CA2947426C - Multiplexed single cell gene expression analysis using template switch and tagmentation - Google Patents

Multiplexed single cell gene expression analysis using template switch and tagmentation Download PDF

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CA2947426C
CA2947426C CA2947426A CA2947426A CA2947426C CA 2947426 C CA2947426 C CA 2947426C CA 2947426 A CA2947426 A CA 2947426A CA 2947426 A CA2947426 A CA 2947426A CA 2947426 C CA2947426 C CA 2947426C
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droplet
cdna
strand synthesis
sequence
primer
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CA2947426A1 (en
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Fiona Kaper
Jian-Bing Fan
Neeraj SALATHIA
Gordon M. CANN
Arash Jamshidi
Alex Aravanis
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Illumina Inc
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1065Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
    • CCHEMISTRY; METALLURGY
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    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1096Processes for the isolation, preparation or purification of DNA or RNA cDNA Synthesis; Subtracted cDNA library construction, e.g. RT, RT-PCR
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B50/00Methods of creating libraries, e.g. combinatorial synthesis
    • C40B50/06Biochemical methods, e.g. using enzymes or whole viable microorganisms

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  • Biotechnology (AREA)
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  • Crystallography & Structural Chemistry (AREA)
  • Plant Pathology (AREA)
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  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • General Chemical & Material Sciences (AREA)
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  • Chemical Kinetics & Catalysis (AREA)
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CA2947426A 2014-04-29 2015-04-28 Multiplexed single cell gene expression analysis using template switch and tagmentation Active CA2947426C (en)

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US201461985983P 2014-04-29 2014-04-29
US61/985,983 2014-04-29
US201461987433P 2014-05-01 2014-05-01
US61/987,433 2014-05-01
PCT/US2015/028062 WO2015168161A2 (en) 2014-04-29 2015-04-28 Multiplexed single cell gene expression analysis using template switch and tagmentation

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US (2) US20170044525A1 (de)
EP (2) EP3137601B1 (de)
JP (1) JP6412954B2 (de)
CN (1) CN106459967A (de)
AU (4) AU2015253299B2 (de)
CA (2) CA3060708A1 (de)
SG (2) SG10201912516SA (de)
WO (1) WO2015168161A2 (de)

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