CA2903878C - Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer - Google Patents

Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer Download PDF

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Publication number
CA2903878C
CA2903878C CA2903878A CA2903878A CA2903878C CA 2903878 C CA2903878 C CA 2903878C CA 2903878 A CA2903878 A CA 2903878A CA 2903878 A CA2903878 A CA 2903878A CA 2903878 C CA2903878 C CA 2903878C
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gene
genes
score
level
group
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French (fr)
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CA2903878A1 (en
Inventor
Steven Shak
George Andrew Watson
Michael R. CRAGER
Tara Maddala
Margarita Lopatin
Audrey Goddard
Dejan Knezevic
Christer SVEDMAN
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Genomic Health Inc
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Genomic Health Inc
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    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16CCOMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
    • G16C99/00Subject matter not provided for in other groups of this subclass
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/30ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for calculating health indices; for individual health risk assessment
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16ZINFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS, NOT OTHERWISE PROVIDED FOR
    • G16Z99/00Subject matter not provided for in other main groups of this subclass
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/118Prognosis of disease development
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

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  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Physics & Mathematics (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Medical Informatics (AREA)
  • Organic Chemistry (AREA)
  • Pathology (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Immunology (AREA)
  • Zoology (AREA)
  • Public Health (AREA)
  • Wood Science & Technology (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Microbiology (AREA)
  • Epidemiology (AREA)
  • Data Mining & Analysis (AREA)
  • Biochemistry (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Databases & Information Systems (AREA)
  • Oncology (AREA)
  • Hospice & Palliative Care (AREA)
  • Primary Health Care (AREA)
  • Computing Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA2903878A 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer Active CA2903878C (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CA3093128A CA3093128C (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201361829100P 2013-05-30 2013-05-30
US61/829,100 2013-05-30
PCT/US2014/040003 WO2014194078A1 (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer

Related Child Applications (1)

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CA3093128A Division CA3093128C (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer

Publications (2)

Publication Number Publication Date
CA2903878A1 CA2903878A1 (en) 2014-12-04
CA2903878C true CA2903878C (en) 2020-10-27

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CA2903878A Active CA2903878C (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer
CA3093128A Active CA3093128C (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer

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CA3093128A Active CA3093128C (en) 2013-05-30 2014-05-29 Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer

Country Status (11)

Country Link
US (3) US10181008B2 (cg-RX-API-DMAC7.html)
EP (2) EP3825420A1 (cg-RX-API-DMAC7.html)
JP (3) JP2016521979A (cg-RX-API-DMAC7.html)
AU (2) AU2014274135B2 (cg-RX-API-DMAC7.html)
CA (2) CA2903878C (cg-RX-API-DMAC7.html)
DK (1) DK3004392T3 (cg-RX-API-DMAC7.html)
ES (1) ES2829415T3 (cg-RX-API-DMAC7.html)
IL (2) IL240919B (cg-RX-API-DMAC7.html)
MX (2) MX369911B (cg-RX-API-DMAC7.html)
SG (2) SG11201506987VA (cg-RX-API-DMAC7.html)
WO (1) WO2014194078A1 (cg-RX-API-DMAC7.html)

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Also Published As

Publication number Publication date
AU2020204502A1 (en) 2020-07-23
NZ711680A (en) 2021-05-28
US20190095575A1 (en) 2019-03-28
JP2018161151A (ja) 2018-10-18
IL283548A (en) 2021-07-29
MX2019013953A (es) 2020-01-30
EP3004392A1 (en) 2016-04-13
EP3004392A4 (en) 2017-01-25
HK1223132A1 (en) 2017-07-21
EP3825420A1 (en) 2021-05-26
AU2014274135A1 (en) 2015-09-24
SG10201709537PA (en) 2017-12-28
US20220044760A9 (en) 2022-02-10
CA3093128C (en) 2023-01-03
MX2015012782A (es) 2016-02-05
US10181008B2 (en) 2019-01-15
JP2020191896A (ja) 2020-12-03
JP2016521979A (ja) 2016-07-28
WO2014194078A1 (en) 2014-12-04
EP3004392B1 (en) 2020-09-30
US20210151122A1 (en) 2021-05-20
CA2903878A1 (en) 2014-12-04
IL240919B (en) 2021-06-30
SG11201506987VA (en) 2015-10-29
AU2014274135B2 (en) 2020-04-09
DK3004392T3 (da) 2020-10-26
IL240919A0 (en) 2015-10-29
US20160048632A1 (en) 2016-02-18
US11551782B2 (en) 2023-01-10
MX369911B (es) 2019-11-26
ES2829415T3 (es) 2021-05-31
NZ752676A (en) 2021-05-28
CA3093128A1 (en) 2014-12-04
AU2020204502B2 (en) 2022-02-17
JP7301798B2 (ja) 2023-07-03

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