CN116676287A - 肠道微生物来源的岩藻糖基转移酶及其应用 - Google Patents
肠道微生物来源的岩藻糖基转移酶及其应用 Download PDFInfo
- Publication number
- CN116676287A CN116676287A CN202310567614.7A CN202310567614A CN116676287A CN 116676287 A CN116676287 A CN 116676287A CN 202310567614 A CN202310567614 A CN 202310567614A CN 116676287 A CN116676287 A CN 116676287A
- Authority
- CN
- China
- Prior art keywords
- fucosyltransferase
- gene
- recombinant
- fermentation
- plasmid
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 108010019236 Fucosyltransferases Proteins 0.000 title claims abstract description 58
- 102000006471 Fucosyltransferases Human genes 0.000 title claims abstract description 52
- 244000005700 microbiome Species 0.000 title abstract description 18
- 230000000968 intestinal effect Effects 0.000 title abstract description 17
- 238000000855 fermentation Methods 0.000 claims abstract description 54
- 230000004151 fermentation Effects 0.000 claims abstract description 54
- 108090000623 proteins and genes Proteins 0.000 claims abstract description 46
- 241000894006 Bacteria Species 0.000 claims abstract description 32
- 241000194108 Bacillus licheniformis Species 0.000 claims abstract description 18
- 238000004519 manufacturing process Methods 0.000 claims abstract description 13
- 229940062827 2'-fucosyllactose Drugs 0.000 claims abstract description 6
- HWHQUWQCBPAQQH-UHFFFAOYSA-N 2-O-alpha-L-Fucosyl-lactose Natural products OC1C(O)C(O)C(C)OC1OC1C(O)C(O)C(CO)OC1OC(C(O)CO)C(O)C(O)C=O HWHQUWQCBPAQQH-UHFFFAOYSA-N 0.000 claims abstract description 6
- HWHQUWQCBPAQQH-BWRPKUOHSA-N 2-fucosyllactose Chemical compound O[C@H]1[C@H](O)[C@H](O)[C@H](C)O[C@H]1O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@H]([C@H](O)CO)[C@H](O)[C@@H](O)C=O HWHQUWQCBPAQQH-BWRPKUOHSA-N 0.000 claims abstract description 6
- SNFSYLYCDAVZGP-UHFFFAOYSA-N UNPD26986 Natural products OC1C(O)C(O)C(C)OC1OC1C(OC2C(OC(O)C(O)C2O)CO)OC(CO)C(O)C1O SNFSYLYCDAVZGP-UHFFFAOYSA-N 0.000 claims abstract description 6
- 239000013612 plasmid Substances 0.000 claims description 45
- 238000000034 method Methods 0.000 claims description 26
- 102000004169 proteins and genes Human genes 0.000 claims description 21
- 239000002773 nucleotide Substances 0.000 claims description 19
- 125000003729 nucleotide group Chemical group 0.000 claims description 19
- 239000012634 fragment Substances 0.000 claims description 14
- 230000014509 gene expression Effects 0.000 claims description 13
- 101150088678 manB gene Proteins 0.000 claims description 6
- 101100075927 Aspergillus aculeatus mndA gene Proteins 0.000 claims description 5
- 101100280818 Escherichia coli (strain K12) fcl gene Proteins 0.000 claims description 5
- 101100022282 Escherichia coli O157:H7 manC2 gene Proteins 0.000 claims description 5
- 229930006000 Sucrose Natural products 0.000 claims description 5
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 claims description 5
- 101150032120 manC gene Proteins 0.000 claims description 5
- 239000005720 sucrose Substances 0.000 claims description 5
- 240000004808 Saccharomyces cerevisiae Species 0.000 claims description 4
- 108090000992 Transferases Proteins 0.000 claims description 4
- 108030006298 GDP-L-fucose synthases Proteins 0.000 claims description 3
- 108010062427 GDP-mannose 4,6-dehydratase Proteins 0.000 claims description 3
- GUBGYTABKSRVRQ-QKKXKWKRSA-N Lactose Natural products OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)C(O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O GUBGYTABKSRVRQ-QKKXKWKRSA-N 0.000 claims description 3
- 239000008101 lactose Substances 0.000 claims description 3
- GBXZONVFWYCRPT-KVTDHHQDSA-N [(2s,3s,4r,5r)-3,4,5,6-tetrahydroxy-1-oxohexan-2-yl] dihydrogen phosphate Chemical compound OC[C@@H](O)[C@@H](O)[C@H](O)[C@@H](C=O)OP(O)(O)=O GBXZONVFWYCRPT-KVTDHHQDSA-N 0.000 claims description 2
- 125000003275 alpha amino acid group Chemical group 0.000 claims description 2
- 235000012343 cottonseed oil Nutrition 0.000 claims description 2
- 101150106565 gmd gene Proteins 0.000 claims 2
- 235000013350 formula milk Nutrition 0.000 claims 1
- 230000003197 catalytic effect Effects 0.000 abstract description 11
- 235000020256 human milk Nutrition 0.000 abstract description 7
- 210000004251 human milk Anatomy 0.000 abstract description 7
- 229920001542 oligosaccharide Polymers 0.000 abstract description 7
- 150000002482 oligosaccharides Chemical class 0.000 abstract description 7
- 238000010353 genetic engineering Methods 0.000 abstract description 2
- 238000005215 recombination Methods 0.000 abstract description 2
- 102000004190 Enzymes Human genes 0.000 description 33
- 108090000790 Enzymes Proteins 0.000 description 33
- 229940088598 enzyme Drugs 0.000 description 33
- 239000000243 solution Substances 0.000 description 22
- 230000000694 effects Effects 0.000 description 17
- 238000012258 culturing Methods 0.000 description 14
- 210000004027 cell Anatomy 0.000 description 13
- 239000006228 supernatant Substances 0.000 description 12
- 238000006243 chemical reaction Methods 0.000 description 11
- 239000002609 medium Substances 0.000 description 11
- 239000011324 bead Substances 0.000 description 10
- 238000002156 mixing Methods 0.000 description 10
- 239000000203 mixture Substances 0.000 description 9
- 238000010276 construction Methods 0.000 description 8
- 230000006801 homologous recombination Effects 0.000 description 8
- 238000002744 homologous recombination Methods 0.000 description 8
- 238000001514 detection method Methods 0.000 description 7
- 238000004128 high performance liquid chromatography Methods 0.000 description 7
- 241000588724 Escherichia coli Species 0.000 description 6
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 6
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 6
- 239000001963 growth medium Substances 0.000 description 6
- 239000000047 product Substances 0.000 description 5
- 239000000523 sample Substances 0.000 description 5
- 238000012216 screening Methods 0.000 description 5
- 101100272609 Arabidopsis thaliana BLH1 gene Proteins 0.000 description 4
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 4
- 101150046686 LAP3 gene Proteins 0.000 description 4
- 238000002835 absorbance Methods 0.000 description 4
- 230000001580 bacterial effect Effects 0.000 description 4
- 239000007788 liquid Substances 0.000 description 4
- 241000311115 Bacillus paralicheniformis ATCC 9945a Species 0.000 description 3
- FBPFZTCFMRRESA-FSIIMWSLSA-N D-Glucitol Natural products OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)CO FBPFZTCFMRRESA-FSIIMWSLSA-N 0.000 description 3
- FBPFZTCFMRRESA-KVTDHHQDSA-N D-Mannitol Chemical compound OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO FBPFZTCFMRRESA-KVTDHHQDSA-N 0.000 description 3
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 3
- 241000590002 Helicobacter pylori Species 0.000 description 3
- 229930195725 Mannitol Natural products 0.000 description 3
- 108700040099 Xylose isomerases Proteins 0.000 description 3
- -1 arsinate-HCl Chemical compound 0.000 description 3
- 230000009286 beneficial effect Effects 0.000 description 3
- 230000015572 biosynthetic process Effects 0.000 description 3
- 238000005119 centrifugation Methods 0.000 description 3
- 238000001976 enzyme digestion Methods 0.000 description 3
- 229940037467 helicobacter pylori Drugs 0.000 description 3
- RAXXELZNTBOGNW-UHFFFAOYSA-N imidazole Natural products C1=CNC=N1 RAXXELZNTBOGNW-UHFFFAOYSA-N 0.000 description 3
- 238000007885 magnetic separation Methods 0.000 description 3
- 239000000594 mannitol Substances 0.000 description 3
- 235000010355 mannitol Nutrition 0.000 description 3
- 238000000746 purification Methods 0.000 description 3
- 239000011780 sodium chloride Substances 0.000 description 3
- 239000000600 sorbitol Substances 0.000 description 3
- 239000000758 substrate Substances 0.000 description 3
- 238000005406 washing Methods 0.000 description 3
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 2
- SRBFZHDQGSBBOR-IOVATXLUSA-N D-xylopyranose Chemical compound O[C@@H]1COC(O)[C@H](O)[C@H]1O SRBFZHDQGSBBOR-IOVATXLUSA-N 0.000 description 2
- LQEBEXMHBLQMDB-UHFFFAOYSA-N GDP-L-fucose Natural products OC1C(O)C(O)C(C)OC1OP(O)(=O)OP(O)(=O)OCC1C(O)C(O)C(N2C3=C(C(N=C(N)N3)=O)N=C2)O1 LQEBEXMHBLQMDB-UHFFFAOYSA-N 0.000 description 2
- LQEBEXMHBLQMDB-JGQUBWHWSA-N GDP-beta-L-fucose Chemical compound O[C@H]1[C@H](O)[C@H](O)[C@H](C)O[C@@H]1OP(O)(=O)OP(O)(=O)OC[C@@H]1[C@@H](O)[C@@H](O)[C@H](N2C3=C(C(NC(N)=N3)=O)N=C2)O1 LQEBEXMHBLQMDB-JGQUBWHWSA-N 0.000 description 2
- 108700007698 Genetic Terminator Regions Proteins 0.000 description 2
- 239000001888 Peptone Substances 0.000 description 2
- 108010080698 Peptones Proteins 0.000 description 2
- 229920004890 Triton X-100 Polymers 0.000 description 2
- 239000013504 Triton X-100 Substances 0.000 description 2
- 230000003213 activating effect Effects 0.000 description 2
- 238000005273 aeration Methods 0.000 description 2
- 238000000246 agarose gel electrophoresis Methods 0.000 description 2
- 235000011114 ammonium hydroxide Nutrition 0.000 description 2
- 239000000872 buffer Substances 0.000 description 2
- 238000012512 characterization method Methods 0.000 description 2
- 230000000052 comparative effect Effects 0.000 description 2
- 238000011109 contamination Methods 0.000 description 2
- NKLPQNGYXWVELD-UHFFFAOYSA-M coomassie brilliant blue Chemical compound [Na+].C1=CC(OCC)=CC=C1NC1=CC=C(C(=C2C=CC(C=C2)=[N+](CC)CC=2C=C(C=CC=2)S([O-])(=O)=O)C=2C=CC(=CC=2)N(CC)CC=2C=C(C=CC=2)S([O-])(=O)=O)C=C1 NKLPQNGYXWVELD-UHFFFAOYSA-M 0.000 description 2
- 230000008878 coupling Effects 0.000 description 2
- 238000010168 coupling process Methods 0.000 description 2
- 238000005859 coupling reaction Methods 0.000 description 2
- 238000011161 development Methods 0.000 description 2
- 230000018109 developmental process Effects 0.000 description 2
- 238000000502 dialysis Methods 0.000 description 2
- 238000001962 electrophoresis Methods 0.000 description 2
- 239000003550 marker Substances 0.000 description 2
- 235000019319 peptone Nutrition 0.000 description 2
- 230000001737 promoting effect Effects 0.000 description 2
- 238000001742 protein purification Methods 0.000 description 2
- 230000001172 regenerating effect Effects 0.000 description 2
- 238000004088 simulation Methods 0.000 description 2
- GCLGEJMYGQKIIW-UHFFFAOYSA-H sodium hexametaphosphate Chemical compound [Na]OP1(=O)OP(=O)(O[Na])OP(=O)(O[Na])OP(=O)(O[Na])OP(=O)(O[Na])OP(=O)(O[Na])O1 GCLGEJMYGQKIIW-UHFFFAOYSA-H 0.000 description 2
- 235000019982 sodium hexametaphosphate Nutrition 0.000 description 2
- 238000003756 stirring Methods 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- GUBGYTABKSRVRQ-XLOQQCSPSA-N Alpha-Lactose Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-XLOQQCSPSA-N 0.000 description 1
- 235000014469 Bacillus subtilis Nutrition 0.000 description 1
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 1
- SHZGCJCMOBCMKK-UHFFFAOYSA-N D-mannomethylose Natural products CC1OC(O)C(O)C(O)C1O SHZGCJCMOBCMKK-UHFFFAOYSA-N 0.000 description 1
- WQZGKKKJIJFFOK-QTVWNMPRSA-N D-mannopyranose Chemical compound OC[C@H]1OC(O)[C@@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-QTVWNMPRSA-N 0.000 description 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 1
- 102000051366 Glycosyltransferases Human genes 0.000 description 1
- 108700023372 Glycosyltransferases Proteins 0.000 description 1
- SHZGCJCMOBCMKK-PQMKYFCFSA-N L-Fucose Natural products C[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O SHZGCJCMOBCMKK-PQMKYFCFSA-N 0.000 description 1
- SHZGCJCMOBCMKK-DHVFOXMCSA-N L-fucopyranose Chemical compound C[C@@H]1OC(O)[C@@H](O)[C@H](O)[C@@H]1O SHZGCJCMOBCMKK-DHVFOXMCSA-N 0.000 description 1
- PNNNRSAQSRJVSB-UHFFFAOYSA-N L-rhamnose Natural products CC(O)C(O)C(O)C(O)C=O PNNNRSAQSRJVSB-UHFFFAOYSA-N 0.000 description 1
- 102000016943 Muramidase Human genes 0.000 description 1
- 108010014251 Muramidase Proteins 0.000 description 1
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 description 1
- 102000004357 Transferases Human genes 0.000 description 1
- 230000003321 amplification Effects 0.000 description 1
- 238000000137 annealing Methods 0.000 description 1
- PYMYPHUHKUWMLA-UHFFFAOYSA-N arabinose Natural products OCC(O)C(O)C(O)C=O PYMYPHUHKUWMLA-UHFFFAOYSA-N 0.000 description 1
- SRBFZHDQGSBBOR-UHFFFAOYSA-N beta-D-Pyranose-Lyxose Natural products OC1COC(O)C(O)C1O SRBFZHDQGSBBOR-UHFFFAOYSA-N 0.000 description 1
- 239000012148 binding buffer Substances 0.000 description 1
- 239000001045 blue dye Substances 0.000 description 1
- VZZBCNXVZFAIQX-UHFFFAOYSA-N bms-986260 Chemical compound ClC=1C=C(C=CC=1F)C=1N=CN(C=1C=1C=CC=2N(N=1)C(=CN=2)C#N)CCO VZZBCNXVZFAIQX-UHFFFAOYSA-N 0.000 description 1
- 210000004556 brain Anatomy 0.000 description 1
- 239000007853 buffer solution Substances 0.000 description 1
- 238000004364 calculation method Methods 0.000 description 1
- 238000006555 catalytic reaction Methods 0.000 description 1
- 238000004587 chromatography analysis Methods 0.000 description 1
- 238000003776 cleavage reaction Methods 0.000 description 1
- 238000010367 cloning Methods 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- 239000000385 dialysis solution Substances 0.000 description 1
- 238000004520 electroporation Methods 0.000 description 1
- 239000012149 elution buffer Substances 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 230000002255 enzymatic effect Effects 0.000 description 1
- 238000001952 enzyme assay Methods 0.000 description 1
- 235000013305 food Nutrition 0.000 description 1
- 108700014210 glycosyltransferase activity proteins Proteins 0.000 description 1
- 230000007062 hydrolysis Effects 0.000 description 1
- 238000006460 hydrolysis reaction Methods 0.000 description 1
- 210000000987 immune system Anatomy 0.000 description 1
- 239000012535 impurity Substances 0.000 description 1
- 238000000338 in vitro Methods 0.000 description 1
- 230000001939 inductive effect Effects 0.000 description 1
- 239000007924 injection Substances 0.000 description 1
- 238000002347 injection Methods 0.000 description 1
- 230000003993 interaction Effects 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 229960000274 lysozyme Drugs 0.000 description 1
- 239000004325 lysozyme Substances 0.000 description 1
- 235000010335 lysozyme Nutrition 0.000 description 1
- 230000001404 mediated effect Effects 0.000 description 1
- 239000002207 metabolite Substances 0.000 description 1
- 230000000813 microbial effect Effects 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 238000003199 nucleic acid amplification method Methods 0.000 description 1
- 230000037361 pathway Effects 0.000 description 1
- 238000012257 pre-denaturation Methods 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 239000003761 preservation solution Substances 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 238000002731 protein assay Methods 0.000 description 1
- 238000004445 quantitative analysis Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 239000012557 regeneration buffer Substances 0.000 description 1
- 150000003839 salts Chemical class 0.000 description 1
- 239000012488 sample solution Substances 0.000 description 1
- 238000005070 sampling Methods 0.000 description 1
- 230000007017 scission Effects 0.000 description 1
- 230000003248 secreting effect Effects 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 239000012064 sodium phosphate buffer Substances 0.000 description 1
- 210000001082 somatic cell Anatomy 0.000 description 1
- 238000001179 sorption measurement Methods 0.000 description 1
- 238000003786 synthesis reaction Methods 0.000 description 1
- 230000002194 synthesizing effect Effects 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 238000011426 transformation method Methods 0.000 description 1
- 230000001131 transforming effect Effects 0.000 description 1
- 238000005918 transglycosylation reaction Methods 0.000 description 1
- 238000000108 ultra-filtration Methods 0.000 description 1
- 238000012795 verification Methods 0.000 description 1
- 239000011534 wash buffer Substances 0.000 description 1
Classifications
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23C—DAIRY PRODUCTS, e.g. MILK, BUTTER OR CHEESE; MILK OR CHEESE SUBSTITUTES; MAKING THEREOF
- A23C9/00—Milk preparations; Milk powder or milk powder preparations
- A23C9/20—Dietetic milk products not covered by groups A23C9/12 - A23C9/18
- A23C9/203—Dietetic milk products not covered by groups A23C9/12 - A23C9/18 containing bifidus-active substances, e.g. lactulose; containing oligosaccharides
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/52—Genes encoding for enzymes or proenzymes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
- C12N15/75—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora for Bacillus
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/0004—Oxidoreductases (1.)
- C12N9/0006—Oxidoreductases (1.) acting on CH-OH groups as donors (1.1)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/1048—Glycosyltransferases (2.4)
- C12N9/1051—Hexosyltransferases (2.4.1)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/88—Lyases (4.)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/90—Isomerases (5.)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P19/00—Preparation of compounds containing saccharide radicals
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y101/00—Oxidoreductases acting on the CH-OH group of donors (1.1)
- C12Y101/01—Oxidoreductases acting on the CH-OH group of donors (1.1) with NAD+ or NADP+ as acceptor (1.1.1)
- C12Y101/01271—GDP-L-fucose synthase (1.1.1.271)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y204/00—Glycosyltransferases (2.4)
- C12Y204/01—Hexosyltransferases (2.4.1)
- C12Y204/01069—Galactoside 2-alpha-L-fucosyltransferase (2.4.1.69)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y207/00—Transferases transferring phosphorus-containing groups (2.7)
- C12Y207/07—Nucleotidyltransferases (2.7.7)
- C12Y207/07013—Mannose-1-phosphate guanylyltransferase (2.7.7.13)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y402/00—Carbon-oxygen lyases (4.2)
- C12Y402/01—Hydro-lyases (4.2.1)
- C12Y402/01047—GDP-mannose 4,6-dehydratase (4.2.1.47), i.e. GMD
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y504/00—Intramolecular transferases (5.4)
- C12Y504/02—Phosphotransferases (phosphomutases) (5.4.2)
- C12Y504/02008—Phosphomannomutase (5.4.2.8)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
- C12R2001/00—Microorganisms ; Processes using microorganisms
- C12R2001/01—Bacteria or Actinomycetales ; using bacteria or Actinomycetales
- C12R2001/07—Bacillus
- C12R2001/10—Bacillus licheniformis
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Landscapes
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- Biomedical Technology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Medicinal Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Food Science & Technology (AREA)
- Nutrition Science (AREA)
- Polymers & Plastics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- Enzymes And Modification Thereof (AREA)
Abstract
本发明公开了肠道微生物来源的岩藻糖基转移酶及其应用,属于合成生物学和基因工程技术领域。本发明提供了从肠道微生物中筛选的具有α‑1,2特异性的岩藻糖基转移酶及其编码基因,利用基因重组技术,将这些岩藻糖基转移酶的编码基因在地衣芽孢杆菌中异源表达,所获得的重组菌株可用于2’‑岩藻糖基乳糖的发酵生产。本发明所发现的岩藻糖基转移酶催化活力高,且最适催化温度与细菌的高温发酵所匹配,在母乳寡糖的发酵生产等应用中具有很大的潜力。
Description
技术领域
本发明涉及肠道微生物来源的岩藻糖基转移酶及其应用,属于合成生物学和基因工程技术领域。
背景技术
母乳寡糖是只存在于母乳中的一种重要低聚糖,在促进婴儿肠道菌群生长、完善免疫系统功能,以及促进大脑发育等方面发挥着不可替代的作用。其中2’-岩藻糖基乳糖(2’-FL)占母乳寡糖总量的30%,是占比最高的一种母乳寡糖。它可由L-岩藻糖和乳糖通过岩藻糖基转移酶催化合成。
近年来,研究者已开始广泛地使用微生物发酵法生产2’-FL,主要使用的宿主菌包括大肠杆菌、枯草芽孢杆菌和地衣芽孢杆菌等。这些微生物的野生型基因组中已含有2’-FL合成途径的多种酶,如甘露糖变位酶、甘露糖-1-磷酸-鸟苷酸转移酶等,然而均没有岩藻糖基转移酶。目前在2’-FL重组菌株构建中应用最为广泛的岩藻糖基转移酶基因是幽门螺杆菌来源的futC和大肠杆菌O126来源的wbgL。虽然已有研究利用以上两种微生物来源的岩藻糖基转移酶构建获得了可以生产2’-FL的重组菌,但是futC和wbgL编码的岩藻糖基转移酶在40℃以上的温度条件下催化效率极低。由于工业微生物的高温发酵对于降低染菌风险,提高发酵效率和降低发酵成本均十分有利,因此,挖掘与筛选催化效率高,且最适催化温度与细菌高温发酵条件相匹配的岩藻糖基转移酶,在2’-FL的发酵生产等应用中具有很大的潜力。
肠道微生物是与母乳寡糖具有重要相互作用的一类微生物,它们所产生酶所介导的水解或转糖基反应可以改变母乳寡糖的结构。因此,肠道微生物有可能成为新型糖基转移酶的来源。然而,肠道微生物大多难以在体外的标准条件下进行纯培养及分离,阻碍了肠道微生物来源的催化效率高且耐高温的岩藻糖基转移酶的筛选。
发明内容
针对上述缺乏一种催化效率高、耐高温的岩藻糖基转移酶,且难以筛选的技术问题,本发明的目的在于利用宏基因组学技术,提供肠道微生物来源的催化活力高、且最适催化温度与细菌高温发酵所匹配的岩藻糖基转移酶及其编码基因。经过对携带了该基因的重组微生物发酵及代谢产物检测发现所筛选出的新酶可以在42℃的条件下高效合成2’-FL,从而在母乳寡糖的发酵生产等应用中具有很大的潜力。
本发明提供一种肠道微生物来源的具有ɑ-1,2特异性的岩藻糖基转移酶,所述岩藻糖基转移酶的氨基酸序列由SEQ ID NO.1所示,命名为HM26。
本发明提供一种肠道微生物来源的具有ɑ-1,2特异性的岩藻糖基转移酶的编码基因,所述岩藻糖基转移酶的编码基因是从肠道宏基因组中筛选获得;其核苷酸序列由SEQID NO.2所示,分别编码HM26;
本发明提出的表达岩藻糖基转移酶的重组菌,以细菌或酵母为宿主,表达上述岩藻糖基转移酶。
在本发明的一种实施方式中,所述宿主为地衣芽孢杆菌。
本发明提出的表达岩藻糖基转移酶HM26的重组菌BLN2的构建方法,包含以下步骤:
通过同源重组将核苷酸序列如SEQ ID NO.3所示PLan启动子和核苷酸序列如SEQID NO.4所示木糖异构酶基因的终止子ter分别与SEQ ID NO.5所示磷酸甘露糖变位酶基因manB、SEQ ID NO.6所示甘露糖-1-磷酸-鸟苷酸转移酶基因manC、SEQ ID NO.7所示GDP-甘露糖-4,6-脱水酶基因gmd、SEQ ID NO.8所示GDP-L-岩藻糖合成酶基因wcaG以及岩藻糖基转移酶HM26基因融合,获得基因表达片段H1、H2、H3、H4与N5;
分别使用引物对扩增基因表达片段H1、H2、H3、H4与N5,从而在基因片段两端引入酶切位点。依次利用同源重组的方法将基因表达片段H1、H2、H3连接入pHY300PLK质粒,得到重组质粒pHY-H123。再依次利用同源重组的方法将基因表达片段H4和N5连接入pHT43质粒,得到重组质粒pHT-N45。利用1%琼脂糖凝胶电泳进一步验证质粒的构建情况;
将成功构建的重组质粒pHYH123转化地衣芽孢杆菌ATCC 9945A,获得地衣芽孢杆菌工程菌BLH1,再将重组质粒pHT-N45以上述相同的方法转化地衣芽孢杆菌工程菌BLH1,获得重组地衣芽孢杆菌菌BLN2;
本发明提出的表达岩藻糖基转移酶的重组菌生产2’-岩藻糖基乳糖的方法,将上述重组菌在LB平板上划线活化,37℃培养16h后挑取单菌落接种于15mL LB培养基中37℃、250r·min-1培养16h-18h作为种子液,取1mL种子液转接于30mL的摇瓶发酵培养基进行摇瓶发酵,控制初始OD为0.5-1,于37℃或42℃、250r·min-1培养;
或将上述重组菌于发酵温度42℃、初始pH7.5的条件下在发酵罐中进行补料分批发酵。当发酵过程中pH下降到7.0时通过补加50%氨水使得发酵过程中pH维持在7.0左右,发酵过程中通气量控制在0.5vvm,将搅拌与DO偶联控制DO维持在30%左右,转速上限设置为800rpm。发酵8h后连续补加蔗糖,维持其不被耗尽。
在本发明的一种实施方式中,提出了肠道宏基因组来源的岩藻糖基转移酶与表达岩藻糖基转移酶的重组菌在生产2'-FL发酵生产中的应用。
有益效果
本发明的有益效果在于:
(1)本发明提供了一种肠道微生物来源的新型岩藻糖基转移酶HM26,其催化效率高,且在高温发酵(42℃)下仍具有较好的催化功能,在工业应用中有助于降低染菌风险,提高发酵效率和降低发酵成本。
(2)本发明构建了表达岩藻糖基转移酶HM26的地衣芽孢杆菌重组菌BLN2,在42℃培养条件下,重组菌BLN2摇瓶发酵36h后可以得到2.85g/L的2’-FL;重组菌BLN2在30L发酵罐补料分批发酵46h后2’-FL的产量达到51g/L,最大OD600为73.5。
附图说明
图1:重组质粒pHY-H123质粒图谱。
图2:重组质粒pHT-N45质粒图谱。
图3:重组质粒验证的电泳图谱;M,标准分子量Marker;泳道1,pHY-H123使用SmaI和EcoRI双酶切;泳道2,pHT-N45使用EcoRV单酶切;泳道3-10,转化子菌落PCR验证样品。
图4:重组岩藻糖基转移酶HM26纯酶的蛋白电泳检测;M,标准蛋白分子量Marker;泳道1,重组岩藻糖基转移酶HM26纯酶。
图5:不同温度条件下重组岩藻糖基转移酶HM26纯酶的比酶活。
图6:发酵上清液中2'-FL的HPLC定量分析。
具体实施方式
下述实施例中涉及的菌株和引物。
表1本发明中涉及的菌株
表2引入酶切位点所用引物序列
表3引物序列
本发明所用基因序列均为人工合成。
实施例1岩藻糖基转移酶基因序列的确定
利用dbCAN2对比工具,将无锡市采集的婴儿肠道宏基因组与CAZyme数据库进行比对,筛选比对到family 1glycosyltransferases(GT1)的基因序列,再经过蛋白质一级结构模拟预测(ExPASy-ProtParam)、二级结构模拟预测(SOPMA)、三维结构模板预测(SWISS-MODEL)筛选出结构稳定性强的岩藻糖基转移酶基因,人工合成以上基因片段,命名为HM26,并进行异源表达和活性测试。
具体方式为通过同源重组将PLan启动子(核苷酸序列SEQ ID NO.3所示)和木糖异构酶基因的终止子ter(核苷酸序列SEQ ID NO.4所示)分别与编码岩藻糖基转移酶HM26的核苷酸序列(如SEQ ID NO.2所示)克隆至载体pHY300-PLK上,获得重组质粒pHY-HM26。
构建重组质粒pHY-HM26的具体方法为:首先以地衣芽孢杆菌基因组为模板,使用引物对PF11-F/R扩增PLan启动子序列,使用引物对PF13-F/R扩增终止子ter序列;以化学合成的SEQ ID NO.5所示核苷酸序列为模板,使用引物对PF22-F/R扩增HM26编码基因序列。然后通过同源重组,将上述三个片段一次性连接至使用HindIII和BamHI双酶切线性化的pHY300-PLK上,转化大肠杆菌,挑取阳性转化子,提取质粒,得到重组质粒pHY-HM26。
将重组质粒pHY-HM26转化入地衣芽孢杆菌ATCC 9945A,获得重组菌BHM26。分别在LB平板上培养重组菌,于37℃培养16h后挑取单菌落接种于15mL LB培养基中37℃、250r·min-1培养16h-18h作为种子液,取1mL种子液转接于30mL的摇瓶发酵培养基,控制初始OD为0.5-1,于37℃或42℃、250r·min-1培养。发酵48h收集细胞,使用超声波破碎后获得粗酶液,检测破碎液上清中岩藻糖基转移酶的酶活。具体方法为:反应体系为20μL,其中含有0.5μmol/L底物GDP-岩藻糖、20mmol/LMnCI2、1%Triton X-100、50mmol/L甲次胂酸盐-盐酸缓冲液(pH5.8)、0.5nmol/L苯-β-D-半乳糖及重组菌细胞破碎上清液(其中包含总蛋白量0.5mg),总体积为100μL。蛋白质浓度通过布拉德福德方法测定,使用以BSA为标准蛋白质的Bio-Rad蛋白质测定试剂盒。混合液在37℃下孵育1h后,用300μL氯仿/甲醇(2:1,v/v)终止反应,混匀后于12000rpm离心3min,取上清进行HPLC检测,通过HPLC检测反应体系中产物的生成量间接计算重组菌细胞破碎上清液中岩藻糖基转移酶HM26的酶活。HPLC检测2’-FL的方法为:样品处理方法:1.发酵液12000r/min、离心20min,2.取上清500ul,加入终浓度为70%的无水乙醇,-20℃2h,3.再12000r/min、离心20min后取上清液200ul置于液相进样瓶中。色谱柱:Dikma CarboPac Ca2+300x 8.0mm,6μm(Cat.No:99304)流动相:水流速:1.0mL/min检测器:RI柱温:80℃进样量:10μL。酶活定义为在所设定的反应条件下1h生成1pmol产物所需要的酶量为1U。结果显示重组菌BHM26细胞破碎液上清的中酶活为10.8U/mL。
实施例2岩藻糖基转移酶HM26的克隆及产2’-FL重组菌的构建
首先化学合成SEQ ID NO.2的核苷酸序列,用实施例1相同的方法,得到重组质粒pHY-HM26。
接着通过同源重组方式将PLan启动子(核苷酸序列SEQ ID NO.3所示)和木糖异构酶基因的终止子ter(核苷酸序列SEQ ID NO.4所示)分别与磷酸甘露糖变位酶基因manB(其核苷酸序列如SEQ ID NO.5所示)、甘露糖-1-磷酸-鸟苷酸转移酶基因manC(其核苷酸序列如SEQ ID NO.6所示)、GDP-甘露糖-4,6-脱水酶基因gmd(其核苷酸序列如SEQ ID NO.7所示)、GDP-L-岩藻糖合成酶基因wcaG(其核苷酸序列如SEQ ID NO.8所示)连接至载体pHY300-PLK,构成含有4个表达框的质粒pHY-manB,pHY-manC,pHY-gmd,pHY-wcaG。
重组质粒的构建方法如下:
以重组质粒pHY-manB的构建方法为例:使用实施例1中相同的方法分别扩增PLan启动子序列和ter终止子序列;以化学合成的SEQ ID NO.5所示核苷酸序列为模板,使用引物对PF42-F/R扩增manB编码基因序列,然后通过同源重组,将上述三个片段一次性连接至使用HindIII和BamHI双酶切线性化的pHY300-PLK上,转化大肠杆菌,挑取阳性转化子,提取质粒,得到重组质粒pHY-manB。
以化学合成的SEQ ID NO.6所示核苷酸序列为模板,使用引物对PF52-F/R扩增manC编码基因序列,用上述相同方法将基因序列与相应双酶酶切后的质粒连接,得到重组质粒pHY-manC。以化学合成的SEQ ID NO.7所示核苷酸序列为模板,使用引物对PF62-F/R扩增gmd编码基因序列,用上述相同方法将基因序列与相应双酶酶切后的质粒连接,得到重组质粒pHY-gmd。以化学合成的SEQ ID NO.8所示核苷酸序列为模板,使用引物对PF72-F/R扩增wcaG编码基因序列,用上述相同方法将基因序列与相应双酶酶切后的质粒连接,得到重组质粒pHY-wcaG。
以重组质粒pHY-manB为模板,使用引物对P1进行扩增,获得含酶切位点的包括PLan启动子、manB基因和ter终止子的表达盒片段,命名为H1。用相同方法,分别以pHY-manC,pHY-gmd,pHY-wcaG,pHY-HM26为模板,使用引物对P2-P5分别进行扩增,得到相应表达盒片段,分别命名为H1、H2、H3、H4、N5。反应条件为:95℃预变性5min后进入下一循环94℃变性30s,54℃退火30s,72℃延伸40s,30个循环;72℃延伸10min,4℃保温。依次利用同源重组的方法将基因表达片段H1、H2、H3连接入pHY300PLK质粒,得到重组质粒pHY-H123(图1)。再依次利用同源重组的方法将基因表达片段H4和M5连接入pHT43质粒,得到重组质粒pHT-N45(图2)。利用1%琼脂糖凝胶电泳进一步验证质粒的构建情况(图3)。
将成功构建的重组质粒pHYH123按照Li,Y.;Jin,K.;Zhang,L.;Ding,Z.;Gu,Z.;Shi,G.Development of an Inducible Secretory Expression System in Bacilluslicheniformis Based on an Engineered Xylose Operon.Journal ofAgricultural andFood Chemistry 2018,66,9456-9464.的方法转化地衣芽孢杆菌ATCC 9945A,获得地衣芽孢杆菌工程菌BLH1。具体转化方法为:首先挑取新鲜的地衣芽孢杆菌单菌落接种至50mLLBSP培养基(10g·L-1蛋白胨,10g·L-1氯化钠,5g·L-1酵母膏,0.50mol·L-1山梨醇),于37℃,200rpm培养12h。接着,取0.4mL培养液转接至50mL LBS培养基中,于37℃,200rpm培养至菌体浓度达到600nm的吸光度(OD600)为0.6~0.8,冷冻离心(3000g,8min)收集菌体。用20mLSHMP培养基(0.5mol·L-1山梨醇,0.5mol·L-1甘露醇,10%甘油)重悬菌体,然后冷冻离心弃掉上清液以洗涤菌体,总共洗涤4次。完成后用1mL SHMP培养基重悬菌体细胞,取出90μL置于1.5mL离心管,向其中加入200ng左右的质粒,轻轻混匀后冰浴5min。之后将混合物转移到预冷的电转杯中,放入电转仪实施电穿孔,条件为:电压,1000V;时间,5ms。电击后迅速向混合物中加入800μL LBSPG培养基(10g·L-1蛋白胨,10g·L-1氯化钠,5g·L-1酵母膏,0.50mol·L-1山梨醇,0.38mol·L-1甘露醇)并轻轻混匀,于37℃100rpm培养2h,涂布于抗性平板37℃培养。
再将重组质粒pHT-N45以上述相同的方法转化地衣芽孢杆菌工程菌BLH1,获得重组地衣芽孢杆菌菌BLN2。
实施例32’-FL的摇瓶发酵
将实施例2中构建的地衣芽孢杆菌工程菌BLN2在LB平板上划线活化,37℃培养16h后挑取单菌落接种于15mL LB培养基中37℃、250r·min-1培养16h-18h作为种子液,取1mL种子液转接于30mL的摇瓶发酵培养基进行摇瓶发酵,控制初始OD为0.5-1,于37℃或42℃、250r·min-1培养。每隔12h取样,发酵液于4℃、12000r·min-1条件下离心10min,上清液用于检测产物(图4)。结果显示,在42℃培养条件下,工程菌BLN2发酵36h后可以得到2.85g/L的2’-FL,在37℃下,36h发酵液中2’-FL的产量分别为2.71g/L。
实施例4酶学性质表征
(1)重组菌培养基细胞破碎
使用摇瓶发酵培养基对重组菌株BLN2进行发酵,发酵条件为37℃、250rpm,培养时间48h。将发酵液于12000rpm离心10min后,弃上清收集菌体。使用破碎细胞溶液A(10mM磷酸钠缓冲溶液(pH=7.0)+0.5mol·L-1NaCl+3g·L-1溶菌酶)对菌体进行洗涤,重复3次后,仍然用溶液A将菌体稀释至OD600为3,37℃孵育1-1.5h,至可以观察到有絮状的沉淀产生,置于冰上进行细胞破碎,破碎条件设置为每工作1秒停2秒,总破碎时间为8min。待液体澄清后即为破碎成功。12000rpm,10min离心所得到的细胞破碎液。
(2)重组岩藻糖基转移酶HM26的分离纯化
纯化方式采用Mag-Beads His-Tag蛋白纯化磁珠进行纯化。每15mL的离心管里含有蛋白纯化磁珠2-3mL,并配备磁力架。相关操作步骤如下:①磁珠再生:加5mL ddH2O,混匀,磁性分离;加5mL再生缓冲液,混匀,磁性分离操作2次;加5mL ddH2O,混匀,室温旋转5min,磁性分离操作2次;加5mLNi2+再生缓冲液,室温混匀20min,磁性分离;加5mL ddH2O,混匀,磁性分离操作4次。②磁珠预处理:加5mL结合缓冲液,混匀,磁性分离操作2次;③目的蛋白与磁珠结合:在经过预处理的离心管中加入适量的2mg以内的蛋白样品,放置到漩涡振荡器上震荡15s,充分混匀后将离心管置于旋转混合仪上室温20-30min,保证目的蛋白与磁珠的充分结合,结束后进行磁性分离。④磁珠洗涤:加10mL洗涤缓冲液,轻轻翻转后进行磁性分离,操作两次,可收集倾倒出液体。目的:洗去杂蛋白和未结合的蛋白。为避免原离心管壁上非特异性吸附蛋白,可将磁珠转移到新的离心管中。⑤目的蛋白洗脱:加5-8mL洗脱缓冲液,磁性分离操作3次,并收集倾倒出液体。⑥磁珠后处理:加5mL水,磁性分离操作2次;加磁珠保存液5mL,保存于4℃冰箱中。收集纯化的酶液,将其转移至合适大小并经过预处理的透析袋中,过夜透析除去咪唑和盐,中间更换2-3次透析液,结束后测定蛋白浓度。如有必要可对酶液进行超滤浓缩。蛋白质浓度检测:测定蛋白含量参照考马斯亮蓝染液法:取40μL待测样品加到200μL的考马斯亮蓝溶液中,缓慢混匀后静置5min,于595nm处检测溶液吸光值,根据蛋白浓度标准曲线y=0.2215x-0.0006(x为595nm处的吸光值,y为蛋白浓度mg·mL-1,R2=0.9975)计算样品中的蛋白质浓度。
(3)重组岩藻糖基转移酶HM26的比酶活测定
参照实施例1所述方法进行酶活检测。将纯化获得的重组岩藻糖基转移酶HM26纯酶进行反应,反应体系为20μL,其中含有0.5μmol/L底物GDP-岩藻糖、20mmol/L MnCI2、1%Triton X-100、50mmol/L甲次胂酸盐-盐酸缓冲液(pH5.8)、0.5nmol/L苯-β-D-半乳糖及重组岩藻糖基转移酶HM26纯酶0.5mg,总体积为100μL,混合液在37℃下孵育1h后,用300μL氯仿/甲醇(2:1,v/v)终止反应,混匀后于12000rpm离心3min,取上清进行HPLC检测,通过HPLC检测反应体系中产物的生成量间接计算重组岩藻糖基转移酶HM26的酶活,并计算比酶活。比酶活(U/mg)的计算:每毫升样品溶液中的酶活(U)除以其蛋白浓度(mg)。结果显示重组岩藻糖基转移酶HM26纯酶的比酶活为42.4U/mg。
(4)重组岩藻糖基转移酶HM26的温度特性表征
参照以上酶活检测反应的方法,将纯化获得的重组岩藻糖基转移酶HM26纯酶分别在30℃,37℃,42℃和50℃进行反应。反应结束后通过HPLC检测反应体系中底物的减少量和产物的生成量间接计算重组岩藻糖基转移酶HM26的酶活。结果显示42oC条件下的酶活达到109.4U/mL,为37oC条件下酶活的1.3倍,在50oC条件下酶活(102.9U/mL)也高于37oC。
实施例5工程菌BLN2在20L发酵罐内发酵生产2’-FL
将实施例2中构建的地衣芽孢杆菌工程菌BLN2活化后,于37℃培养16h后挑取单菌落接种于15mL LB培养基中37℃、250r·min-1培养16h-18h作为种子液,取1mL种子液转接于30mL的摇瓶发酵培养基,控制初始OD为0.5-1,于发酵温度42℃、初始pH7.5的条件下在发酵罐中进行补料分批发酵。当发酵过程中pH下降到7.0时通过补加50%氨水使得发酵过程中pH维持在7.0左右,发酵过程中通气量控制在0.5vvm,将搅拌与DO偶联控制DO维持在30%左右,转速上限设置为800rpm。发酵8h后以20mL/h的速率连续补加50%的蔗糖溶液,维持其不被耗尽。
发酵培养基:棉籽蛋白30g/L、蔗糖75g/L、乳糖80g/L、K2HPO4·3H2O 9.12g/L、KH2PO41.36g/L、FeCl30.5 g/L、(NH4)2HPO410 g/L(pH7.5)。30L发酵罐装液量15L。发酵罐规模的补料分批发酵46h后2’-FL的产量达到51g/L,最大OD600为73.5。
对比例1:
具体实施方式与实施例2相同,区别在于,将岩藻糖基转移酶基因HM26换为来源于幽门螺杆菌(Helicobacterpylori)的岩藻糖基转移酶futC(GenBank:ABO61750.1),将所构建的重组菌以实施例3和实施例5所示发酵方法进行发酵,发酵温度为42℃,摇瓶发酵生产2’-FL的产量为1.02g/L;20L发酵罐发酵的2’-FL产量为23g/L。
对比例2:
具体实施方式与实施例2相同,区别在于,将岩藻糖基转移酶基因HM26换为来源于大肠杆菌(Escherichia coli O126)的岩藻糖基转移酶wbgL(GenBank:ABO61750.1),将所构建的重组菌以实施例3和实施例5所示发酵方法进行发酵,发酵温度为42℃,摇瓶发酵生产2’-FL的产量为0.82g/L;20L发酵罐发酵的2’-FL产量为17g/L。
虽然本发明已以较佳实施例公开如上,但其并非用以限定本发明,任何熟悉此技术的人,在不脱离本发明的精神和范围内,都可做各种的改动与修饰,因此本发明的保护范围应该以权利要求书所界定的为准。
Claims (10)
1.一种岩藻糖基转移酶,其特征在于,所述岩藻糖基转移酶的氨基酸序列如SEQ IDNO.1所示。
2.编码权利要求1所述岩藻糖基转移酶的基因,其特征在于,所述基因的核苷酸序列如SEQ ID NO.2所示。
3.一种表达岩藻糖基转移酶的重组菌,其特征在于,以细菌或酵母为宿主,表达权利要求1所述的岩藻糖基转移酶。
4.根据权利要求3所述的重组菌,其特征在于,所述宿主为地衣芽孢杆菌。
5.一种构建权利要求3或4所述重组菌的方法,其特征在于,包含以下步骤:
(1)在磷酸甘露糖变位酶基因manB、甘露糖-1-磷酸-鸟苷酸转移酶基因manC、GDP-甘露糖-4,6-脱水酶基因gmd、GDP-L-岩藻糖合成酶基因wcaG以及岩藻糖基转移酶基因的两端分别融合SEQ ID NO.3所示的启动子和SEQ ID NO.4所示的终止子,获得含上述基因的表达片段;
(2)将步骤(1)构建的表达片段以manB、manC与gmd的顺序连接至质粒pHY300PLK上,得到重组质粒1;再将基因wcaG与权利要求2所述基因连接至质粒pHT43,得到重组质粒2;
(3)将步骤(2)构建的重组质粒1、重组质粒2转化至地衣芽孢杆菌,获得重组地衣芽孢杆菌菌。
6.一种生产2’-岩藻糖基乳糖的方法,其特征在于,应用权利要求3或4所述的重组菌,于37℃~42℃发酵至少46h。
7.根据权利要求6所述的方法,其特征在于,用于发酵的培养基含有:棉籽蛋白5-30g/L、蔗糖40-75g/L、乳糖40-80g/L、K2HPO4·3H2O7.28-9.12g/L、KH2PO41.36-3.15g/L、FeCl30.5-1g/L和(NH4)2HPO45-10g/L;初始pH为6.5-7.5。
8.根据权利要求7所述的方法,其特征在于,发酵过程还进行补料,所述补料是在发酵6-10h后补加蔗糖。
9.权利要求1所述岩藻糖基转移酶,或权利要求2所述基因,或权利要求3或4所述重组菌,或权利要求5所述方法,或权利要求6-8任一所述方法在生产2’-岩藻糖基乳糖与含2’-岩藻糖基乳糖的产品中的应用。
10.根据权利要求9所述应用,其特征在于,所述产品包括婴儿配方奶粉。
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202310567614.7A CN116676287A (zh) | 2023-05-19 | 2023-05-19 | 肠道微生物来源的岩藻糖基转移酶及其应用 |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202310567614.7A CN116676287A (zh) | 2023-05-19 | 2023-05-19 | 肠道微生物来源的岩藻糖基转移酶及其应用 |
Publications (1)
Publication Number | Publication Date |
---|---|
CN116676287A true CN116676287A (zh) | 2023-09-01 |
Family
ID=87780098
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202310567614.7A Pending CN116676287A (zh) | 2023-05-19 | 2023-05-19 | 肠道微生物来源的岩藻糖基转移酶及其应用 |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN116676287A (zh) |
-
2023
- 2023-05-19 CN CN202310567614.7A patent/CN116676287A/zh active Pending
Similar Documents
Publication | Publication Date | Title |
---|---|---|
CN112501106B (zh) | 一种生产2’-岩藻糖基乳糖的大肠杆菌及其应用 | |
CN102869783B (zh) | 阿洛酮糖-差向异构酶的固定化以及使用所述阿洛酮糖-差向异构酶制备d-阿洛酮糖的方法 | |
CN114480240A (zh) | 一种产岩藻糖基乳糖的基因工程菌及生产方法 | |
CN114874964B (zh) | 一种高产2′-岩藻糖基乳糖的重组大肠杆菌的构建方法及应用 | |
US20240035057A1 (en) | Construction Method and Application of Microorganism Capable of Realizing High Production of Lacto-N-tetrose | |
CN117660385A (zh) | 一种利用糖基转移酶高效生物合成莱鲍迪苷d的方法 | |
CN111748535A (zh) | 一种丙氨酸脱氢酶突变体及其在发酵生产l-丙氨酸中的应用 | |
CN116917485A (zh) | 表达岩藻糖基转移酶的重组微生物和使用其生产2’-岩藻糖基乳糖的方法 | |
CN112126615B (zh) | 一种产丁酸的枯草芽孢杆菌及其构建方法和应用 | |
DK202170250A1 (en) | Identification of an a-1,2-fucosyltransferase for the in vivo production of pure lnfp-i | |
CN117187206B (zh) | 肠道微生物来源的岩藻糖基转移酶及其应用 | |
CN115838682A (zh) | 一种利用甘露聚糖高效生产2′-岩藻糖基乳糖的地衣芽孢杆菌工程菌株 | |
CN115948314A (zh) | 一种高效生产2’-岩藻糖基乳糖的地衣芽孢杆菌工程菌株 | |
CN116676287A (zh) | 肠道微生物来源的岩藻糖基转移酶及其应用 | |
CN112375725B (zh) | 一种生产维生素b6的代谢工程菌株及其构建方法与应用 | |
CN113122563B (zh) | 构建r-3-氨基丁酸生产菌的方法 | |
CN115725484A (zh) | 合成d-阿洛酮糖的酶突变表达工程菌及应用 | |
CN116640740A (zh) | 肠道微生物来源的岩藻糖基转移酶及其应用 | |
CN113528495A (zh) | 一种稳定表达几丁二糖脱乙酰酶的枯草芽孢杆菌及其构建方法与应用 | |
CN109370969B (zh) | 一种重组克雷伯氏杆菌在制备1,3-丙二醇中的应用 | |
CN112852702A (zh) | 一种重组枯草芽孢杆菌催化高浓度乳糖合成塔格糖的方法 | |
CN111607548B (zh) | 一种产甘露聚糖的重组大肠杆菌及其应用 | |
CN115261367B (zh) | 一种纤维二糖差向异构酶突变体及其应用 | |
EP4410973A1 (en) | Recombinant yeast and application thereof | |
CN116200360B (zh) | 一种futCB突变体及生物合成2’-岩藻糖基乳糖的方法 |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination |