CN101918831B - 以dna微阵列为基础的平衡易位断点的鉴定和定位 - Google Patents

以dna微阵列为基础的平衡易位断点的鉴定和定位 Download PDF

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CN101918831B
CN101918831B CN200880124084.2A CN200880124084A CN101918831B CN 101918831 B CN101918831 B CN 101918831B CN 200880124084 A CN200880124084 A CN 200880124084A CN 101918831 B CN101918831 B CN 101918831B
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dna
amplification
methods
microarray
hybridization
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CN101918831A (zh
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H·A·格赖斯曼
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University of Washington
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University of Washington
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/118—Prognosis of disease development

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
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  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
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  • Microbiology (AREA)
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  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
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  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
CN200880124084.2A 2007-11-08 2008-11-10 以dna微阵列为基础的平衡易位断点的鉴定和定位 Expired - Fee Related CN101918831B (zh)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US98657607P 2007-11-08 2007-11-08
US60/986,576 2007-11-08
PCT/US2008/083014 WO2009062166A2 (en) 2007-11-08 2008-11-10 Dna microarray based identification and mapping of balanced translocation breakpoints

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CN101918831A CN101918831A (zh) 2010-12-15
CN101918831B true CN101918831B (zh) 2014-10-15

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US (1) US20110021371A1 (enExample)
EP (1) EP2217921A4 (enExample)
JP (1) JP5421278B2 (enExample)
KR (1) KR20100097139A (enExample)
CN (1) CN101918831B (enExample)
AU (1) AU2008323649A1 (enExample)
BR (1) BRPI0820272A2 (enExample)
CA (1) CA2704625A1 (enExample)
MX (1) MX2010005060A (enExample)
WO (1) WO2009062166A2 (enExample)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TWI873135B (zh) * 2019-05-08 2025-02-21 英商牛津生物力學公眾有限公司 Dna標記

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2147981A1 (en) * 2008-07-25 2010-01-27 Biotype AG Kit and method for evaluating detection properties in amplification reactions
ITMI20091007A1 (it) 2009-06-09 2010-12-10 Giovanni Porta Metodo di monitoraggio e trattamento
AU2010298000A1 (en) 2009-09-25 2012-04-05 Signature Genomics Laboratories Llc Multiplex (+/-) stranded arrays and assays for detecting chromosomal abnormalities associated with cancer and other diseases
WO2012159069A1 (en) * 2011-05-19 2012-11-22 University Of Utah Research Foundation Methods and compostions for the detection of balanced reciprocal translocations/rearrangements
WO2013033169A1 (en) * 2011-08-31 2013-03-07 Sanofi Methods of identifying genomic translocations associated with cancer
FR3010530B1 (fr) * 2013-09-11 2015-10-09 Univ Rouen Methode de diagnostic des hemopathies malignes et kit associe
CN103704205B (zh) * 2014-01-15 2015-09-23 山东大学 一种含微量稀土的牛精液冷冻稀释液及其应用
US10443090B2 (en) 2014-11-25 2019-10-15 Electronics And Telecommunications Research Institute Method and apparatus for detecting translocation
BR112017025577A2 (pt) * 2015-05-29 2018-08-07 Altergon Sa métodos, suportes e kits para análise de cgh reforçada
CN105044168A (zh) * 2015-06-03 2015-11-11 福建医科大学 基于氟代核酸探针的双通道传感器检测急早幼粒PML/RARα基因序列的方法
CN112669902B (zh) * 2021-03-16 2021-06-04 北京贝瑞和康生物技术有限公司 检测基因组结构变异的方法、计算设备和存储介质

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030124539A1 (en) * 2001-12-21 2003-07-03 Affymetrix, Inc. A Corporation Organized Under The Laws Of The State Of Delaware High throughput resequencing and variation detection using high density microarrays
US20040097711A1 (en) * 2002-03-12 2004-05-20 Henry Yue Immunoglobulin superfamily proteins
CN1798974A (zh) * 2003-04-02 2006-07-05 阿德莱德研究及创新控股有限公司 基因组比较杂交
US20070238105A1 (en) * 2006-04-07 2007-10-11 Agilent Technologies, Inc. High resolution chromosomal mapping

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5830645A (en) * 1994-12-09 1998-11-03 The Regents Of The University Of California Comparative fluorescence hybridization to nucleic acid arrays
US6251601B1 (en) * 1999-02-02 2001-06-26 Vysis, Inc. Simultaneous measurement of gene expression and genomic abnormalities using nucleic acid microarrays
WO2002093130A2 (en) * 2001-05-14 2002-11-21 Cancer Genetics, Inc. Methods of analyzing chromosomal translocations using fluorescence in situ hybridization (fish)
US20050159378A1 (en) * 2001-05-18 2005-07-21 Sirna Therapeutics, Inc. RNA interference mediated inhibition of Myc and/or Myb gene expression using short interfering nucleic acid (siNA)
US7198897B2 (en) * 2001-12-19 2007-04-03 Brandeis University Late-PCR
US20050112689A1 (en) * 2003-04-04 2005-05-26 Robert Kincaid Systems and methods for statistically analyzing apparent CGH data anomalies and plotting same
DE102005028381A1 (de) * 2005-06-20 2006-12-28 Wella Ag Produktabgabesystem zum Versprühen haarkerantinreduzierende oder oxidierende Wirkstoffe enthaltender Zusammensetzungen
DE102005031734A1 (de) * 2005-07-07 2007-01-18 GM Global Technology Operations, Inc., Detroit Verfahren zur Berechnung des Unterdruckes im Bremskraftverstärker eines Fahrzeugs mit Otto-Motor
GB0516797D0 (en) * 2005-08-16 2005-09-21 Oxford Gene Tech Ip Ltd CGH method
US8076074B2 (en) * 2005-11-29 2011-12-13 Quest Diagnostics Investments Incorporated Balanced translocation in comparative hybridization

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030124539A1 (en) * 2001-12-21 2003-07-03 Affymetrix, Inc. A Corporation Organized Under The Laws Of The State Of Delaware High throughput resequencing and variation detection using high density microarrays
US20040097711A1 (en) * 2002-03-12 2004-05-20 Henry Yue Immunoglobulin superfamily proteins
CN1798974A (zh) * 2003-04-02 2006-07-05 阿德莱德研究及创新控股有限公司 基因组比较杂交
US20070238105A1 (en) * 2006-04-07 2007-10-11 Agilent Technologies, Inc. High resolution chromosomal mapping

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
Jian-Yong Li等.Detection of translocation t (11;14)(q13;q32) in mantle cell lymphoma by fluorescence in situ hybridization.《American Journal of Pathology》.1999,第154卷(第5期), *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TWI873135B (zh) * 2019-05-08 2025-02-21 英商牛津生物力學公眾有限公司 Dna標記

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WO2009062166A3 (en) 2009-12-30
CA2704625A1 (en) 2009-05-14
KR20100097139A (ko) 2010-09-02
BRPI0820272A2 (pt) 2015-05-26
WO2009062166A2 (en) 2009-05-14
EP2217921A4 (en) 2011-07-06
JP2011505122A (ja) 2011-02-24
AU2008323649A1 (en) 2009-05-14
MX2010005060A (es) 2010-07-05
EP2217921A2 (en) 2010-08-18
CN101918831A (zh) 2010-12-15
US20110021371A1 (en) 2011-01-27
JP5421278B2 (ja) 2014-02-19

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