CN104619854B - 用于酶介导的蛋白质移位的纳米孔传感器 - Google Patents
用于酶介导的蛋白质移位的纳米孔传感器 Download PDFInfo
- Publication number
- CN104619854B CN104619854B CN201380019821.3A CN201380019821A CN104619854B CN 104619854 B CN104619854 B CN 104619854B CN 201380019821 A CN201380019821 A CN 201380019821A CN 104619854 B CN104619854 B CN 104619854B
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- protein
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- translocase
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Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12M—APPARATUS FOR ENZYMOLOGY OR MICROBIOLOGY; APPARATUS FOR CULTURING MICROORGANISMS FOR PRODUCING BIOMASS, FOR GROWING CELLS OR FOR OBTAINING FERMENTATION OR METABOLIC PRODUCTS, i.e. BIOREACTORS OR FERMENTERS
- C12M47/00—Means for after-treatment of the produced biomass or of the fermentation or metabolic products, e.g. storage of biomass
- C12M47/06—Hydrolysis; Cell lysis; Extraction of intracellular or cell wall material
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/48—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54366—Apparatus specially adapted for solid-phase testing
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y15/00—Nanotechnology for interacting, sensing or actuating, e.g. quantum dots as markers in protein assays or molecular motors
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/483—Physical analysis of biological material
- G01N33/487—Physical analysis of biological material of liquid biological material
- G01N33/48707—Physical analysis of biological material of liquid biological material by electrical means
- G01N33/48721—Investigating individual macromolecules, e.g. by translocation through nanopores
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- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Immunology (AREA)
- Biotechnology (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Molecular Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- Biomedical Technology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- General Engineering & Computer Science (AREA)
- Cell Biology (AREA)
- Urology & Nephrology (AREA)
- Physics & Mathematics (AREA)
- Analytical Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Hematology (AREA)
- Sustainable Development (AREA)
- Biophysics (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Peptides Or Proteins (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
- Enzymes And Modification Thereof (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201261599754P | 2012-02-16 | 2012-02-16 | |
| US61/599,754 | 2012-02-16 | ||
| US201261713163P | 2012-10-12 | 2012-10-12 | |
| US61/713,163 | 2012-10-12 | ||
| PCT/US2013/026414 WO2013123379A2 (en) | 2012-02-16 | 2013-02-15 | Nanopore sensor for enzyme-mediated protein translocation |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CN104619854A CN104619854A (zh) | 2015-05-13 |
| CN104619854B true CN104619854B (zh) | 2018-07-17 |
Family
ID=48984893
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201380019821.3A Active CN104619854B (zh) | 2012-02-16 | 2013-02-15 | 用于酶介导的蛋白质移位的纳米孔传感器 |
Country Status (10)
| Country | Link |
|---|---|
| US (2) | US11339365B2 (enExample) |
| EP (1) | EP2814939B1 (enExample) |
| JP (2) | JP6312607B2 (enExample) |
| KR (1) | KR102066758B1 (enExample) |
| CN (1) | CN104619854B (enExample) |
| AU (1) | AU2013221356B2 (enExample) |
| BR (1) | BR112014020255B1 (enExample) |
| CA (1) | CA2864824C (enExample) |
| DK (1) | DK2814939T3 (enExample) |
| WO (1) | WO2013123379A2 (enExample) |
Families Citing this family (63)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB0724736D0 (en) | 2007-12-19 | 2008-01-30 | Oxford Nanolabs Ltd | Formation of layers of amphiphilic molecules |
| EP2694671B1 (en) | 2011-04-04 | 2021-01-06 | President and Fellows of Harvard College | Nanopore sensor comprising a device for measuring the local electrical potential |
| GB201202519D0 (en) | 2012-02-13 | 2012-03-28 | Oxford Nanopore Tech Ltd | Apparatus for supporting an array of layers of amphiphilic molecules and method of forming an array of layers of amphiphilic molecules |
| WO2013121224A1 (en) | 2012-02-16 | 2013-08-22 | Oxford Nanopore Technologies Limited | Analysis of measurements of a polymer |
| US9274430B2 (en) | 2012-10-10 | 2016-03-01 | Arizona Board Of Regents On Behalf Of Arizona State University | Systems and devices for molecule sensing and method of manufacturing thereof |
| GB201222928D0 (en) | 2012-12-19 | 2013-01-30 | Oxford Nanopore Tech Ltd | Analysis of a polynucleotide |
| EP3462167A1 (en) | 2013-03-05 | 2019-04-03 | Arizona Board of Regents on behalf of Arizona State University | Translocation of a polymer through a nanopore |
| GB201316849D0 (en) * | 2013-09-23 | 2013-11-06 | Isis Innovation | Method |
| WO2015127387A1 (en) * | 2014-02-21 | 2015-08-27 | Northeastern University | Fluorescence-based analysis of biopolymers using nanopores |
| US10336713B2 (en) | 2014-02-27 | 2019-07-02 | Arizona Board Of Regents, Acting For And On Behalf Of, Arizona State University | Triazole-based reader molecules and methods for synthesizing and use thereof |
| SG10201809900PA (en) * | 2014-07-31 | 2018-12-28 | Illumina Inc | Hybrid Nanopore Sensors |
| EP3971300B1 (en) | 2014-10-16 | 2024-06-05 | Oxford Nanopore Technologies plc | Sorting of polymers |
| US20160194698A1 (en) * | 2014-12-16 | 2016-07-07 | Arizona Board Of Regents On Behalf Of Arizona State University | Systems, apparatuses and methods for reading polymer sequence |
| US10794895B2 (en) | 2015-02-05 | 2020-10-06 | President And Fellows Of Harvard College | Nanopore sensor including fluidic passage |
| GB201508669D0 (en) | 2015-05-20 | 2015-07-01 | Oxford Nanopore Tech Ltd | Methods and apparatus for forming apertures in a solid state membrane using dielectric breakdown |
| US10126262B2 (en) * | 2015-09-24 | 2018-11-13 | Genia Technologies, Inc. | Differential output of analog memories storing nanopore measurement samples |
| GB201611770D0 (en) | 2016-07-06 | 2016-08-17 | Oxford Nanopore Tech | Microfluidic device |
| CN106443008A (zh) * | 2016-08-31 | 2017-02-22 | 中国科学院重庆绿色智能技术研究院 | 一种基于固态纳米孔的hiv‑1蛋白酶检测方法 |
| GB201619930D0 (en) * | 2016-11-24 | 2017-01-11 | Oxford Nanopore Tech | Apparatus and methods for controlling insertion of a membrane channel into a membrane |
| KR102885764B1 (ko) * | 2017-06-29 | 2025-11-13 | 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 | 나노포어를 통한 폴리머의 결정적 스텝핑 |
| EP3655423B1 (en) * | 2017-07-17 | 2023-12-20 | President and Fellows of Harvard College | Nanopore-matched protein shuttle for molecular characterization |
| EP4303317A3 (en) * | 2017-10-23 | 2024-04-24 | F. Hoffmann-La Roche AG | Removing and reinserting protein nanopores in a membrane using osmotic imbalance |
| GB2568895B (en) | 2017-11-29 | 2021-10-27 | Oxford Nanopore Tech Ltd | Microfluidic device |
| CN108226249B (zh) * | 2018-01-09 | 2021-02-26 | 深圳市梅丽纳米孔科技有限公司 | 一次性纳米孔生物传感器及其制作方法 |
| CN112534063A (zh) | 2018-05-22 | 2021-03-19 | 安序源有限公司 | 用于核酸测序的方法、系统和组合物 |
| MY204234A (en) | 2018-08-27 | 2024-08-16 | Regeneron Pharma | Use of raman spectroscopy in downstream purification |
| CA3111488A1 (en) | 2018-09-11 | 2020-03-19 | Rijksuniversiteit Groningen | Biological nanopores having tunable pore diameters and uses thereof as analytical tools |
| CN113039210A (zh) * | 2018-09-19 | 2021-06-25 | 科纳根公司 | 在棒杆菌属宿主细胞中经由工程改造降解标签变体的可控蛋白降解 |
| US20210340192A1 (en) * | 2018-10-05 | 2021-11-04 | University Of Washington | Reporter constructs for nanopore-based detection of biological activity |
| JP2022511880A (ja) * | 2018-12-11 | 2022-02-01 | エフ.ホフマン-ラ ロシュ アーゲー | 膜における自己制限性プロテイン細孔挿入のためのシステム及び方法 |
| AU2020239385A1 (en) | 2019-03-12 | 2021-08-26 | Oxford Nanopore Technologies Plc | Nanopore sensing device and methods of operation and of forming it |
| NL2023062B1 (en) * | 2019-05-03 | 2020-11-30 | Univ Delft Tech | Protein current trace signal acquisition using a nanopore |
| GB201907243D0 (en) * | 2019-05-22 | 2019-07-03 | Oxford Nanopore Tech Ltd | Sensing interactions between molecular entities and nanapores |
| CN112147185B (zh) * | 2019-06-29 | 2022-07-01 | 清华大学 | 一种控制多肽穿过纳米孔速度的方法及其应用 |
| CN110554079B (zh) * | 2019-09-26 | 2024-10-22 | 中国科学院重庆绿色智能技术研究院 | 一种基于纳米通道的抗体单分子检测系统及方法 |
| GB201915480D0 (en) | 2019-10-25 | 2019-12-11 | Oxford Nanopore Tech Ltd | Improved nanopore sensing device, components and method of manufacture |
| EP4058549A4 (en) * | 2019-11-15 | 2023-12-27 | Machine Bio Inc. | METHODS AND SYSTEMS FOR GENERATION OF BIOLOGICAL MOLECULES |
| CA3161981A1 (en) * | 2019-11-19 | 2021-05-27 | Rijksuniversiteit Groningen | Artificial nanopores and uses and methods relating thereto |
| JP2023503514A (ja) * | 2019-12-02 | 2023-01-30 | オックスフォード ナノポール テクノロジーズ ピーエルシー | ナノポアを使用する標的ペプチドの特徴付けの方法 |
| NL2024579B1 (en) | 2019-12-24 | 2021-09-06 | Univ Delft Tech | Protein and peptide fingerprinting and sequencing by nanopore translocation of peptide-oligonucleotide complexes |
| WO2021208936A1 (zh) * | 2020-04-14 | 2021-10-21 | 成都今是科技有限公司 | 纳米孔制备和检测方法及其检测装置 |
| GB202016874D0 (en) | 2020-10-23 | 2020-12-09 | Oxford Nanopore Tech Ltd | Nanopore support structure and manufacture thereof |
| KR20230038566A (ko) | 2020-07-17 | 2023-03-20 | 옥스포드 나노포어 테크놀로지즈 피엘씨 | 나노포어 감지 디바이스 |
| US20230266268A1 (en) | 2020-07-22 | 2023-08-24 | Oxford Nanopore Technologies Inc. | Solid state nanopore formation |
| US11994508B2 (en) * | 2020-12-23 | 2024-05-28 | Northeastern University | Method and system for linearization and translocation of single protein molecules through nanopores |
| US11994484B2 (en) * | 2021-03-25 | 2024-05-28 | The Regents Of The University Of California | Apparatus and method for single cell discrimination |
| GB202112235D0 (en) | 2021-08-26 | 2021-10-13 | Oxford Nanopore Tech Ltd | Nanopore |
| CN118318049A (zh) | 2021-09-28 | 2024-07-09 | 安序源有限公司 | 用于处理核酸样品的方法以及核酸样品的组合物 |
| GB202118908D0 (en) | 2021-12-23 | 2022-02-09 | Oxford Nanopore Tech Ltd | Method |
| AU2023320396A1 (en) * | 2022-08-02 | 2025-02-20 | Glyphic Biotechnologies, Inc. | Protein sequencing via coupling of polymerizable molecules |
| IL320502A (en) | 2022-10-28 | 2025-06-01 | Univ Groningen | Nanopore-based protein efflux |
| GB202216162D0 (en) | 2022-10-31 | 2022-12-14 | Oxford Nanopore Tech Plc | Method |
| GB202216905D0 (en) | 2022-11-11 | 2022-12-28 | Oxford Nanopore Tech Plc | Novel pore monomers and pores |
| CN120265979A (zh) * | 2022-12-29 | 2025-07-04 | 深圳华大生命科学研究院 | 生物纳米孔传感器、其制备方法及应用 |
| WO2024165853A1 (en) | 2023-02-07 | 2024-08-15 | Oxford University Innovation Limited | Method of characterising a peptide, polypeptide or protein using a nanopore |
| WO2024222911A1 (zh) * | 2023-04-28 | 2024-10-31 | 清华大学 | 一种被修饰的多肽、多肽复合物、多肽混合物及控制多肽移位速度或表征多肽的系统和方法 |
| WO2024249122A1 (en) * | 2023-06-01 | 2024-12-05 | University Of Washington | Method and kit for rereading single protein molecules using a nanopore and an unfoldase |
| GB202313202D0 (en) * | 2023-08-30 | 2023-10-11 | Portal Biotech Ltd | Systems and methods for nanopore-based analyte detection |
| CN119667132A (zh) * | 2023-09-20 | 2025-03-21 | 西安电子科技大学 | 一种半合成纳米孔及其制备方法和蛋白质测序方法 |
| GB202317028D0 (en) | 2023-11-06 | 2023-12-20 | Oxford Nanopore Tech Ltd | Method |
| WO2025120010A1 (en) * | 2023-12-04 | 2025-06-12 | Adolphe Merkle Institute, University Of Fribourg | Ply nanopores |
| WO2025120150A1 (en) | 2023-12-08 | 2025-06-12 | Oxford Nanopore Technologies Plc | Methods and apparatus for forming apertures, methods and apparatus for unblocking apertures, methods of sensing molecular entities in apertures, and measurement systems |
| CN119470870B (zh) * | 2024-11-19 | 2025-10-17 | 广东工业大学 | 一种基于组合式纳米孔结构的蛋白质检测方法 |
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| CN1860370A (zh) * | 2003-10-29 | 2006-11-08 | 英特尔公司 | 表征分析物的方法和设备 |
| US20080287656A1 (en) * | 2005-03-24 | 2008-11-20 | Westfaelische Wilhelms-Universitat Muenster | Device and Method For Cell Free Analytical and Preparative Protein Synthesis |
| WO2010141468A1 (en) * | 2009-06-01 | 2010-12-09 | Way Jeffrey C | Methods and molecules for yield improvement involving metabolic engineering |
| US20110311965A1 (en) * | 2008-11-14 | 2011-12-22 | Isis Innovation Limited | Methods of enhancing translocation of charged analytes through transmembrane protein pores |
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| US5795782A (en) | 1995-03-17 | 1998-08-18 | President & Fellows Of Harvard College | Characterization of individual polymer molecules based on monomer-interface interactions |
| US6362002B1 (en) | 1995-03-17 | 2002-03-26 | President And Fellows Of Harvard College | Characterization of individual polymer molecules based on monomer-interface interactions |
| SE513280C2 (sv) | 1998-11-05 | 2000-08-14 | Forbo Int Sa | Beläggningsmaterial för golv och förfarande för dess framställning |
| US6267872B1 (en) | 1998-11-06 | 2001-07-31 | The Regents Of The University Of California | Miniature support for thin films containing single channels or nanopores and methods for using same |
| WO2000078668A1 (en) | 1999-06-22 | 2000-12-28 | President And Fellows Of Harvard College | Control of solid state dimensional features |
| US6464842B1 (en) | 1999-06-22 | 2002-10-15 | President And Fellows Of Harvard College | Control of solid state dimensional features |
| CA2384100C (en) | 1999-09-07 | 2011-03-29 | The Regents Of The University Of California | Methods of determining the presence of double stranded nucleic acids in a sample |
| AU2002239284A1 (en) | 2000-11-27 | 2002-06-03 | The Regents Of The University Of California | Methods and devices for characterizing duplex nucleic acid molecules |
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| US7846738B2 (en) * | 2003-08-15 | 2010-12-07 | President And Fellows Of Harvard College | Study of polymer molecules and conformations with a nanopore |
| WO2006028508A2 (en) | 2004-03-23 | 2006-03-16 | President And Fellows Of Harvard College | Methods and apparatus for characterizing polynucleotides |
| WO2005124888A1 (en) | 2004-06-08 | 2005-12-29 | President And Fellows Of Harvard College | Suspended carbon nanotube field effect transistor |
| US20110005918A1 (en) | 2007-04-04 | 2011-01-13 | Akeson Mark A | Compositions, devices, systems, and methods for using a nanopore |
| GB0724736D0 (en) | 2007-12-19 | 2008-01-30 | Oxford Nanolabs Ltd | Formation of layers of amphiphilic molecules |
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-
2013
- 2013-02-15 WO PCT/US2013/026414 patent/WO2013123379A2/en not_active Ceased
- 2013-02-15 CA CA2864824A patent/CA2864824C/en active Active
- 2013-02-15 AU AU2013221356A patent/AU2013221356B2/en active Active
- 2013-02-15 JP JP2014557827A patent/JP6312607B2/ja active Active
- 2013-02-15 KR KR1020147025764A patent/KR102066758B1/ko active Active
- 2013-02-15 DK DK13749423.3T patent/DK2814939T3/en active
- 2013-02-15 CN CN201380019821.3A patent/CN104619854B/zh active Active
- 2013-02-15 EP EP13749423.3A patent/EP2814939B1/en active Active
- 2013-02-15 BR BR112014020255-9A patent/BR112014020255B1/pt active IP Right Grant
- 2013-02-15 US US14/378,448 patent/US11339365B2/en active Active
-
2017
- 2017-12-08 JP JP2017236383A patent/JP6594944B2/ja active Active
-
2022
- 2022-05-16 US US17/745,399 patent/US20220396758A1/en active Pending
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| CN1860370A (zh) * | 2003-10-29 | 2006-11-08 | 英特尔公司 | 表征分析物的方法和设备 |
| US20080287656A1 (en) * | 2005-03-24 | 2008-11-20 | Westfaelische Wilhelms-Universitat Muenster | Device and Method For Cell Free Analytical and Preparative Protein Synthesis |
| US20110311965A1 (en) * | 2008-11-14 | 2011-12-22 | Isis Innovation Limited | Methods of enhancing translocation of charged analytes through transmembrane protein pores |
| WO2010141468A1 (en) * | 2009-06-01 | 2010-12-09 | Way Jeffrey C | Methods and molecules for yield improvement involving metabolic engineering |
Also Published As
| Publication number | Publication date |
|---|---|
| AU2013221356A1 (en) | 2014-08-28 |
| AU2013221356B2 (en) | 2018-10-18 |
| CN104619854A (zh) | 2015-05-13 |
| US20220396758A1 (en) | 2022-12-15 |
| US11339365B2 (en) | 2022-05-24 |
| WO2013123379A3 (en) | 2015-03-12 |
| CA2864824C (en) | 2020-06-16 |
| EP2814939A4 (en) | 2016-02-24 |
| CA2864824A1 (en) | 2013-08-22 |
| EP2814939B1 (en) | 2018-04-18 |
| BR112014020255B1 (pt) | 2022-01-25 |
| KR20140131539A (ko) | 2014-11-13 |
| WO2013123379A2 (en) | 2013-08-22 |
| BR112014020255A2 (enExample) | 2017-06-20 |
| JP6594944B2 (ja) | 2019-10-23 |
| KR102066758B1 (ko) | 2020-02-11 |
| JP2015517799A (ja) | 2015-06-25 |
| JP2018075021A (ja) | 2018-05-17 |
| DK2814939T3 (en) | 2018-07-30 |
| US20160032236A1 (en) | 2016-02-04 |
| BR112014020255A8 (pt) | 2017-07-11 |
| JP6312607B2 (ja) | 2018-04-18 |
| EP2814939A2 (en) | 2014-12-24 |
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