CN113227370A - 一种单链dna合成方法 - Google Patents

一种单链dna合成方法 Download PDF

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CN113227370A
CN113227370A CN201980086128.5A CN201980086128A CN113227370A CN 113227370 A CN113227370 A CN 113227370A CN 201980086128 A CN201980086128 A CN 201980086128A CN 113227370 A CN113227370 A CN 113227370A
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sequence
dna
stranded dna
stranded
uracil
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CN113227370B (zh
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叶露萌
孙海烨
李一凡
吴政宪
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Jiangsu Genscript Biotech Co Ltd
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Abstract

提供了一种单链DNA合成方法,具体为一种无碱基突变的单链DNA的制备工艺,通过尿嘧啶特异性减除酶(USER)介导的双链DNA自动成环结合滚环复制来制备单链DNA。

Description

PCT国内申请,说明书已公开。

Claims (19)

  1. PCT国内申请,权利要求书已公开。
CN201980086128.5A 2018-12-28 2019-12-27 一种单链dna合成方法 Active CN113227370B (zh)

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CN201811624165 2018-12-28
CN2018116241650 2018-12-28
PCT/CN2019/128948 WO2020135651A1 (zh) 2018-12-28 2019-12-27 一种单链dna合成方法

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US (1) US20220042059A1 (zh)
EP (1) EP3904511A4 (zh)
JP (1) JP2022515085A (zh)
KR (1) KR20210110790A (zh)
CN (1) CN113227370B (zh)
IL (1) IL283989A (zh)
TW (1) TW202039838A (zh)
WO (1) WO2020135651A1 (zh)

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Publication number Priority date Publication date Assignee Title
WO2022170707A1 (zh) * 2021-02-10 2022-08-18 清华大学 一种制备定点修饰的长链dna的方法
WO2023072145A1 (zh) 2021-10-26 2023-05-04 南京金斯瑞生物科技有限公司 一种纯化单链dna的方法

Citations (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2007135354A1 (en) * 2006-05-19 2007-11-29 Plant Bioscience Limited Improved uracil-excision based molecular cloning
WO2011017760A1 (en) * 2009-08-12 2011-02-17 Commonwealth Scientific And Industrial Research Organisation Detection and analysis of methylation in nucleic acid sequences
CN102296065A (zh) * 2011-08-04 2011-12-28 盛司潼 用于构建测序文库的系统与方法
CN102719550A (zh) * 2012-07-10 2012-10-10 中国人民解放军第三军医大学第一附属医院 一种基于分裂锁式探针的多重rca方法
CN103255227A (zh) * 2013-05-30 2013-08-21 上海快灵生物科技有限公司 引物介导环化的恒温核酸滚环扩增方法及试剂盒
US20130261027A1 (en) * 2008-01-09 2013-10-03 Life Technologies Corporation Nucleic acid adaptors and uses thereof
US20180044668A1 (en) * 2014-10-14 2018-02-15 Bgi Shenzhen Co., Limited Mate pair library construction
CN108060191A (zh) * 2017-11-07 2018-05-22 深圳华大基因科技有限公司 一种双链核酸片段加接头的方法、文库构建方法和试剂盒
WO2018090373A1 (zh) * 2016-11-21 2018-05-24 深圳华大智造科技有限公司 一种dna末端修复与加a的方法
WO2018121634A1 (zh) * 2016-12-30 2018-07-05 安诺优达基因科技(北京)有限公司 用于dna片段的非特异性复制的方法及试剂盒

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2009120374A2 (en) * 2008-03-28 2009-10-01 Pacific Biosciences Of California, Inc. Methods and compositions for nucleic acid sample preparation
CN105624165B (zh) * 2016-01-05 2018-11-30 山东大学 基于自锁式适体探针的级联扩增策略的生物分子检测方法

Patent Citations (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2007135354A1 (en) * 2006-05-19 2007-11-29 Plant Bioscience Limited Improved uracil-excision based molecular cloning
US20130261027A1 (en) * 2008-01-09 2013-10-03 Life Technologies Corporation Nucleic acid adaptors and uses thereof
WO2011017760A1 (en) * 2009-08-12 2011-02-17 Commonwealth Scientific And Industrial Research Organisation Detection and analysis of methylation in nucleic acid sequences
CN102296065A (zh) * 2011-08-04 2011-12-28 盛司潼 用于构建测序文库的系统与方法
CN102719550A (zh) * 2012-07-10 2012-10-10 中国人民解放军第三军医大学第一附属医院 一种基于分裂锁式探针的多重rca方法
CN103255227A (zh) * 2013-05-30 2013-08-21 上海快灵生物科技有限公司 引物介导环化的恒温核酸滚环扩增方法及试剂盒
US20180044668A1 (en) * 2014-10-14 2018-02-15 Bgi Shenzhen Co., Limited Mate pair library construction
WO2018090373A1 (zh) * 2016-11-21 2018-05-24 深圳华大智造科技有限公司 一种dna末端修复与加a的方法
WO2018121634A1 (zh) * 2016-12-30 2018-07-05 安诺优达基因科技(北京)有限公司 用于dna片段的非特异性复制的方法及试剂盒
CN108060191A (zh) * 2017-11-07 2018-05-22 深圳华大基因科技有限公司 一种双链核酸片段加接头的方法、文库构建方法和试剂盒

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
BITINATE, J: "USER Friendly DNA Engineering and Cloning Method by Uracil Excision", NUCLEIC ACIDS RESEARCH, pages 1362 - 4962 *
JINFENG CHEN: "Enzyme-free synthesis of cyclic single-stranded DNA constructs containing a single triazole, amide or phosphoramidate backbone linkage and their use as templates for rolling circle amplification and nanoflower formation", CHEM. SCI, pages 8110 - 8120 *
M. MONSUR ALI: "Rolling circle amplification: a versatile tool for chemical biology, materials science and medicine", CHEM. SOC. REV, pages 3324 - 3341 *
李启明: "滚环复制技术的建立及在RNA病毒基因检测中的初步应用", 病毒学报, 25 August 2005 (2005-08-25) *
贾友礼: "基于序列信息高度集成的长单链DNA自组装及制备", 科学通报, 16 October 2018 (2018-10-16) *

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WO2020135651A1 (zh) 2020-07-02
KR20210110790A (ko) 2021-09-09
EP3904511A1 (en) 2021-11-03
EP3904511A4 (en) 2022-03-09
US20220042059A1 (en) 2022-02-10
IL283989A (en) 2021-07-29
JP2022515085A (ja) 2022-02-17
CN113227370B (zh) 2024-04-09
TW202039838A (zh) 2020-11-01

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