DK2558575T3 (en)

Applications Claiming Priority (8)

Application Number Priority Date Filing Date Title
US32371910P 2010-04-13 2010-04-13
US32370210P 2010-04-13 2010-04-13
US32369810P 2010-04-13 2010-04-13
US36701710P 2010-07-23 2010-07-23
US39066810P 2010-10-07 2010-10-07
US40885610P 2010-11-01 2010-11-01
US201161431957P 2011-01-12 2011-01-12
PCT/US2011/032218 WO2011130346A1 (en) 2010-04-13 2011-04-13 Methods for generating endogenously tagged protein

Publications (1)

Publication Number Publication Date
DK2558575T3 true DK2558575T3 (en) 2016-03-21

Family

ID=44799004

Family Applications (1)

Application Number Title Priority Date Filing Date
DK11769489.3T DK2558575T3 (en) 2010-04-13 2011-04-13 METHODS FOR GENERATION OF endogenous MARK PROTEIN.

Country Status (10)

Country Link
US (5) US20130065310A1 (enExample)
EP (2) EP2558575B1 (enExample)
JP (2) JP5841997B2 (enExample)
KR (2) KR20130054955A (enExample)
CN (3) CN102959078B (enExample)
BR (1) BR112012026379A2 (enExample)
CA (2) CA2795643C (enExample)
DK (1) DK2558575T3 (enExample)
ES (1) ES2565216T3 (enExample)
WO (3) WO2011130343A1 (enExample)

Families Citing this family (29)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR20180121665A (ko) 2010-07-23 2018-11-07 시그마-알드리치 컴퍼니., 엘엘씨 표적화 엔도뉴클레아제 및 단일-가닥 핵산을 사용하는 게놈 편집
US9012617B2 (en) * 2011-04-11 2015-04-21 The Trustees Of The University Of Pennsylvania Detection reagents for tyrosine kinase activity and methods of use thereof
KR20250035015A (ko) * 2011-12-05 2025-03-11 팩터 바이오사이언스 인크. 세포를 형질감염시키는 방법들 및 생성물들
GB201122458D0 (en) 2011-12-30 2012-02-08 Univ Wageningen Modified cascade ribonucleoproteins and uses thereof
WO2013142965A1 (en) 2012-03-27 2013-10-03 The University Of Western Ontario Sh2 domain variants
EP3839050A3 (en) * 2012-04-18 2021-09-29 The Board of Trustees of the Leland Stanford Junior University Non-disruptive gene targeting
KR101656236B1 (ko) * 2012-10-23 2016-09-12 주식회사 툴젠 표적 DNA에 특이적인 가이드 RNA 및 Cas 단백질을 암호화하는 핵산 또는 Cas 단백질을 포함하는, 표적 DNA를 절단하기 위한 조성물 및 이의 용도
ES2901396T3 (es) 2013-03-14 2022-03-22 Caribou Biosciences Inc Composiciones y métodos de ácidos nucleicos dirigidos a ácido nucleico
BR112016019940A2 (pt) 2014-03-21 2017-10-24 Univ Leland Stanford Junior edição de genoma sem nucleases
PT3514172T (pt) * 2014-04-01 2020-04-21 Tron Translationale Onkologie An Der Univ Der Johannes Gutenberg Univ Mainz Gemeinnuetzige Gmbh Imunorrecetores específicos de claudina-6 e epítopos de células t
EP3204496A1 (en) 2014-10-10 2017-08-16 Editas Medicine, Inc. Compositions and methods for promoting homology directed repair
WO2016073990A2 (en) 2014-11-07 2016-05-12 Editas Medicine, Inc. Methods for improving crispr/cas-mediated genome-editing
WO2016149109A1 (en) 2015-03-13 2016-09-22 University Of Maryland, Baltimore Universal antibody-mediated biosensor
AU2016326711B2 (en) 2015-09-24 2022-11-03 Editas Medicine, Inc. Use of exonucleases to improve CRISPR/Cas-mediated genome editing
EP4249074A3 (en) * 2015-11-04 2024-01-10 Fate Therapeutics, Inc. Genomic engineering of pluripotent cells
KR20180086264A (ko) * 2015-12-23 2018-07-30 테크놀로지안 투트키무스케스쿠스 브이티티 오와이 세포로부터 인디케이터 신호를 얻는 방법
EP3433363A1 (en) 2016-03-25 2019-01-30 Editas Medicine, Inc. Genome editing systems comprising repair-modulating enzyme molecules and methods of their use
WO2017180694A1 (en) 2016-04-13 2017-10-19 Editas Medicine, Inc. Cas9 fusion molecules gene editing systems, and methods of use thereof
CN106800602B (zh) * 2017-01-22 2020-05-01 中国科学院生物物理研究所 一种可视化标记基因组位点的方法
WO2018148603A1 (en) * 2017-02-09 2018-08-16 Allen Institute Genetically-tagged stem cell lines and methods of use
WO2019014564A1 (en) 2017-07-14 2019-01-17 Editas Medicine, Inc. SYSTEMS AND METHODS OF TARGETED INTEGRATION AND GENOME EDITING AND DETECTION THEREOF WITH INTEGRATED PRIMING SITES
WO2019118879A1 (en) * 2017-12-14 2019-06-20 Donald Danforth Plant Science Center Homologous recombination via transcriptional activation
SG11202009499VA (en) * 2018-05-04 2020-11-27 Sigma Aldrich Co Llc Producing recombinant proteins with reduced levels of host cell proteins
JP7233545B2 (ja) * 2018-12-30 2023-03-06 エフ. ホフマン-ラ ロシュ アーゲー 標的タンパク質への検出可能なタグのCRISPR/Cas制御組み込みに基づく細胞の選択方法
US20220401537A1 (en) * 2019-09-16 2022-12-22 Fred Hutchinson Cancer Research Center Chimeric receptor proteins and uses thereof
CN113684228B (zh) * 2021-10-26 2022-03-11 天九再生医学(天津)科技有限公司 利用内参快速准确表征蛋白质相对丰度的方法
CN114703174B (zh) * 2022-04-12 2023-10-24 中国科学院海洋研究所 快速获得基因型和表型突变的CRISPR/Cas9基因敲除方法及应用
CN115948401A (zh) * 2022-12-19 2023-04-11 中国科学技术大学 一种多靶点rna靶向敲低系统及应用
CN120177781B (zh) * 2025-05-22 2025-08-12 南京师范大学 生物传感器及其应用和高通量筛选花姜酮生产菌的方法

Family Cites Families (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7192772B1 (en) * 1988-08-31 2007-03-20 The University Of Florida Research Foundations, Inc. Recombinant cells that highly express chromosomally-integrated heterologous gene
US7090976B2 (en) * 1999-11-10 2006-08-15 Rigel Pharmaceuticals, Inc. Methods and compositions comprising Renilla GFP
US6495664B1 (en) * 1998-07-24 2002-12-17 Aurora Biosciences Corporation Fluorescent protein sensors of post-translational modifications
US6534261B1 (en) * 1999-01-12 2003-03-18 Sangamo Biosciences, Inc. Regulation of endogenous gene expression in cells using zinc finger proteins
US6710170B2 (en) * 1999-09-10 2004-03-23 Corixa Corporation Compositions and methods for the therapy and diagnosis of ovarian cancer
US7125660B2 (en) * 2000-09-13 2006-10-24 Archemix Corp. Nucleic acid sensor molecules and methods of using same
US7332589B2 (en) * 2001-09-26 2008-02-19 University Of North Carolina At Chapel Hill Variants of alpha-fetoprotein coding and expression sequences
EP2927318B1 (en) * 2003-08-08 2020-05-20 Sangamo Therapeutics, Inc. Methods and compositions for targeted cleavage and recombination
US7402436B2 (en) * 2004-05-03 2008-07-22 City Of Hope Lentiviral vectors for site-specific gene insertion
EP1774330A4 (en) * 2004-08-02 2008-10-15 Cellumen Inc METHODS FOR DETECTION OF MOLECULAR INTERACTIONS IN CELLS
EP2292274A1 (en) * 2004-09-16 2011-03-09 Sangamo BioSciences, Inc. Compositions and methods for protein production
US20060171929A1 (en) * 2005-01-31 2006-08-03 The University Of Washington Regulation of dendritic cell functions by the DCAL-2 receptor
WO2006094073A2 (en) * 2005-03-02 2006-09-08 Acadia Pharmaceuticals Inc. Functional bioluminescence energy resonance transfer (bret) assay to screen, identify and characterize receptor tyrosine kinase ligands
EP1869206A4 (en) * 2005-03-02 2011-08-10 Einstein Coll Med ENZYME SENSORS WITH ENVIRONMENTAL SENSITIVE OR FLUORESCENT LABELS AND APPLICATIONS THEREOF
US8114964B2 (en) * 2005-05-19 2012-02-14 Centocor, Inc. Anti-MCP-1 antibodies, compositions, methods and uses
WO2007013979A2 (en) * 2005-07-20 2007-02-01 Invitrogen Corporation Methods for increasing efficiency of homologous recombination
US20080305519A1 (en) * 2006-02-23 2008-12-11 Qing Lin Biochemical method for specific protein labeling
WO2007139895A2 (en) * 2006-05-24 2007-12-06 Cellumen, Inc. Method for modeling a disease
CA2703045C (en) * 2007-10-25 2017-02-14 Sangamo Biosciences, Inc. Methods and compositions for targeted integration
JP2011518555A (ja) * 2008-04-14 2011-06-30 サンガモ バイオサイエンシーズ, インコーポレイテッド 標的組込みのための線形ドナーコンストラクト
EP2313515B1 (en) * 2008-08-22 2015-03-04 Sangamo BioSciences, Inc. Methods and compositions for targeted single-stranded cleavage and targeted integration

Also Published As

Publication number Publication date
US20130059388A1 (en) 2013-03-07
EP2558574A1 (en) 2013-02-20
WO2011130343A1 (en) 2011-10-20
US20180134759A1 (en) 2018-05-17
EP2558574A4 (en) 2013-10-30
JP2013523181A (ja) 2013-06-17
ES2565216T3 (es) 2016-04-01
EP2558575A4 (en) 2013-10-30
EP2558575B1 (en) 2015-12-16
JP5841996B2 (ja) 2016-01-13
EP2558575A1 (en) 2013-02-20
CN102971421A (zh) 2013-03-13
CN102959078A (zh) 2013-03-06
CN107805278A (zh) 2018-03-16
WO2011130346A1 (en) 2011-10-20
CA2795636C (en) 2018-07-31
KR20130055588A (ko) 2013-05-28
WO2011130345A1 (en) 2011-10-20
BR112012026379A2 (pt) 2015-09-22
US20130065310A1 (en) 2013-03-14
JP5841997B2 (ja) 2016-01-13
CN102959078B (zh) 2016-01-20
CA2795636A1 (en) 2011-10-20
CA2795643C (en) 2018-07-17
US20180105564A1 (en) 2018-04-19
KR20130054955A (ko) 2013-05-27
CA2795643A1 (en) 2011-10-20
JP2013523180A (ja) 2013-06-17
US20130059362A1 (en) 2013-03-07
EP2558574B1 (en) 2015-03-18

Similar Documents

Publication Publication Date Title
DK2558575T3 (en) METHODS FOR GENERATION OF endogenous MARK PROTEIN.
CN102939377B (zh) 使用锌指核酸酶对Rosa位点进行基因组编辑
US20120030778A1 (en) Genomic editing of genes involved with parkinsons disease
US20110023141A1 (en) Genomic editing of genes involved with parkinson's disease
US20160145645A1 (en) Targeted integration
US20110023153A1 (en) Genomic editing of genes involved in alzheimer's disease
US20120159654A1 (en) Genome editing of genes involved in adme and toxicology in animals
US20120023599A1 (en) Genome editing of cytochrome p450 in animals
CN103168101A (zh) 使用靶向核酸内切酶和单链核酸的基因组编辑
US8975042B2 (en) Fluorescent and colored proteins and methods for using them
US9771402B2 (en) Fluorescent and colored proteins and methods for using them
WO2008094316A2 (en) Novel branchiostoma derived fluorescent proteins
Heuvel et al. Supporting Information for A disease-associated XPA allele interferes with TFIIH binding and primarily affects transcription-coupled nucleotide excision repair
WO2020209332A1 (ja) 核酸結合性タンパク質