CN112725522A - Golden needle mushroom 1767 strain and identification method and construction method and application of SSR marker fingerprint spectrum thereof - Google Patents

Golden needle mushroom 1767 strain and identification method and construction method and application of SSR marker fingerprint spectrum thereof Download PDF

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CN112725522A
CN112725522A CN202110269726.5A CN202110269726A CN112725522A CN 112725522 A CN112725522 A CN 112725522A CN 202110269726 A CN202110269726 A CN 202110269726A CN 112725522 A CN112725522 A CN 112725522A
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ssr
dna
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王瑞娟
陆欢
徐珍
刘建雨
尚晓冬
张美彦
章炉军
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Shanghai Academy of Agricultural Sciences
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    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
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Abstract

The invention discloses a golden needle mushroom 1767 strain and an identification method and a construction method and application of an SSR marker fingerprint spectrum thereof, wherein the fingerprint spectrum consists of 6 pairs of SSR markers. The construction method comprises the following steps: (1) culturing hyphae; (2) extracting genome DNA; (3) detecting SSR molecular markers; (4) and (5) detecting by capillary electrophoresis. The application comprises the following steps: performing SSR marker amplification on the flammulina velutipes strains, comparing the obtained banding patterns with the fingerprint spectrum, and obtaining the flammulina velutipes golden 1767 strains if the banding patterns are consistent with the fingerprint spectrum. Compared with conventional morphological detection, antagonism test and fruiting test, the method has the advantages of short detection time, high accuracy and good repeatability, and has the specificity of golden 1767 strains in 105 collected main culture strains for golden mushroom cultivation at home and abroad.

Description

Golden needle mushroom 1767 strain and identification method and construction method and application of SSR marker fingerprint spectrum thereof
Technical Field
The invention belongs to the technical field of detection of flammulina velutipes strains, and particularly relates to a flammulina velutipes golden 1767 strain and an identification method, a construction method and application of an SSR marker fingerprint spectrum thereof.
Background
Flammulina velutipes (Flammulina filiformis) is a commonly cultivated edible fungus, and is generally classified into white and yellow varieties. The cultivation history is long, the total production amount is promoted year by year, and the strain is the fastest-developing and largest-scale strain in industrialized edible fungus enterprises in China at present. The daily yield of the industrial cultivation of the flammulina velutipes in China approximately accounts for 47.12 percent of the total industrial yield of the edible fungi in China. The needle mushroom is rich in nutrition, delicious in taste and high in medicinal value, is rich in various nutritional ingredients such as proteins, minerals and vitamins, has various medicinal health-care effects of resisting tumors, enhancing immunity regulation, resisting viruses, reducing blood fat, resisting fatigue, protecting liver and the like, and is popular with consumers.
The contribution rate of the high-quality strains in the yield per unit and the quality of the flammulina velutipes is significant. The industrialized culture strain of flammulina velutipes in China is mainly white strain which is bred abroad and has high first tide yield, short growth period and storage tolerance. Compared with foreign countries, the domestic needle mushroom breeding work is relatively lagged, and the reason for the small market share of the domestic strains is also caused. But compared with the current leading industrialized strains, China has rich wild and natural flammulina velutipes cultivation resources, the high-quality resources are efficiently utilized, the genetic basis of the strains is expanded, and the breeding of the domestic high-yield, high-quality and characteristic flammulina velutipes strains is facilitated. In 1999, China signed the protection law of new species of international plants, which not only required us to respect the intellectual property rights of species in other countries, but also strengthened the protection of the intellectual property rights of species in our country. In order to establish a new species registration system of edible fungi to really protect the property rights of species in China, a mature species identification technology must be established at first to lay a foundation for registering the new species. In China, the phenomenon of product homogenization caused by low diversity of needle mushroom culture strains not only brings economic loss to production enterprises, but also greatly influences the rapid development of the needle mushroom industry in China; on the other hand, the requirements of industrial cultivation modes and strain degeneration phenomena on the quality of needle mushroom cultivation strains are higher and higher, and a simpler, faster and more accurate strain identification technology needs to be developed so as to ensure that each batch of strains used is a high-quality and accurate strain.
Aiming at the current development situation of the flammulina velutipes industry, the development of an accurate and effective flammulina velutipes strain identification system by utilizing the modern molecular biology technology is an extremely important work.
Disclosure of Invention
Golden needle mushroom (Flammulina filiformis) gold 1767 is preserved in Guangdong province microorganism strain preservation center in 2021, 22 months, and addresses No. 59 floor 5 of Michelia Tokyo 100, Guangzhou, with the preservation number GDMCC No: 61485.
the invention aims to solve the technical problem of providing an SSR marker fingerprint of a golden mushroom 'golden 1767' strain and a construction method and application thereof, and the fingerprint has the advantages of short detection time, high accuracy and good repeatability compared with conventional morphological detection, antagonistic test and fruiting test.
The SSR marker fingerprint of the golden mushroom 'golden 1767' strain consists of 6 pairs of SSR markers, SSR primers are developed based on simple repetitive sequence fragments of golden mushroom genomes, the SSR primers have good amplification band types and high repeatability, and detailed marker information is shown in a table 1:
TABLE 1 SSR tag detailed information List
Figure BDA0002973752930000021
The invention relates to a method for constructing an SSR marker fingerprint of a golden mushroom 'Jin1767' strain, which comprises the following steps:
(1) hypha culture: inoculating needle mushroom strain to potato glucose agar solid culture medium (PDA), culturing at 25 deg.C for 7d, and collecting mycelium;
(2) extraction of genomic DNA: extracting the genome DNA of the hyphae by using a TaqHotStart amplification kit of TAKARA, detecting the concentration and purity of the total genome DNA by an ultraviolet spectrophotometry, and adjusting the concentration of the sample DNA to be consistent;
(3) detection of SSR molecular markers: carrying out PCR amplification of gene SSR markers on the extracted DNA;
(4) and (3) electrophoresis detection: mixing the product obtained by PCR amplification with formamide sample adding buffer solution, denaturing, and detecting on a computer;
(5) GeneMapper data analysis.
The specific process for extracting the genome DNA of the hyphae by the kit method in the step (2) comprises the following steps:
(1) adding liquid nitrogen into the hypha sample, and fully grinding;
(2) adding 360 mu L of Buffer STE and 40 mu L of Buffer SDS into the ground powder quickly, quickly whirling and uniformly mixing, placing the centrifuge tube in a water bath at 65 ℃ for 15min, and reversing the centrifuge tube in the water bath process to mix the sample for a plurality of times;
(3) adding 5 μ L RNase Solution into the lysate, mixing by vortex, and standing at room temperature for 15-30 min;
(4) adding 140 mu L of buffer PS, vortexing and shaking for 30s, and standing on ice for 10 min;
(5) 13000g was centrifuged for 5min at room temperature, and 400. mu.L of the supernatant was carefully transferred to a new centrifuge tube;
(6) add 600. mu.L Buffer PBD (diluted with absolute ethanol) to the sample, vortex and mix for 30 s;
(7) loading the DNA binding column in a collecting tube, transferring half of the mixed solution to the column, and centrifuging at 8000g for 1 min;
(8) pouring off the filtrate, putting the column back into the collecting pipe, transferring the residual mixed solution into the column, and centrifuging for 1min at 8000 g;
(9) pouring the filtrate and putting the column back into the collecting tube, adding 600 μ L Buffer GW2 (diluted with absolute ethyl alcohol) into the column, and centrifuging at 8000g for 1 min;
(10) repeating the step 9;
(11) pouring off the filtrate, putting the column back into the collecting pipe, centrifuging for 2min at 10000g to remove the residual ethanol in the column;
(12) transferring the column to a new 1.5ml centrifuge tube, adding 30 μ L of Buffer AE preheated to 65 deg.C to the center of the membrane of the column, standing at room temperature for 2min, centrifuging at 10000g for 1 min;
(13) mu.L of DNA was subjected to 1.2% agarose gel electrophoresis, 2. mu.L of DNA was subjected to NanoDrop spectrophotometry, and the remaining DNA was stored at-20 ℃.
The PCR amplification system in the step (3) is as follows: total volume 10 μ L, including: 10 XPCR buffer 1 uL, 2.5mmol/L dNTP 0.8 uL, 5U/uL HSTaq DNA enzyme 0.1 uL, 5 umol/L SSR mark forward primer and reverse primer total volume 0.6 uL respectively, template DNA extracted with concentration of 20 ng-30 ng/uL 1 uL, ddH2O 5.9μL;
And (3) PCR reaction conditions: 5min at 95 ℃; 30second at 95 ℃, 30second at 60 ℃, 30second at 72 ℃, 35 cycles; 30min at 60 ℃.
The sample adding buffer solution in the step (4) is 9 mu L of mixed solution of molecular weight internal standard and formamide (0.5: 8.5); the amount of the PCR amplification product added was 1. mu.L.
The specific process of denaturation in the step (4) is to denature at 95 ℃ for 3min, and then to cool in an ice-water mixture for 3 min.
The electrophoresis in the step (4) has the following technological parameters: the modified polyacrylamide gel is commercial POP7 gel, the electrophoresis buffer solution is 3730buffer EDTA, the injection voltage is 2000V, the running voltage is 15000V, the sample injection time is 10s, the temperature is 60 ℃, the capillary length is 50cm, the power is 200W, the electrophoresis is performed for 20min, and the current and the power are dynamic.
The data analysis in the step (5) is specifically as follows: and (3) importing the detected original data file into analysis software genemapper ID3.2, and performing group structure analysis, clustering and heterozygosity analysis and core germplasm resource calculation analysis by using POPGENE, NTSYS and other software. Allele factors (Na, Ne), Nei's genetic diversity index (He), shannon's diversity information index (I) and gene observation heterozygosity (Ho) were analyzed.
TABLE 2 summary of allelic fragment information from SSR primer amplification
Figure BDA0002973752930000041
Figure BDA0002973752930000051
Figure BDA0002973752930000061
The invention discloses an application of an SSR marker fingerprint of a golden mushroom 'golden 1767' strain, which is characterized in that 6 pairs of SSR primers are developed by utilizing simple repetitive sequence segments of golden mushroom genomes, a large number of SSR primers are screened, the number of allelic segments amplified by the 6 pairs of SSR primers in each golden mushroom culture is determined and numbered (table 2) by performing banding amplification on the collected SSR primers of 105 main golden mushroom cultures, and the golden 1767 strain can be effectively identified in the collected 105 main needle mushroom cultures through the number combination of different SSR allelic sites. The relative molecular weight of the allelic locus amplified by each SSR primer can be determined by analyzing by capillary electrophoresis combined with software, the strain with the specific SSR allelic fragment combination of the strain Jin1767 is the strain Jinzhen 1767 of the flammulina velutipes, and the numbering combination of the strain is as follows: (2+8)/(1+4)/(2+8)/(6+11)/7/(3+6).
The invention has the beneficial effects that: compared with conventional morphological detection, antagonism test and fruiting test, the method has the advantages of short detection time, high accuracy and good repeatability. The operation time required for detection is within 24h (including genome DNA extraction, PCR amplification, electrophoresis analysis and data analysis), while the time required for a conventional antagonism test is at least two weeks, and the time required for a fruiting test is at least 3 months; the method has specificity of 'gold 1767' strains in 105 collected main culture strains of the commercially available flammulina velutipes (including Fv-DY, Fv-FY, Fv-SB, Fv-CYS, Fv-YH, Fv-KL, Fv-MG, Fv-MH, Fv-MI, Fv-MJ, Fv-SY, Fv-FM, Fv-WC, Fv-GF, Fv-BY, Fv-HL, Fv-RYJ, Fv-XH, Fv-HTC, Fv-GR and the like), and has good application prospect.
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In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the drawings needed to be used in the description of the embodiments will be briefly introduced below, and it is obvious that the drawings in the following description are only some embodiments of the present invention, and it is obvious for those skilled in the art to obtain other drawings based on these drawings without inventive exercise. Wherein:
FIG. 1 is a diagram of allelic locus relative molecular weight peaks obtained by sequential detection of primers FfSSR2 in selected needle mushroom cultivation material 'gold 1767' and several main cultivation commercial varieties respectively;
FIG. 2 is a diagram of allelic locus relative molecular weight peaks obtained by sequential detection of primers FfSSR10 in selected needle mushroom cultivation material 'gold 1767' and several main cultivation commercial varieties respectively;
FIG. 3 is a diagram of the peak of the relative molecular weight of the allelic site obtained by the primer FfSSR13 respectively and sequentially detected in the selected needle mushroom cultivation material 'gold 1767' and several main cultivation commercial varieties;
FIG. 4 is a diagram of the allelic site relative molecular weight peaks obtained by sequential detection of the primers FfSSR15 in the selected needle mushroom cultivation material 'gold 1767' and several main cultivation commercial varieties respectively;
FIG. 5 is a diagram of the allelic site relative molecular weight peaks obtained by sequential detection of the primers FfSSR16 in the selected needle mushroom cultivation material 'gold 1767' and several main cultivation commercial varieties respectively;
FIG. 6 is a diagram of the peak of the relative molecular weight of the allelic site obtained by the primer FfSSR19 detected in turn in the selected needle mushroom cultivation material "Jin1767" and several main cultivation commercial varieties respectively.
FIG. 7 is a diagram of the fruiting body of "jin 1767".
Detailed Description
In order to make the aforementioned objects, features and advantages of the present invention comprehensible, embodiments accompanied with examples are described in detail below.
In the following description, numerous specific details are set forth in order to provide a thorough understanding of the present invention, but the present invention may be practiced in other ways than those specifically described and will be readily apparent to those of ordinary skill in the art without departing from the spirit of the present invention, and therefore the present invention is not limited to the specific embodiments disclosed below.
Furthermore, reference herein to "one embodiment" or "an embodiment" means that a particular feature, structure, or characteristic described in connection with the embodiment is included in at least one implementation of the invention. The appearances of the phrase "in one embodiment" in various places in the specification are not necessarily all referring to the same embodiment, nor are separate or alternative embodiments mutually exclusive of other embodiments.
"jin 1767" is a good variety obtained by systematic breeding. The parent source of the strain is yellow strain FV0618, which is a strain collected in the edible fungus institute of Shanghai agricultural academy of sciences. FV0618 has the advantages that the surface pigment of the bacterial colony is less, the color of the pileus is yellow, and the color uniformity of the stipe is higher; the disadvantages are longer growth period and lower yield.
Selecting fresh and healthy FV0618 sporophore on an ultraclean workbench, wiping the sterilized surface with 75% alcohol, longitudinally cutting the sporophore, taking the part of the pileus connected with the stipe and the middle part of the stipe for tissue separation, placing on a PDA culture medium, culturing for 7-10 days in a dark place at about 21 ℃, selecting front-end hypha with thicker and white hypha and fast growth, transferring to the PDA culture medium for continuous culture, and purifying to obtain the strain FV0618-28 with fast hypha growth. Cultivating the fruiting body under the condition of industrial cultivation, screening fruiting bodies by taking the growth speed of hypha, the growth period, the color, the yield and the like as indexes, and performing two times of tissue separation, purification, cultivation fruiting and screening again. The fruiting body with fast growth speed, short growth period, yellow color and high yield is screened out, and the strain is named as 'gold 1767'.
The hypha of the golden 1767 strain is pure white, and the surface pigment of the bacterial colony is less; the color of the pileus is yellow, and the color of the stipe and the base are yellow; the pileus is hemispherical, the edge of the pileus almost has no inner roll, the pileus is medium in size, the stipe is medium in length, and the stipe is medium in thickness; fruiting time of the fruiting body is earlier and is 2 days earlier than that of the parent.
Example 1:
(1) hypha culture: inoculating needle mushroom strain to potato glucose agar solid culture medium (PDA), culturing at 25 deg.C for 7d, and collecting mycelium;
(2) extraction of genomic DNA: extracting the genome DNA of the hyphae by using a TaqHotStart amplification kit of TAKARA, detecting the concentration and purity of the total genome DNA by an ultraviolet spectrophotometry, and adjusting the concentration of the sample DNA to be consistent;
the CTAB method for extracting genome DNA of hyphae comprises the following steps:
adding a hypha sample into liquid nitrogen for fully grinding;
quickly adding 360 mu L of Buffer STE and 40 mu L of Buffer SDS into the ground powder, quickly whirling and uniformly mixing, placing the centrifugal tube in a water bath at 65 ℃ for 15min, and reversing the centrifugal tube in the water bath process to mix the sample for multiple times;
③ adding 5 mu L of RNase Solution into the lysate, uniformly mixing by vortex, and standing for 15-30min at room temperature;
adding 140 mu L of Buffer PS, carrying out vortex oscillation for 30s, and standing on ice for 10 min;
at room temperature, 13000g is centrifuged for 5min, and 400 mu L of supernatant is carefully transferred to a new centrifuge tube;
sixthly, 600 mu L of Buffer PBD (diluted by absolute ethyl alcohol) is added into the sample, and vortex mixing is carried out for 30 s;
seventhly, the DNA binding column is arranged in a collecting pipe, half of the mixed solution is transferred into the column, and 8000g of the mixed solution is centrifuged for 1 min;
eighthly, pouring the filtrate, putting the column back into a collecting pipe, transferring the residual mixed liquid into the column, and centrifuging for 1min at 8000 g;
ninthly, pouring the filtrate, putting the column back to the collecting pipe, adding 600 mu L of Buffer GW2 (diluted by absolute ethyl alcohol) into the column, and centrifuging for 1min at 8000 g;
r repeats step 9;
Figure BDA0002973752930000091
pouring off the filtrate, putting the column back into the collecting pipe, centrifuging for 2min at 10000g to remove the residual ethanol in the column;
Figure BDA0002973752930000092
the column was transferred to a fresh 1.5ml centrifuge tube and 30. mu.l was addedL preheating Buffer AE at 65 ℃ to the center of the membrane of the column, standing at room temperature for 2min, centrifuging at 10000g for 1 min;
Figure BDA0002973752930000093
mu.L of DNA was subjected to 1.2% agarose gel electrophoresis, 2. mu.L of DNA was subjected to NanoDrop spectrophotometry, and the remaining DNA was stored at-20 ℃.
(3) Detection of SSR molecular markers: carrying out PCR amplification of gene SSR markers on the extracted DNA;
the PCR amplification system is as follows: total volume 10 μ L, including: 10 XPCR buffer 1 uL, 2.5mmol/L dNTP 0.8 uL, 5U/uL HSTaq DNA enzyme 0.1 uL, 5 umol/L SSR mark forward primer and reverse primer total volume 0.6 uL respectively, template DNA extracted with concentration of 20 ng-30 ng/uL 1 uL, ddH2O 5.9μL;
And (3) PCR reaction conditions: 5min at 95 ℃; 30second at 95 ℃, 30second at 60 ℃, 30second at 72 ℃, 35 cycles; 30min at 60 ℃.
(4) And (3) electrophoresis detection: mixing the product obtained by PCR amplification with 1 μ L sample buffer solution, denaturing at 95 deg.C for 3min, and cooling in ice water mixture for 3 min; 3 mu L of sample is applied to a modified polyacrylamide gel for electrophoresis, the modified polyacrylamide gel is commercial POP7 gel, the electrophoresis buffer solution is 3730buffer EDTA, the injection voltage is 2000V, the operation voltage is 15000V, the sample injection time is 10s, the temperature is 60 ℃, the length of a capillary is 50cm, the power is 200W, the electrophoresis is 20min, the current and the power are dynamic,
(5) analysis of results
Performing PCR amplification and capillary electrophoresis on needle mushroom strains by adopting 6 pairs of SSR primers, and finding a matched code combination by analyzing allele factors (Na, Ne), Nei's genetic diversity index (He), shannon's diversity information index (I) and gene observation heterozygosity (Ho) in combination with a relative molecular weight peak diagram of an allele: FfSSR2, FfSSR10, FfSSR13, FfSSR15, FfSSR16 and FfSSR18, and the corresponding band types are: the strain of (2+8)/(1+4)/(2+8)/(6+11)/7/(3+6) can be determined to be the golden 1767 strain of the golden mushroom. To ensure the accuracy of the identification, three replicates were recommended.
Taking several main commercial varieties as examples, the peak diagrams of the relative molecular weights of the allelic sites obtained BY 6 pairs of primers through sequential detection are shown in the diagrams 1-6 (gold 1767, Fv-SY, Fv-FM, Fv-WC, Fv-GF, Fv-By, Fv-HL, Fv-RYJ, Fv-XH Fv-HTC)
Figure BDA0002973752930000094
Fv-GR). The fingerprint spectrum of the invention refers to the combination of the primer and the band type thereof.
It should be noted that the above-mentioned embodiments are only for illustrating the technical solutions of the present invention and not for limiting, and although the present invention has been described in detail with reference to the preferred embodiments, it should be understood by those skilled in the art that modifications or equivalent substitutions may be made on the technical solutions of the present invention without departing from the spirit and scope of the technical solutions of the present invention, which should be covered by the claims of the present invention.
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Claims (10)

1. An identification method of an SSR marker fingerprint of a golden mushroom 1767 strain is characterized in that: the fingerprint comprises 6 pairs of SSR markers, and the specific sequence is as follows:
Figure FDA0002973752920000011
2. the method for constructing the SSR marker fingerprint spectrum of the golden mushroom 1767 strain as claimed in claim 1, is characterized in that: comprises the steps of (a) preparing a mixture of a plurality of raw materials,
(1) hypha culture: inoculating needle mushroom strain to potato glucose agar solid culture medium, culturing at 25 deg.C for 7d, and collecting mycelium;
(2) extraction of genomic DNA: extracting the genome DNA of the hyphae by using a TaqHotStart amplification kit of TAKARA, detecting the concentration and purity of the total genome DNA by an ultraviolet spectrophotometry, and adjusting the concentration of the sample DNA to be consistent;
(3) detection of SSR molecular markers: carrying out PCR amplification of gene SSR markers on the extracted DNA;
(4) and (3) electrophoresis detection: mixing the product obtained by PCR amplification with formamide sample adding buffer solution, denaturing, and detecting on a computer;
(5) GeneMapper data analysis.
3. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: the step (2) of extracting the genome DNA comprises the following specific steps:
(1) adding liquid nitrogen into the hypha sample, and fully grinding;
(2) adding 360 mu L of Buffer STE and 40 mu L of Buffer SDS into the ground powder quickly, quickly whirling and uniformly mixing, placing the centrifuge tube in a water bath at 65 ℃ for 15min, and reversing the centrifuge tube in the water bath process to mix the sample for a plurality of times;
(3) adding 5 μ L RNase Solution into the lysate, mixing by vortex, and standing at room temperature for 15-30 min;
(4) adding 140 mu LBuffERPS, vortexing and shaking for 30s, and standing on ice for 10 min;
(5) 13000g was centrifuged for 5min at room temperature, and 400. mu.L of the supernatant was carefully transferred to a new centrifuge tube;
(6) add 600 u LBufferPBD to the sample, vortex and mix for 30 s;
(7) loading the DNA binding column in a collecting tube, transferring half of the mixed solution to the column, and centrifuging at 8000g for 1 min;
(8) pouring off the filtrate, putting the column back into the collecting pipe, transferring the residual mixed solution into the column, and centrifuging for 1min at 8000 g;
(9) pouring the filtrate and putting the column back into the collecting pipe, adding 600 mu L of Buffer GW2 into the column, and centrifuging for 1min at 8000 g;
(10) repeating the step 9;
(11) pouring off the filtrate, putting the column back into the collecting pipe, centrifuging for 2min at 10000g to remove the residual ethanol in the column;
(12) transferring the column to a new 1.5ml centrifuge tube, adding 30 μ L of Buffer AE preheated to 65 deg.C to the center of the membrane of the column, standing at room temperature for 2min, centrifuging at 10000g for 1 min;
(13) mu.L of DNA was subjected to 1.2% agarose gel electrophoresis, 2. mu.L of DNA was subjected to NanoDrop spectrophotometry, and the remaining DNA was stored at-20 ℃.
4. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: in the step (3), the PCR amplification is carried out by using an amplification system: total volume 10 μ L, including: 10 XPCR buffer 1 uL, 2.5mmol/L dNTP 0.8 uL, 5U/uL HSTaq DNA enzyme 0.1 uL, 5 umol/L SSR mark forward primer and reverse primer total volume 0.6 uL respectively, template DNA extracted with concentration of 20 ng-30 ng/uL 1 uL, ddH2O 5.9μL;
And (3) PCR reaction conditions: 5min at 95 ℃; 30second at 95 ℃, 30second at 60 ℃, 30second at 72 ℃, 35 cycles; 30min at 60 ℃.
5. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: in the step (4), the product obtained by the PCR amplification is uniformly mixed with a formamide sample adding buffer solution, wherein the volume ratio of the molecular weight internal standard of the sample adding buffer solution to formamide is 0.5: 8.5, the volume of the molecular weight internal standard of the sample adding buffer solution and formamide is totally 9 mu L; the amount of the PCR-amplified product added was 1. mu.L.
6. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: in the step (4), the denaturation is carried out for 3min at 95 ℃, and then the mixture is placed in an ice-water mixture for cooling for 3 min.
7. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: in the step (4), the modified polyacrylamide gel of the electrophoresis is commercial POP7 gel, the electrophoresis buffer solution is 3730buffer EDTA, the injection voltage is 2000V, the operation voltage is 15000V, the sample injection time is 10s, the temperature is 60 ℃, the length of the capillary is 50cm, the power is 200W, the electrophoresis is 20min, and the current and the power are dynamic.
8. The method for constructing an SSR marker fingerprint of golden mushroom 1767 strain according to claim 2, characterized in that: in the step (5), the data analysis is to import the original data file into analysis software genemapper ID3.2, perform group structure analysis, clustering and heterozygosity analysis by using POPGENE and NTSYS software, and perform core germplasm resource calculation analysis; allele factors (Na, Ne), Nei's genetic diversity index (He), shannon's diversity information index (I) and gene observation heterozygosity (Ho) were analyzed.
9. The application of the SSR labeled fingerprint spectrum of the golden mushroom 1767 strain of claim 1 is characterized in that: the SSR marked fingerprint of the golden needle mushroom 1767 strain is used for identifying the specific allelic variation of the golden needle mushroom 1767 strain and/or identifying the specificity of the golden needle mushroom 1767 strain.
10. The golden mushroom 1767 strain has a preservation number of 61485.
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115474510A (en) * 2022-05-20 2022-12-16 上海市农业科学院 Lysimachia flava, cultivation method thereof and molecular identification method

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115474510A (en) * 2022-05-20 2022-12-16 上海市农业科学院 Lysimachia flava, cultivation method thereof and molecular identification method
CN115474510B (en) * 2022-05-20 2024-01-09 上海市农业科学院 Desmodium flavum, cultivation method and molecular identification method thereof

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