CN105283555A - 核酸序列的合成和富集 - Google Patents

核酸序列的合成和富集 Download PDF

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Publication number
CN105283555A
CN105283555A CN201480013111.4A CN201480013111A CN105283555A CN 105283555 A CN105283555 A CN 105283555A CN 201480013111 A CN201480013111 A CN 201480013111A CN 105283555 A CN105283555 A CN 105283555A
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sequence
reference sequences
blocker
temperature
target
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CN201480013111.4A
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Chinese (zh)
Inventor
詹森·普尔
赛格·汉考克
卡伦纳·科斯科
弗拉达·梅尔尼科娃
彼得·裘槎
蒂姆·卢
马克·G·厄兰德
艾琳·萨穆埃尔兹
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Cardiff Oncology Inc
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Xenomics Inc
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Application filed by Xenomics Inc filed Critical Xenomics Inc
Priority claimed from PCT/US2014/061435 external-priority patent/WO2015073163A2/en
Publication of CN105283555A publication Critical patent/CN105283555A/zh
Pending legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • CCHEMISTRY; METALLURGY
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    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Pathology (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN201480013111.4A 2013-10-20 2014-10-20 核酸序列的合成和富集 Pending CN105283555A (zh)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
US201361893283P 2013-10-20 2013-10-20
US201361904141P 2013-11-14 2013-11-14
US61/904,141 2013-11-14
US201462039905P 2014-08-20 2014-08-20
US62/039,905 2014-08-20
US61/893,283 2014-10-20
PCT/US2014/061435 WO2015073163A2 (en) 2013-11-14 2014-10-20 Synthesis and enrichment of nucleic acid sequences

Publications (1)

Publication Number Publication Date
CN105283555A true CN105283555A (zh) 2016-01-27

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CN201480013111.4A Pending CN105283555A (zh) 2013-10-20 2014-10-20 核酸序列的合成和富集

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US (2) US20160273022A1 (https=)
JP (1) JP2016535987A (https=)
CN (1) CN105283555A (https=)

Cited By (7)

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CN106755451A (zh) * 2017-01-05 2017-05-31 苏州艾达康医疗科技有限公司 核酸制备及分析
CN107012221A (zh) * 2016-10-14 2017-08-04 苏州艾达康医疗科技有限公司 基于阻断物的富集系统及其应用
CN108179191A (zh) * 2018-02-05 2018-06-19 广州市达瑞生物技术股份有限公司 一种检测人类ctDNA基因突变的试剂盒
CN108410982A (zh) * 2018-02-05 2018-08-17 广州市达瑞生物技术股份有限公司 一种基于maldi-tof-ms检测肺癌34个突变位点的试剂盒
CN109762901A (zh) * 2019-01-30 2019-05-17 杭州瑞普基因科技有限公司 用于富集低频dna突变的dna探针应用于多种突变的同时检测
CN111004839A (zh) * 2019-12-18 2020-04-14 杭州瑞普基因科技有限公司 基于锁核酸修饰的阻滞物进行阻滞取代扩增富集检测目标突变的方法
CN115287338A (zh) * 2022-07-04 2022-11-04 苏州唯善生物科技有限公司 一种提高数字pcr灵敏度的检测方法

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CN105190656B (zh) 2013-01-17 2018-01-16 佩索纳里斯公司 用于遗传分析的方法和系统
US10125399B2 (en) 2014-10-30 2018-11-13 Personalis, Inc. Methods for using mosaicism in nucleic acids sampled distal to their origin
LT3298162T (lt) * 2015-05-18 2020-03-10 Saga Diagnostics Ab Tikslinės nukleorūgšties ir variantų aptikimas
US11299783B2 (en) 2016-05-27 2022-04-12 Personalis, Inc. Methods and systems for genetic analysis
WO2019022132A1 (ja) * 2017-07-26 2019-01-31 積水メディカル株式会社 変異遺伝子検出方法
US10801064B2 (en) 2018-05-31 2020-10-13 Personalis, Inc. Compositions, methods and systems for processing or analyzing multi-species nucleic acid samples
US11814750B2 (en) 2018-05-31 2023-11-14 Personalis, Inc. Compositions, methods and systems for processing or analyzing multi-species nucleic acid samples
CN109632938B (zh) * 2019-01-11 2021-03-16 中国科学院化学研究所 聚多巴胺修饰的银纳米颗粒在质谱分析检测中的应用
EP4055610A4 (en) 2019-11-05 2023-11-29 Personalis, Inc. ESTIMATION OF TUMOR PURITY FROM SINGLE SAMPLES
EP4413580A4 (en) 2021-10-05 2025-08-13 Personalis Inc PERSONALIZED TESTS FOR PERSONALIZED CANCER MONITORING

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CN101815789A (zh) * 2007-08-01 2010-08-25 达纳-法伯癌症研究院有限公司 靶序列的富集
CN102859003A (zh) * 2010-03-08 2013-01-02 达纳-法伯癌症研究院有限公司 使用参考封闭序列的全cold-pcr富集

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Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN107012221A (zh) * 2016-10-14 2017-08-04 苏州艾达康医疗科技有限公司 基于阻断物的富集系统及其应用
CN106755451A (zh) * 2017-01-05 2017-05-31 苏州艾达康医疗科技有限公司 核酸制备及分析
CN108179191A (zh) * 2018-02-05 2018-06-19 广州市达瑞生物技术股份有限公司 一种检测人类ctDNA基因突变的试剂盒
CN108410982A (zh) * 2018-02-05 2018-08-17 广州市达瑞生物技术股份有限公司 一种基于maldi-tof-ms检测肺癌34个突变位点的试剂盒
CN109762901A (zh) * 2019-01-30 2019-05-17 杭州瑞普基因科技有限公司 用于富集低频dna突变的dna探针应用于多种突变的同时检测
CN111004839A (zh) * 2019-12-18 2020-04-14 杭州瑞普基因科技有限公司 基于锁核酸修饰的阻滞物进行阻滞取代扩增富集检测目标突变的方法
CN115287338A (zh) * 2022-07-04 2022-11-04 苏州唯善生物科技有限公司 一种提高数字pcr灵敏度的检测方法

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JP2016535987A (ja) 2016-11-24
US20160273022A1 (en) 2016-09-22
US20170009276A1 (en) 2017-01-12
US9725755B2 (en) 2017-08-08

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Application publication date: 20160127