CA2945574C - Process for producing targeted mutations in bacterial genomes with crispr/cas system - Google Patents
Process for producing targeted mutations in bacterial genomes with crispr/cas system Download PDFInfo
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- CA2945574C CA2945574C CA2945574A CA2945574A CA2945574C CA 2945574 C CA2945574 C CA 2945574C CA 2945574 A CA2945574 A CA 2945574A CA 2945574 A CA2945574 A CA 2945574A CA 2945574 C CA2945574 C CA 2945574C
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| CA2945574A1 CA2945574A1 (en) | 2015-10-22 |
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| WO2013066438A2 (en) | 2011-07-22 | 2013-05-10 | President And Fellows Of Harvard College | Evaluation and improvement of nuclease cleavage specificity |
| US20150044192A1 (en) | 2013-08-09 | 2015-02-12 | President And Fellows Of Harvard College | Methods for identifying a target site of a cas9 nuclease |
| US9359599B2 (en) | 2013-08-22 | 2016-06-07 | President And Fellows Of Harvard College | Engineered transcription activator-like effector (TALE) domains and uses thereof |
| US9388430B2 (en) | 2013-09-06 | 2016-07-12 | President And Fellows Of Harvard College | Cas9-recombinase fusion proteins and uses thereof |
| US9340799B2 (en) | 2013-09-06 | 2016-05-17 | President And Fellows Of Harvard College | MRNA-sensing switchable gRNAs |
| US9737604B2 (en) | 2013-09-06 | 2017-08-22 | President And Fellows Of Harvard College | Use of cationic lipids to deliver CAS9 |
| WO2015066119A1 (en) | 2013-10-30 | 2015-05-07 | North Carolina State University | Compositions and methods related to a type-ii crispr-cas system in lactobacillus buchneri |
| KR20230054509A (ko) | 2013-11-07 | 2023-04-24 | 에디타스 메디신, 인코포레이티드 | 지배적인 gRNA를 이용하는 CRISPR-관련 방법 및 조성물 |
| US11053481B2 (en) | 2013-12-12 | 2021-07-06 | President And Fellows Of Harvard College | Fusions of Cas9 domains and nucleic acid-editing domains |
| US10787654B2 (en) | 2014-01-24 | 2020-09-29 | North Carolina State University | Methods and compositions for sequence guiding Cas9 targeting |
| AU2015217208B2 (en) | 2014-02-11 | 2018-08-30 | The Regents Of The University Of Colorado, A Body Corporate | CRISPR enabled multiplexed genome engineering |
| CN106460003A (zh) | 2014-04-08 | 2017-02-22 | 北卡罗来纳州立大学 | 用于使用crispr相关基因rna引导阻遏转录的方法和组合物 |
| AU2015298571B2 (en) | 2014-07-30 | 2020-09-03 | President And Fellows Of Harvard College | Cas9 proteins including ligand-dependent inteins |
| WO2016033298A1 (en) | 2014-08-28 | 2016-03-03 | North Carolina State University | Novel cas9 proteins and guiding features for dna targeting and genome editing |
| DE112016002056T5 (de) | 2015-05-06 | 2018-02-08 | Snipr Technologies Limited | Verändern mikrobieller Populationen und Modifizieren von Mikrobiomen |
| EP3303607A4 (en) | 2015-05-29 | 2018-10-10 | North Carolina State University | Methods for screening bacteria, archaea, algae, and yeast using crispr nucleic acids |
| CN107922918B (zh) | 2015-06-15 | 2022-10-21 | 北卡罗来纳州立大学 | 用于有效递送核酸和基于rna的抗微生物剂的方法和组合物 |
| WO2017058751A1 (en) | 2015-09-28 | 2017-04-06 | North Carolina State University | Methods and compositions for sequence specific antimicrobials |
| US12043852B2 (en) | 2015-10-23 | 2024-07-23 | President And Fellows Of Harvard College | Evolved Cas9 proteins for gene editing |
| WO2017112620A1 (en) | 2015-12-22 | 2017-06-29 | North Carolina State University | Methods and compositions for delivery of crispr based antimicrobials |
| WO2017118720A1 (en) * | 2016-01-08 | 2017-07-13 | Novozymes A/S | Genome editing in bacillus host cells |
| EP3420089B1 (en) * | 2016-02-26 | 2021-12-29 | LanzaTech NZ, Inc. | Crispr/cas systems for c-1 fixing bacteria |
| SG11201810755TA (en) * | 2016-05-01 | 2019-01-30 | Neemo Inc | Harnessing heterologous and endogenous crispr-cas machineries for efficient markerless genome editing in clostridium |
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| DK3474669T3 (da) | 2016-06-24 | 2022-06-27 | Univ Colorado Regents | Fremgangsmåde til generering af stregkodede kombinatoriske biblioteker |
| KR20250103795A (ko) | 2016-08-03 | 2025-07-07 | 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 | 아데노신 핵염기 편집제 및 그의 용도 |
| CN109804066A (zh) | 2016-08-09 | 2019-05-24 | 哈佛大学的校长及成员们 | 可编程cas9-重组酶融合蛋白及其用途 |
| US11542509B2 (en) | 2016-08-24 | 2023-01-03 | President And Fellows Of Harvard College | Incorporation of unnatural amino acids into proteins using base editing |
| AU2017342543B2 (en) | 2016-10-14 | 2024-06-27 | President And Fellows Of Harvard College | AAV delivery of nucleobase editors |
| WO2018119359A1 (en) | 2016-12-23 | 2018-06-28 | President And Fellows Of Harvard College | Editing of ccr5 receptor gene to protect against hiv infection |
| EP3592853A1 (en) | 2017-03-09 | 2020-01-15 | President and Fellows of Harvard College | Suppression of pain by gene editing |
| EP3592381A1 (en) | 2017-03-09 | 2020-01-15 | President and Fellows of Harvard College | Cancer vaccine |
| KR20190127797A (ko) | 2017-03-10 | 2019-11-13 | 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 | 시토신에서 구아닌으로의 염기 편집제 |
| CA3057192A1 (en) | 2017-03-23 | 2018-09-27 | President And Fellows Of Harvard College | Nucleobase editors comprising nucleic acid programmable dna binding proteins |
| WO2018209320A1 (en) | 2017-05-12 | 2018-11-15 | President And Fellows Of Harvard College | Aptazyme-embedded guide rnas for use with crispr-cas9 in genome editing and transcriptional activation |
| US10011849B1 (en) | 2017-06-23 | 2018-07-03 | Inscripta, Inc. | Nucleic acid-guided nucleases |
| US9982279B1 (en) | 2017-06-23 | 2018-05-29 | Inscripta, Inc. | Nucleic acid-guided nucleases |
| JP2020525049A (ja) * | 2017-06-25 | 2020-08-27 | エスエヌアイピーアール・テクノロジーズ・リミテッドＳｎｉｐｒ Ｔｅｃｈｎｏｌｏｇｉｅｓ Ｌｉｍｉｔｅｄ | 微生物集団の変更及び細菌叢の改変 |
| CN111801345A (zh) | 2017-07-28 | 2020-10-20 | 哈佛大学的校长及成员们 | 使用噬菌体辅助连续进化(pace)的进化碱基编辑器的方法和组合物 |
| GB201712733D0 (en) | 2017-08-08 | 2017-09-20 | Snipr Tech Ltd | Methods & cells |
| WO2019139645A2 (en) | 2017-08-30 | 2019-07-18 | President And Fellows Of Harvard College | High efficiency base editors comprising gam |
| GB201716845D0 (en) | 2017-10-13 | 2017-11-29 | Green Biologics Ltd | Process |
| CA3082251A1 (en) | 2017-10-16 | 2019-04-25 | The Broad Institute, Inc. | Uses of adenosine base editors |
| EP3724214A4 (en) | 2017-12-15 | 2021-09-01 | The Broad Institute Inc. | SYSTEMS AND METHODS FOR PREDICTING REPAIR RESULTS IN GENETIC ENGINEERING |
| US10760075B2 (en) | 2018-04-30 | 2020-09-01 | Snipr Biome Aps | Treating and preventing microbial infections |
| WO2019226953A1 (en) | 2018-05-23 | 2019-11-28 | The Broad Institute, Inc. | Base editors and uses thereof |
| KR102208031B1 (ko) * | 2018-08-20 | 2021-01-27 | 경상대학교산학협력단 | 표적 유전자의 활성산소종 매개 염기 돌연변이 유도 방법 |
| US12264313B2 (en) | 2018-10-01 | 2025-04-01 | North Carolina State University | Recombinant type I CRISPR-Cas system and uses thereof for genome modification and alteration of expression |
| EP3861120A4 (en) | 2018-10-01 | 2023-08-16 | North Carolina State University | Recombinant type i crispr-cas system |
| US12264330B2 (en) | 2018-10-01 | 2025-04-01 | North Carolina State University | Recombinant type I CRISPR-Cas system and uses thereof for killing target cells |
| US12203123B2 (en) | 2018-10-01 | 2025-01-21 | North Carolina State University | Recombinant type I CRISPR-Cas system and uses thereof for screening for variant cells |
| US11851663B2 (en) | 2018-10-14 | 2023-12-26 | Snipr Biome Aps | Single-vector type I vectors |
| US12281338B2 (en) | 2018-10-29 | 2025-04-22 | The Broad Institute, Inc. | Nucleobase editors comprising GeoCas9 and uses thereof |
| US12351837B2 (en) | 2019-01-23 | 2025-07-08 | The Broad Institute, Inc. | Supernegatively charged proteins and uses thereof |
| US11142751B2 (en) | 2019-03-07 | 2021-10-12 | Auburn University | CRISPR-cas system for Clostridium genome engineering and recombinant strains produced thereof |
| DE112020001306T5 (de) | 2019-03-19 | 2022-01-27 | Massachusetts Institute Of Technology | Verfahren und zusammensetzungen zur editierung von nukleotidsequenzen |
| US12473543B2 (en) | 2019-04-17 | 2025-11-18 | The Broad Institute, Inc. | Adenine base editors with reduced off-target effects |
| US12435330B2 (en) | 2019-10-10 | 2025-10-07 | The Broad Institute, Inc. | Methods and compositions for prime editing RNA |
| CN115698276A (zh) * | 2020-04-15 | 2023-02-03 | 阿拉斯加大学安克雷奇分校 | 用于生产异丁烯的方法和组合物 |
| US20230159955A1 (en) * | 2020-04-16 | 2023-05-25 | Zymergen Inc. | Circular-permuted nucleic acids for homology-directed editing |
| JP2023525304A (ja) | 2020-05-08 | 2023-06-15 | ザ ブロード インスティテュート，インコーポレーテッド | 標的二本鎖ヌクレオチド配列の両鎖同時編集のための方法および組成物 |
| WO2021252570A1 (en) * | 2020-06-10 | 2021-12-16 | North Carolina State University | Novel type i-c crispr-cas system from clostridia |
| CN112029699B (zh) * | 2020-11-04 | 2021-06-08 | 中国农业科学院北京畜牧兽医研究所 | 一种基于内源CRISPR-Cas系统的丁酸梭菌基因编辑系统及其应用 |
| EP4230721A1 (en) * | 2022-02-17 | 2023-08-23 | Evonik Operations GmbH | Microorganisms with reduced competence |
| GB202209518D0 (en) | 2022-06-29 | 2022-08-10 | Snipr Biome Aps | Treating & preventing E coli infections |
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| NO323345B1 (no) | 2002-01-07 | 2007-04-02 | Norwegian Inst Of Fisheries An | Forbedring av fiskeprodukter og fôr |
| GB0612301D0 (en) | 2006-06-21 | 2006-08-02 | Morvus Technology Ltd | DNA molecules and methods |
| CA2665120A1 (en) | 2006-10-03 | 2008-04-10 | Metabolic Explorer | Process for chromosomal integration and dna sequence replacement in clostridia |
| WO2009076464A2 (en) | 2007-12-10 | 2009-06-18 | Aliva Biopharmaceuticals, Inc. | Methods for sequential replacement of targeted region by homologous recombination |
| GB0802842D0 (en) * | 2008-02-15 | 2008-03-26 | Univ Nottingham | Synthetic operon construction in clostridia |
| US20100075424A1 (en) | 2008-05-08 | 2010-03-25 | Northwestern University | Methods and compositions for genetically engineering clostridia species |
| EP2206723A1 (en) | 2009-01-12 | 2010-07-14 | Bonas, Ulla | Modular DNA-binding domains |
| WO2010127111A1 (en) | 2009-04-30 | 2010-11-04 | The Trustees Of Comlumbia University In The City Of New York | In vivo assembly of dna via homologous recombination |
| WO2013133882A2 (en) | 2011-12-16 | 2013-09-12 | University Of Delaware | Recombinant clostridium organism and method for isolation of double-crossover allelic exchange mutants |
| WO2013141680A1 (en) | 2012-03-20 | 2013-09-26 | Vilnius University | RNA-DIRECTED DNA CLEAVAGE BY THE Cas9-crRNA COMPLEX |
| US9637739B2 (en) | 2012-03-20 | 2017-05-02 | Vilnius University | RNA-directed DNA cleavage by the Cas9-crRNA complex |
| EP4234696A3 (en) | 2012-12-12 | 2023-09-06 | The Broad Institute Inc. | Crispr-cas component systems, methods and compositions for sequence manipulation |
| US10612043B2 (en) * | 2013-03-09 | 2020-04-07 | Agilent Technologies, Inc. | Methods of in vivo engineering of large sequences using multiple CRISPR/cas selections of recombineering events |
| EP3004349B1 (en) * | 2013-05-29 | 2018-03-28 | Cellectis S.A. | A method for producing precise dna cleavage using cas9 nickase activity |
| EP3988649B1 (en) * | 2013-09-18 | 2024-11-27 | Kymab Limited | Methods, cells and organisms |
| AU2015217208B2 (en) * | 2014-02-11 | 2018-08-30 | The Regents Of The University Of Colorado, A Body Corporate | CRISPR enabled multiplexed genome engineering |
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| EP3132036B1 (en) | 2020-01-15 |
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| DK3132036T3 (da) | 2020-03-16 |
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| KR102272684B1 (ko) | 2021-07-02 |
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| BR112016023814B1 (pt) | 2023-02-07 |
| GB2530831B (en) | 2016-11-30 |
| JP6621465B2 (ja) | 2019-12-18 |
| CN106460000A (zh) | 2017-02-22 |
| WO2015159087A1 (en) | 2015-10-22 |
| GB201506460D0 (en) | 2015-06-03 |
| EP3132036A1 (en) | 2017-02-22 |
| GB2530831A (en) | 2016-04-06 |
| EP3132036B8 (en) | 2020-04-22 |
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