CA2953367A1 - Library preparation of tagged nucleic acid using single tube add-on protocol - Google Patents
Library preparation of tagged nucleic acid using single tube add-on protocol Download PDFInfo
- Publication number
- CA2953367A1 CA2953367A1 CA2953367A CA2953367A CA2953367A1 CA 2953367 A1 CA2953367 A1 CA 2953367A1 CA 2953367 A CA2953367 A CA 2953367A CA 2953367 A CA2953367 A CA 2953367A CA 2953367 A1 CA2953367 A1 CA 2953367A1
- Authority
- CA
- Canada
- Prior art keywords
- nucleic acid
- tagged
- target nucleic
- kit
- sequencing
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1065—Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1003—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- General Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Analytical Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Bioinformatics & Computational Biology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Immunology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Enzymes And Modification Thereof (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
- Saccharide Compounds (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201462017786P | 2014-06-26 | 2014-06-26 | |
| US62/017,786 | 2014-06-26 | ||
| US201462027198P | 2014-07-21 | 2014-07-21 | |
| US62/027,198 | 2014-07-21 | ||
| PCT/US2015/037653 WO2015200609A1 (en) | 2014-06-26 | 2015-06-25 | Library preparation of tagged nucleic acid using single tube add-on protocol |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA2953367A1 true CA2953367A1 (en) | 2015-12-30 |
Family
ID=53761498
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA2953367A Pending CA2953367A1 (en) | 2014-06-26 | 2015-06-25 | Library preparation of tagged nucleic acid using single tube add-on protocol |
Country Status (9)
| Country | Link |
|---|---|
| US (3) | US10017759B2 (enExample) |
| EP (2) | EP3161137B1 (enExample) |
| JP (1) | JP6626848B2 (enExample) |
| CN (2) | CN112210834B (enExample) |
| AU (1) | AU2015279862B2 (enExample) |
| CA (1) | CA2953367A1 (enExample) |
| DK (1) | DK3161137T3 (enExample) |
| ES (2) | ES3031891T3 (enExample) |
| WO (1) | WO2015200609A1 (enExample) |
Families Citing this family (121)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2010209528B2 (en) | 2009-01-30 | 2015-10-01 | Oxford Nanopore Technologies Limited | Adaptors for nucleic acid constructs in transmembrane sequencing |
| EP3907297A1 (en) | 2011-04-15 | 2021-11-10 | The Johns Hopkins University | Safe sequencing system |
| JP6298404B2 (ja) | 2011-07-25 | 2018-03-20 | オックスフォード ナノポール テクノロジーズ リミテッド | 膜貫通ポアを用いる二重鎖ポリヌクレオチド配列決定のためのヘアピンループ方法 |
| DK2814959T3 (en) | 2012-02-17 | 2018-04-23 | Hutchinson Fred Cancer Res | COMPOSITIONS AND PROCEDURES FOR EXACTLY IDENTIFYING MUTATIONS |
| EP2875154B1 (en) | 2012-07-19 | 2017-08-23 | Oxford Nanopore Technologies Limited | SSB method for characterising a nucleic acid |
| US10221442B2 (en) | 2012-08-14 | 2019-03-05 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| EP2885418A4 (en) | 2012-08-14 | 2016-03-02 | 10X Genomics Inc | MICROCAPSE COMPOSITIONS AND METHOD THEREFOR |
| US11591637B2 (en) | 2012-08-14 | 2023-02-28 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| US10273541B2 (en) | 2012-08-14 | 2019-04-30 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10752949B2 (en) | 2012-08-14 | 2020-08-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US9701998B2 (en) | 2012-12-14 | 2017-07-11 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10323279B2 (en) | 2012-08-14 | 2019-06-18 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10584381B2 (en) | 2012-08-14 | 2020-03-10 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US9951386B2 (en) | 2014-06-26 | 2018-04-24 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US11525163B2 (en) | 2012-10-29 | 2022-12-13 | The Johns Hopkins University | Papanicolaou test for ovarian and endometrial cancers |
| WO2014093676A1 (en) | 2012-12-14 | 2014-06-19 | 10X Technologies, Inc. | Methods and systems for processing polynucleotides |
| US10533221B2 (en) | 2012-12-14 | 2020-01-14 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| CN108753766A (zh) | 2013-02-08 | 2018-11-06 | 10X基因组学有限公司 | 多核苷酸条形码生成 |
| GB201314695D0 (en) | 2013-08-16 | 2013-10-02 | Oxford Nanopore Tech Ltd | Method |
| CA2901545C (en) | 2013-03-08 | 2019-10-08 | Oxford Nanopore Technologies Limited | Use of spacer elements in a nucleic acid to control movement of a helicase |
| US9328382B2 (en) | 2013-03-15 | 2016-05-03 | Complete Genomics, Inc. | Multiple tagging of individual long DNA fragments |
| CN111394426B (zh) | 2013-05-23 | 2024-05-10 | 斯坦福大学托管董事会 | 用于个人表观基因组学的至天然染色质的转座 |
| US10395758B2 (en) | 2013-08-30 | 2019-08-27 | 10X Genomics, Inc. | Sequencing methods |
| US9824068B2 (en) | 2013-12-16 | 2017-11-21 | 10X Genomics, Inc. | Methods and apparatus for sorting data |
| GB201403096D0 (en) | 2014-02-21 | 2014-04-09 | Oxford Nanopore Tech Ltd | Sample preparation method |
| KR102596508B1 (ko) | 2014-04-10 | 2023-10-30 | 10엑스 제노믹스, 인크. | 시약을 캡슐화 및 구획화하기 위한 유체 디바이스, 시스템, 및 방법, 및 이의 응용 |
| US20150353989A1 (en) | 2014-06-09 | 2015-12-10 | Illumina Cambridge Limited | Sample preparation for nucleic acid amplification |
| US10017759B2 (en) | 2014-06-26 | 2018-07-10 | Illumina, Inc. | Library preparation of tagged nucleic acid |
| EP4574974A3 (en) | 2014-06-26 | 2025-10-08 | 10x Genomics, Inc. | Methods of analyzing nucleic acids from individual cells or cell populations |
| US12312640B2 (en) | 2014-06-26 | 2025-05-27 | 10X Genomics, Inc. | Analysis of nucleic acid sequences |
| CA2953469A1 (en) | 2014-06-26 | 2015-12-30 | 10X Genomics, Inc. | Analysis of nucleic acid sequences |
| GB201418159D0 (en) | 2014-10-14 | 2014-11-26 | Oxford Nanopore Tech Ltd | Method |
| KR20170073667A (ko) | 2014-10-29 | 2017-06-28 | 10엑스 제노믹스, 인크. | 표적화 핵산 서열 분석을 위한 방법 및 조성물 |
| US9975122B2 (en) | 2014-11-05 | 2018-05-22 | 10X Genomics, Inc. | Instrument systems for integrated sample processing |
| US10900065B2 (en) | 2014-11-14 | 2021-01-26 | University Of Washington | Methods and kits for labeling cellular molecules |
| US10221436B2 (en) | 2015-01-12 | 2019-03-05 | 10X Genomics, Inc. | Processes and systems for preparation of nucleic acid sequencing libraries and libraries prepared using same |
| EP4273262A3 (en) | 2015-02-04 | 2023-12-27 | The University of British Columbia | Methods and devices for analyzing particles |
| MX2017010857A (es) | 2015-02-24 | 2017-12-11 | 10X Genomics Inc | Metodos para la cobertura de secuencia de acidos nucleicos seleccionados como diana. |
| WO2016137973A1 (en) | 2015-02-24 | 2016-09-01 | 10X Genomics Inc | Partition processing methods and systems |
| US11286531B2 (en) | 2015-08-11 | 2022-03-29 | The Johns Hopkins University | Assaying ovarian cyst fluid |
| CN108350485A (zh) * | 2015-10-30 | 2018-07-31 | 精密科学发展有限责任公司 | 血浆dna的多重扩增检测测定以及分离和检测 |
| US11371094B2 (en) | 2015-11-19 | 2022-06-28 | 10X Genomics, Inc. | Systems and methods for nucleic acid processing using degenerate nucleotides |
| SG10202108763UA (en) | 2015-12-04 | 2021-09-29 | 10X Genomics Inc | Methods and compositions for nucleic acid analysis |
| WO2017138984A1 (en) | 2016-02-11 | 2017-08-17 | 10X Genomics, Inc. | Systems, methods, and media for de novo assembly of whole genome sequence data |
| WO2017197343A2 (en) | 2016-05-12 | 2017-11-16 | 10X Genomics, Inc. | Microfluidic on-chip filters |
| WO2017197338A1 (en) | 2016-05-13 | 2017-11-16 | 10X Genomics, Inc. | Microfluidic systems and methods of use |
| GB201609220D0 (en) | 2016-05-25 | 2016-07-06 | Oxford Nanopore Tech Ltd | Method |
| RU2736351C2 (ru) * | 2016-08-31 | 2020-11-16 | Президент Энд Фэллоуз Оф Харвард Коллидж | Способы дискретной амплификации полного генома |
| JP7280181B2 (ja) * | 2016-10-01 | 2023-05-23 | バークレー ライツ，インコーポレイテッド | Ｄｎａバーコード組成物及びマイクロ流体デバイスによるインサイチュ同定法 |
| IL266197B2 (en) | 2016-10-24 | 2024-03-01 | Geneinfosec Inc | Hiding information contained within nucleic acids |
| US10550429B2 (en) | 2016-12-22 | 2020-02-04 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10011872B1 (en) | 2016-12-22 | 2018-07-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10815525B2 (en) | 2016-12-22 | 2020-10-27 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| EP3559255A1 (en) | 2016-12-23 | 2019-10-30 | Grail, Inc. | Methods for high efficiency library preparation using double-stranded adapters |
| KR20250005529A (ko) * | 2016-12-29 | 2025-01-09 | 일루미나, 인코포레이티드 | 세포 구획 내의 생체분자에 대한 직교 접근 및 그의 태그부착을 위한 분석 시스템 |
| CN106801044B (zh) * | 2017-01-09 | 2021-03-23 | 北京全式金生物技术有限公司 | 一种环状转座子复合物及其应用 |
| EP4628582A2 (en) | 2017-01-30 | 2025-10-08 | 10x Genomics, Inc. | Methods and systems for droplet-based single cell barcoding |
| US12264411B2 (en) | 2017-01-30 | 2025-04-01 | 10X Genomics, Inc. | Methods and systems for analysis |
| US10995333B2 (en) | 2017-02-06 | 2021-05-04 | 10X Genomics, Inc. | Systems and methods for nucleic acid preparation |
| US11274344B2 (en) | 2017-03-30 | 2022-03-15 | Grail, Inc. | Enhanced ligation in sequencing library preparation |
| WO2018183942A1 (en) | 2017-03-31 | 2018-10-04 | Grail, Inc. | Improved library preparation and use thereof for sequencing-based error correction and/or variant identification |
| WO2018183897A1 (en) | 2017-03-31 | 2018-10-04 | Grail, Inc. | Higher target capture efficiency using probe extension |
| EP3445876B1 (en) | 2017-05-26 | 2023-07-05 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
| US10844372B2 (en) | 2017-05-26 | 2020-11-24 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
| SG11202001010UA (en) | 2017-08-07 | 2020-03-30 | Univ Johns Hopkins | Methods and materials for assessing and treating cancer |
| US10837047B2 (en) | 2017-10-04 | 2020-11-17 | 10X Genomics, Inc. | Compositions, methods, and systems for bead formation using improved polymers |
| WO2019084043A1 (en) | 2017-10-26 | 2019-05-02 | 10X Genomics, Inc. | METHODS AND SYSTEMS FOR NUCLEIC ACID PREPARATION AND CHROMATIN ANALYSIS |
| EP4241882B1 (en) | 2017-10-27 | 2025-04-30 | 10X Genomics, Inc. | Methods for sample preparation and analysis |
| CN111051523B (zh) | 2017-11-15 | 2024-03-19 | 10X基因组学有限公司 | 功能化凝胶珠 |
| US10829815B2 (en) | 2017-11-17 | 2020-11-10 | 10X Genomics, Inc. | Methods and systems for associating physical and genetic properties of biological particles |
| WO2019108851A1 (en) | 2017-11-30 | 2019-06-06 | 10X Genomics, Inc. | Systems and methods for nucleic acid preparation and analysis |
| EP3724658A1 (en) | 2017-12-12 | 2020-10-21 | 10X Genomics, Inc. | Systems and methods for single cell processing |
| EP3728631A1 (en) | 2017-12-22 | 2020-10-28 | 10X Genomics, Inc. | Systems and methods for processing nucleic acid molecules from one or more cells |
| EP3733865B1 (en) * | 2017-12-28 | 2025-10-15 | MGI Tech Co., Ltd. | Method for obtaining single-cell mrna sequence |
| US12377396B2 (en) | 2018-02-05 | 2025-08-05 | The Board Of Trustees Of The Leland Stanford Junior University | Systems and methods for multiplexed measurements in single and ensemble cells |
| WO2019157529A1 (en) | 2018-02-12 | 2019-08-15 | 10X Genomics, Inc. | Methods characterizing multiple analytes from individual cells or cell populations |
| US11639928B2 (en) | 2018-02-22 | 2023-05-02 | 10X Genomics, Inc. | Methods and systems for characterizing analytes from individual cells or cell populations |
| WO2019169028A1 (en) | 2018-02-28 | 2019-09-06 | 10X Genomics, Inc. | Transcriptome sequencing through random ligation |
| EP3775271B1 (en) | 2018-04-06 | 2025-03-12 | 10X Genomics, Inc. | Systems and methods for quality control in single cell processing |
| WO2019217758A1 (en) | 2018-05-10 | 2019-11-14 | 10X Genomics, Inc. | Methods and systems for molecular library generation |
| GB201807793D0 (en) | 2018-05-14 | 2018-06-27 | Oxford Nanopore Tech Ltd | Method |
| IL272234B2 (en) * | 2018-06-04 | 2025-10-01 | Illumina Inc | High-throughput single-cell transcriptome libraries and methods for their production and use |
| US11932899B2 (en) | 2018-06-07 | 2024-03-19 | 10X Genomics, Inc. | Methods and systems for characterizing nucleic acid molecules |
| US11703427B2 (en) | 2018-06-25 | 2023-07-18 | 10X Genomics, Inc. | Methods and systems for cell and bead processing |
| EP3821011B1 (en) * | 2018-07-11 | 2023-04-26 | Cygnus Biosciences (Beijing) Co., Ltd. | Transposome enabled dna/rna-sequencing (ted rna-seq) |
| US12188014B1 (en) | 2018-07-25 | 2025-01-07 | 10X Genomics, Inc. | Compositions and methods for nucleic acid processing using blocking agents |
| US20200032335A1 (en) | 2018-07-27 | 2020-01-30 | 10X Genomics, Inc. | Systems and methods for metabolome analysis |
| US12163179B2 (en) | 2018-08-03 | 2024-12-10 | 10X Gemomics, Inc. | Methods and systems to minimize barcode exchange |
| US12065688B2 (en) | 2018-08-20 | 2024-08-20 | 10X Genomics, Inc. | Compositions and methods for cellular processing |
| WO2020041148A1 (en) | 2018-08-20 | 2020-02-27 | 10X Genomics, Inc. | Methods and systems for detection of protein-dna interactions using proximity ligation |
| CN109295048A (zh) * | 2018-10-09 | 2019-02-01 | 中国农业科学院深圳农业基因组研究所 | 一种全基因组分子标记检测的方法 |
| US11459607B1 (en) | 2018-12-10 | 2022-10-04 | 10X Genomics, Inc. | Systems and methods for processing-nucleic acid molecules from a single cell using sequential co-partitioning and composite barcodes |
| US12169198B2 (en) | 2019-01-08 | 2024-12-17 | 10X Genomics, Inc. | Systems and methods for sample analysis |
| US11845983B1 (en) | 2019-01-09 | 2023-12-19 | 10X Genomics, Inc. | Methods and systems for multiplexing of droplet based assays |
| CN113366115B (zh) * | 2019-01-29 | 2024-07-05 | 深圳华大智造科技股份有限公司 | 高覆盖率stlfr |
| US11584953B2 (en) | 2019-02-12 | 2023-02-21 | 10X Genomics, Inc. | Methods for processing nucleic acid molecules |
| US12305239B2 (en) | 2019-02-12 | 2025-05-20 | 10X Genomics, Inc. | Analysis of nucleic acid sequences |
| WO2020167862A1 (en) | 2019-02-12 | 2020-08-20 | 10X Genomics, Inc. | Systems and methods for transfer of reagents between droplets |
| US12275993B2 (en) | 2019-02-12 | 2025-04-15 | 10X Genomics, Inc. | Analysis of nucleic acid sequences |
| US11467153B2 (en) | 2019-02-12 | 2022-10-11 | 10X Genomics, Inc. | Methods for processing nucleic acid molecules |
| WO2020167866A1 (en) | 2019-02-12 | 2020-08-20 | 10X Genomics, Inc. | Systems and methods for transposon loading |
| US11851683B1 (en) | 2019-02-12 | 2023-12-26 | 10X Genomics, Inc. | Methods and systems for selective analysis of cellular samples |
| US11655499B1 (en) | 2019-02-25 | 2023-05-23 | 10X Genomics, Inc. | Detection of sequence elements in nucleic acid molecules |
| EP3938537A1 (en) | 2019-03-11 | 2022-01-19 | 10X Genomics, Inc. | Systems and methods for processing optically tagged beads |
| US12235262B1 (en) | 2019-09-09 | 2025-02-25 | 10X Genomics, Inc. | Methods and systems for single cell protein analysis |
| GB201914266D0 (en) * | 2019-10-03 | 2019-11-20 | Univ Oxford Innovation Ltd | Method of amplifying nucleic acids |
| MX2021011847A (es) * | 2019-12-19 | 2021-11-17 | Illumina Inc | Genotecas de celulas unicas de alto rendimiento y metodos para elaborarlas y usarlas. |
| US12449419B1 (en) | 2020-02-12 | 2025-10-21 | 10X Genomics, Inc. | Methods for detecting binding of peptide-MHC monomers to T cells |
| CA3170345A1 (en) | 2020-02-14 | 2021-08-19 | The Johns Hopkins University | Methods and materials for assessing nucleic acids |
| US11851700B1 (en) | 2020-05-13 | 2023-12-26 | 10X Genomics, Inc. | Methods, kits, and compositions for processing extracellular molecules |
| CN111575348B (zh) * | 2020-05-19 | 2024-01-09 | 广州微远医疗器械有限公司 | 宏基因组文库及建库方法和应用 |
| US12084715B1 (en) | 2020-11-05 | 2024-09-10 | 10X Genomics, Inc. | Methods and systems for reducing artifactual antisense products |
| US12480158B1 (en) | 2020-11-05 | 2025-11-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| EP4251760A1 (en) * | 2020-11-25 | 2023-10-04 | Alida Biosciences, Inc. | Multiplexed profiling of rna and dna modifications |
| CN114015755B (zh) * | 2020-12-31 | 2024-03-01 | 中国科学院北京基因组研究所(国家生物信息中心) | 用于标记核酸分子的方法和试剂盒 |
| US12398262B1 (en) | 2021-01-22 | 2025-08-26 | 10X Genomics, Inc. | Triblock copolymer-based cell stabilization and fixation system and methods of use thereof |
| EP4298244A1 (en) | 2021-02-23 | 2024-01-03 | 10X Genomics, Inc. | Probe-based analysis of nucleic acids and proteins |
| JPWO2023085232A1 (enExample) * | 2021-11-10 | 2023-05-19 | ||
| WO2023097295A1 (en) | 2021-11-24 | 2023-06-01 | Alida Biosciences, Inc. | Rna and dna analysis using engineered surfaces |
| CN116408160B (zh) * | 2021-12-31 | 2025-11-25 | 彩科(苏州)生物科技有限公司 | 具有稳定的隔离环境的微流体装置 |
| WO2025136701A1 (en) * | 2023-12-22 | 2025-06-26 | Illumina, Inc. | Passive encapsulated workflows |
Family Cites Families (72)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1991006678A1 (en) | 1989-10-26 | 1991-05-16 | Sri International | Dna sequencing |
| US6261808B1 (en) | 1992-08-04 | 2001-07-17 | Replicon, Inc. | Amplification of nucleic acid molecules via circular replicons |
| US5834202A (en) | 1992-08-04 | 1998-11-10 | Replicon, Inc. | Methods for the isothermal amplification of nucleic acid molecules |
| WO1994003624A1 (en) | 1992-08-04 | 1994-02-17 | Auerbach Jeffrey I | Methods for the isothermal amplification of nucleic acid molecules |
| US5614389A (en) | 1992-08-04 | 1997-03-25 | Replicon, Inc. | Methods for the isothermal amplification of nucleic acid molecules |
| US5386024A (en) | 1993-02-10 | 1995-01-31 | Gen-Probe Incorporated | Method to prepare nucleic acids from a biological sample using low pH and acid protease |
| US5422252A (en) | 1993-06-04 | 1995-06-06 | Becton, Dickinson And Company | Simultaneous amplification of multiple targets |
| CA2122203C (en) | 1993-05-11 | 2001-12-18 | Melinda S. Fraiser | Decontamination of nucleic acid amplification reactions |
| WO1995003430A1 (en) | 1993-07-23 | 1995-02-02 | Gen-Probe Incorporated | Methods for enhancing nucleic acid amplification |
| FR2708288B1 (fr) | 1993-07-26 | 1995-09-01 | Bio Merieux | Procédé d'amplification d'acides nucléiques par transcription utilisant le déplacement, réactifs et nécessaire pour la mise en Óoeuvre de ce procédé. |
| US5523204A (en) | 1993-12-10 | 1996-06-04 | Becton Dickinson And Company | Detection of nucleic acids in cells by strand displacement amplification |
| US5677170A (en) | 1994-03-02 | 1997-10-14 | The Johns Hopkins University | In vitro transposition of artificial transposons |
| KR100230718B1 (ko) | 1994-03-16 | 1999-11-15 | 다니엘 엘. 캐시앙, 헨리 엘. 노르호프 | 등온 가닥 변위 핵산 증폭법 |
| US5648211A (en) | 1994-04-18 | 1997-07-15 | Becton, Dickinson And Company | Strand displacement amplification using thermophilic enzymes |
| FR2726277B1 (fr) | 1994-10-28 | 1996-12-27 | Bio Merieux | Oligonucleotide utilisable comme amorce dans une methode d'amplification basee sur une replication avec deplacement de brin |
| US5650288A (en) * | 1995-07-14 | 1997-07-22 | Macfarlane; Gordon D. | Immunophilin-bound immunosuppressant assay |
| US5631147A (en) | 1995-09-21 | 1997-05-20 | Becton, Dickinson And Company | Detection of nucleic acids in cells by thermophilic strand displacement amplification |
| US5916779A (en) | 1995-09-21 | 1999-06-29 | Becton, Dickinson And Company | Strand displacement amplification of RNA targets |
| CA2249717A1 (en) | 1996-03-18 | 1997-09-25 | Richard K. Wilkosz | Target nucleic acid sequence amplification |
| US5773733A (en) | 1996-04-12 | 1998-06-30 | National Science Council | Alumina-aluminum nitride-nickel composites |
| GB9620209D0 (en) | 1996-09-27 | 1996-11-13 | Cemu Bioteknik Ab | Method of sequencing DNA |
| GB9626815D0 (en) | 1996-12-23 | 1997-02-12 | Cemu Bioteknik Ab | Method of sequencing DNA |
| EP1591541B1 (en) | 1997-04-01 | 2012-02-15 | Illumina Cambridge Limited | Method of nucleic acid sequencing |
| US6124120A (en) | 1997-10-08 | 2000-09-26 | Yale University | Multiple displacement amplification |
| AR021833A1 (es) | 1998-09-30 | 2002-08-07 | Applied Research Systems | Metodos de amplificacion y secuenciacion de acido nucleico |
| DE1020534T1 (de) | 1998-11-09 | 2001-03-01 | Eiken Kagaku K.K., Tokio/Tokyo | Verfahren zur synthetisieren von nukleinsäure |
| US6155972A (en) | 1999-02-02 | 2000-12-05 | Acorn Cardiovascular, Inc. | Cardiac constraint jacket construction |
| CA2365135C (en) | 1999-03-19 | 2009-08-18 | Takara Shuzo Co., Ltd. | Method for amplifying nucleic acid sequence |
| US6309833B1 (en) | 1999-04-12 | 2001-10-30 | Nanogen/Becton Dickinson Partnership | Multiplex amplification and separation of nucleic acid sequences on a bioelectronic microchip using asymmetric structures |
| US6326173B1 (en) | 1999-04-12 | 2001-12-04 | Nanogen/Becton Dickinson Partnership | Electronically mediated nucleic acid amplification in NASBA |
| US6238868B1 (en) | 1999-04-12 | 2001-05-29 | Nanogen/Becton Dickinson Partnership | Multiplex amplification and separation of nucleic acid sequences using ligation-dependant strand displacement amplification and bioelectronic chip technology |
| US20050191698A1 (en) | 1999-04-20 | 2005-09-01 | Illumina, Inc. | Nucleic acid sequencing using microsphere arrays |
| AU783873B2 (en) | 1999-09-13 | 2005-12-15 | Nugen Technologies, Inc. | Methods and compositions for linear isothermal amplification of polynucleotide sequences |
| US6274320B1 (en) | 1999-09-16 | 2001-08-14 | Curagen Corporation | Method of sequencing a nucleic acid |
| US7244559B2 (en) | 1999-09-16 | 2007-07-17 | 454 Life Sciences Corporation | Method of sequencing a nucleic acid |
| US7001792B2 (en) | 2000-04-24 | 2006-02-21 | Eagle Research & Development, Llc | Ultra-fast nucleic acid sequencing device and a method for making and using the same |
| EP1975251A3 (en) | 2000-07-07 | 2009-03-25 | Visigen Biotechnologies, Inc. | Real-time sequence determination |
| EP1312682A4 (en) | 2000-08-23 | 2005-03-09 | Takara Bio Inc | PROCESS FOR THE MAJOR PRODUCTION OF NUCLEIC ACIDS |
| US7211414B2 (en) | 2000-12-01 | 2007-05-01 | Visigen Biotechnologies, Inc. | Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity |
| US7057026B2 (en) | 2001-12-04 | 2006-06-06 | Solexa Limited | Labelled nucleotides |
| US20040038213A1 (en) * | 2002-08-06 | 2004-02-26 | Kwon Jai W. | Genotyping by in situ PCR amplification of a polynucleotide in a tissue biopsy |
| US7541444B2 (en) | 2002-08-23 | 2009-06-02 | Illumina Cambridge Limited | Modified nucleotides |
| US7595883B1 (en) | 2002-09-16 | 2009-09-29 | The Board Of Trustees Of The Leland Stanford Junior University | Biological analysis arrangement and approach therefor |
| JP4651386B2 (ja) | 2002-11-21 | 2011-03-16 | エピセンター テクノロジーズ | 二重鎖プロモーターの一本鎖をコードするプライマーの使用法 |
| US20050153333A1 (en) | 2003-12-02 | 2005-07-14 | Sooknanan Roy R. | Selective terminal tagging of nucleic acids |
| FR2865731B1 (fr) | 2004-01-30 | 2007-09-07 | Solvay | Procede de fabrication d'un hydrofluoroalcane |
| EP1790202A4 (en) | 2004-09-17 | 2013-02-20 | Pacific Biosciences California | APPARATUS AND METHOD FOR ANALYZING MOLECULES |
| US20060188892A1 (en) | 2005-02-18 | 2006-08-24 | Ambion, Inc. | Enzymatic digestion of tissue |
| US7405281B2 (en) | 2005-09-29 | 2008-07-29 | Pacific Biosciences Of California, Inc. | Fluorescent nucleotide analogs and uses therefor |
| EP4105644A3 (en) | 2006-03-31 | 2022-12-28 | Illumina, Inc. | Systems and devices for sequence by synthesis analysis |
| BRPI0715346A2 (pt) * | 2006-08-01 | 2013-11-26 | Applera Corp | Detecção de analitos e ácidos nucléicos |
| CA2666517A1 (en) | 2006-10-23 | 2008-05-02 | Pacific Biosciences Of California, Inc. | Polymerase enzymes and reagents for enhanced nucleic acid sequencing |
| US8262900B2 (en) | 2006-12-14 | 2012-09-11 | Life Technologies Corporation | Methods and apparatus for measuring analytes using large scale FET arrays |
| US8349167B2 (en) | 2006-12-14 | 2013-01-08 | Life Technologies Corporation | Methods and apparatus for detecting molecular interactions using FET arrays |
| JP5622392B2 (ja) | 2006-12-14 | 2014-11-12 | ライフ テクノロジーズ コーポレーション | 大規模ｆｅｔアレイを用いた分析物測定のための方法および装置 |
| US20100137143A1 (en) | 2008-10-22 | 2010-06-03 | Ion Torrent Systems Incorporated | Methods and apparatus for measuring analytes |
| US9080211B2 (en) * | 2008-10-24 | 2015-07-14 | Epicentre Technologies Corporation | Transposon end compositions and methods for modifying nucleic acids |
| HUE027961T2 (en) * | 2008-10-24 | 2016-11-28 | Epicentre Tech Corp | Transposon final preparations and methods for modifying nucleic acids |
| WO2011026194A1 (en) | 2009-09-07 | 2011-03-10 | Reproductive Health Science Pty Ltd | Nucleic acid extraction |
| EP2388312A1 (en) * | 2010-05-17 | 2011-11-23 | Curetis AG | Universally applicable lysis buffer and processing methods for the lysis of bodily samples |
| US20130123120A1 (en) * | 2010-05-18 | 2013-05-16 | Natera, Inc. | Highly Multiplex PCR Methods and Compositions |
| US9096899B2 (en) | 2010-10-27 | 2015-08-04 | Illumina, Inc. | Microdevices and biosensor cartridges for biological or chemical analysis and systems and methods for the same |
| AU2012212148B8 (en) * | 2011-02-02 | 2017-07-06 | University Of Washington Through Its Center For Commercialization | Massively parallel contiguity mapping |
| ES2746233T3 (es) * | 2011-05-24 | 2020-03-05 | Biontech Rna Pharmaceuticals Gmbh | Vacunas individualizadas para el cáncer |
| US10689643B2 (en) | 2011-11-22 | 2020-06-23 | Active Motif, Inc. | Targeted transposition for use in epigenetic studies |
| NO2694769T3 (enExample) * | 2012-03-06 | 2018-03-03 | ||
| US9683230B2 (en) | 2013-01-09 | 2017-06-20 | Illumina Cambridge Limited | Sample preparation on a solid support |
| CN108753766A (zh) * | 2013-02-08 | 2018-11-06 | 10X基因组学有限公司 | 多核苷酸条形码生成 |
| US20160208323A1 (en) | 2013-06-21 | 2016-07-21 | The Broad Institute, Inc. | Methods for Shearing and Tagging DNA for Chromatin Immunoprecipitation and Sequencing |
| US20150353989A1 (en) * | 2014-06-09 | 2015-12-10 | Illumina Cambridge Limited | Sample preparation for nucleic acid amplification |
| US10017759B2 (en) | 2014-06-26 | 2018-07-10 | Illumina, Inc. | Library preparation of tagged nucleic acid |
| EP4273262A3 (en) | 2015-02-04 | 2023-12-27 | The University of British Columbia | Methods and devices for analyzing particles |
-
2015
- 2015-06-24 US US14/749,562 patent/US10017759B2/en active Active
- 2015-06-25 CA CA2953367A patent/CA2953367A1/en active Pending
- 2015-06-25 DK DK15744405.0T patent/DK3161137T3/da active
- 2015-06-25 WO PCT/US2015/037653 patent/WO2015200609A1/en not_active Ceased
- 2015-06-25 CN CN202010451081.2A patent/CN112210834B/zh active Active
- 2015-06-25 ES ES20172685T patent/ES3031891T3/es active Active
- 2015-06-25 ES ES15744405T patent/ES2811518T3/es active Active
- 2015-06-25 EP EP15744405.0A patent/EP3161137B1/en active Active
- 2015-06-25 EP EP20172685.8A patent/EP3754020B1/en active Active
- 2015-06-25 AU AU2015279862A patent/AU2015279862B2/en active Active
- 2015-06-25 CN CN201580046283.6A patent/CN106795651B/zh active Active
- 2015-06-25 JP JP2016574392A patent/JP6626848B2/ja active Active
-
2018
- 2018-06-28 US US16/021,886 patent/US11085041B2/en active Active
-
2021
- 2021-07-13 US US17/373,929 patent/US12454688B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| US12454688B2 (en) | 2025-10-28 |
| AU2015279862B2 (en) | 2021-07-15 |
| WO2015200609A9 (en) | 2016-10-13 |
| US11085041B2 (en) | 2021-08-10 |
| WO2015200609A1 (en) | 2015-12-30 |
| EP3754020B1 (en) | 2025-04-09 |
| CN106795651B (zh) | 2020-05-22 |
| CN106795651A (zh) | 2017-05-31 |
| JP2017519774A (ja) | 2017-07-20 |
| US20180355349A1 (en) | 2018-12-13 |
| EP3754020C0 (en) | 2025-04-09 |
| US10017759B2 (en) | 2018-07-10 |
| US20150376608A1 (en) | 2015-12-31 |
| JP6626848B2 (ja) | 2019-12-25 |
| DK3161137T3 (da) | 2020-08-17 |
| ES3031891T3 (en) | 2025-07-11 |
| EP3754020A1 (en) | 2020-12-23 |
| AU2015279862A1 (en) | 2017-01-12 |
| EP3161137B1 (en) | 2020-05-13 |
| US20220090057A1 (en) | 2022-03-24 |
| CN112210834A (zh) | 2021-01-12 |
| EP3161137A1 (en) | 2017-05-03 |
| ES2811518T3 (es) | 2021-03-12 |
| CN112210834B (zh) | 2025-02-25 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US12454688B2 (en) | Library preparation of tagged nucleic acid using tube add-on protocol | |
| EP3615690B1 (en) | Compositions and methods for improving sample identification in indexed nucleic acid libraries | |
| JP6181751B2 (ja) | 望まれない核酸配列のネガティブ選択のための組成物および方法 | |
| CA2952058A1 (en) | Methods and compositions for preparing sequencing libraries | |
| US20230279385A1 (en) | Sequence-Specific Targeted Transposition and Selection and Sorting of Nucleic Acids | |
| AU2021219665A1 (en) | Phi29 mutants and use thereof | |
| US20240318244A1 (en) | Click-chemistry based barcoding | |
| HK40034054A (en) | Library preparation of tagged nucleic acid using single tube add-on protocol | |
| HK40034054B (en) | Library preparation of tagged nucleic acid using single tube add-on protocol | |
| KR20230124636A (ko) | 멀티플렉스 반응에서 표적 서열의 고 감응성 검출을위한 조성물 및 방법 | |
| HK1231918B (en) | Library preparation of tagged nucleic acid using single tube add-on protocol | |
| HK1231918A1 (en) | Library preparation of tagged nucleic acid using single tube add-on protocol | |
| HK40015459B (en) | Compositions and methods for improving sample identification in indexed nucleic acid libraries | |
| HK40015459A (en) | Compositions and methods for improving sample identification in indexed nucleic acid libraries |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |
|
| EEER | Examination request |
Effective date: 20200326 |