CA2848064A1 - Eukaryotic organisms and methods for producing 1,3-butanediol - Google Patents

Eukaryotic organisms and methods for producing 1,3-butanediol Download PDF

Info

Publication number
CA2848064A1
CA2848064A1 CA2848064A CA2848064A CA2848064A1 CA 2848064 A1 CA2848064 A1 CA 2848064A1 CA 2848064 A CA2848064 A CA 2848064A CA 2848064 A CA2848064 A CA 2848064A CA 2848064 A1 CA2848064 A1 CA 2848064A1
Authority
CA
Canada
Prior art keywords
coa
acetyl
pathway comprises
bdo
pathway
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA2848064A
Other languages
English (en)
French (fr)
Inventor
Anthony P. Burgard
Mark J. Burk
Robin E. Osterhout
Priti Pharkya
Jingyi Li
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Genomatica Inc
Original Assignee
Genomatica Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genomatica Inc filed Critical Genomatica Inc
Publication of CA2848064A1 publication Critical patent/CA2848064A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/52—Genes encoding for enzymes or proenzymes
    • C—CHEMISTRY; METALLURGY
    • C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
    • C08G—MACROMOLECULAR COMPOUNDS OBTAINED OTHERWISE THAN BY REACTIONS ONLY INVOLVING UNSATURATED CARBON-TO-CARBON BONDS
    • C08G63/00—Macromolecular compounds obtained by reactions forming a carboxylic ester link in the main chain of the macromolecule
    • C08G63/02—Polyesters derived from hydroxycarboxylic acids or from polycarboxylic acids and polyhydroxy compounds
    • C08G63/12—Polyesters derived from hydroxycarboxylic acids or from polycarboxylic acids and polyhydroxy compounds derived from polycarboxylic acids and polyhydroxy compounds
    • C08G63/16—Dicarboxylic acids and dihydroxy compounds
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/14—Fungi; Culture media therefor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/14—Fungi; Culture media therefor
    • C12N1/16—Yeasts; Culture media therefor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20—Bacteria; Culture media therefor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00—Preparation of compounds containing saccharide radicals
    • C12P19/26—Preparation of nitrogen-containing carbohydrates
    • C12P19/28—N-glycosides
    • C12P19/30—Nucleotides
    • C12P19/32—Nucleotides having a condensed ring system containing a six-membered ring having two N-atoms in the same ring, e.g. purine nucleotides, nicotineamide-adenine dinucleotide
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P7/00—Preparation of oxygen-containing organic compounds
    • C12P7/02—Preparation of oxygen-containing organic compounds containing a hydroxy group
    • C12P7/04—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
    • C12P7/18—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic polyhydric

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Medicinal Chemistry (AREA)
  • General Chemical & Material Sciences (AREA)
  • Virology (AREA)
  • Mycology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Botany (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Polymers & Plastics (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
CA2848064A 2011-09-08 2012-09-07 Eukaryotic organisms and methods for producing 1,3-butanediol Abandoned CA2848064A1 (en)

Applications Claiming Priority (11)

Application Number Priority Date Filing Date Title
US201161532492P 2011-09-08 2011-09-08
US61/532,492 2011-09-08
US201161541951P 2011-09-30 2011-09-30
US61/541,951 2011-09-30
US201161558959P 2011-11-11 2011-11-11
US61/558,959 2011-11-11
US201261649039P 2012-05-18 2012-05-18
US61/649,039 2012-05-18
US201261655355P 2012-06-04 2012-06-04
US61/655,355 2012-06-04
PCT/US2012/054152 WO2013036764A1 (en) 2011-09-08 2012-09-07 Eukaryotic organisms and methods for producing 1,3-butanediol

Publications (1)

Publication Number Publication Date
CA2848064A1 true CA2848064A1 (en) 2013-03-14

Family

ID=47830417

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2848064A Abandoned CA2848064A1 (en) 2011-09-08 2012-09-07 Eukaryotic organisms and methods for producing 1,3-butanediol

Country Status (11)

Country Link
US (2) US20130066035A1 (enExample)
EP (1) EP2753699A4 (enExample)
KR (1) KR20140058691A (enExample)
CN (1) CN103917651A (enExample)
BR (1) BR112014005352A2 (enExample)
CA (1) CA2848064A1 (enExample)
IN (1) IN2014CN02584A (enExample)
MX (1) MX2014002787A (enExample)
PH (1) PH12014500513A1 (enExample)
SG (1) SG11201400466TA (enExample)
WO (1) WO2013036764A1 (enExample)

Families Citing this family (37)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8647642B2 (en) 2008-09-18 2014-02-11 Aviex Technologies, Llc Live bacterial vaccines resistant to carbon dioxide (CO2), acidic PH and/or osmolarity for viral infection prophylaxis or treatment
CN104870645A (zh) * 2012-09-24 2015-08-26 昭和电工株式会社 丁二醇的制造方法
CN105209414B (zh) 2013-03-15 2018-04-17 基因组股份公司 用于从发酵肉汤中获得1,4‑丁二醇的方法和系统
BR112015020904A2 (pt) 2013-03-15 2017-10-10 Genomatica Inc microrganismos e métodos para produção de butadieno e compostos relacionados por assimilação de formiato
EP3008178A1 (en) 2013-06-14 2016-04-20 Technical University of Denmark Microbial production of 3-hydroxypropionic acid
EP3058059A4 (en) 2013-10-18 2017-09-27 Biopetrolia AB ENGINEERING OF ACETYL-CoA METABOLISM IN YEAST
US20160376600A1 (en) 2013-11-25 2016-12-29 Genomatica, Inc. Methods for enhancing microbial production of specific length fatty alcohols in the presence of methanol
WO2015084633A1 (en) 2013-12-03 2015-06-11 Genomatica, Inc. Microorganisms and methods for improving product yields on methanol using acetyl-coa synthesis
CN118879602A (zh) 2013-12-27 2024-11-01 基因组股份公司 具有增加的碳通量效率的方法和生物
BR112017005665A2 (pt) 2014-09-18 2017-12-12 Genomatica Inc organismos microbianos não naturais com eficiência energética melhorada
EP3230236B1 (en) 2014-12-12 2024-05-01 Versalis S.p.A. Process for the production of 1,3 butadiene from 1,3 butanediol
RU2701863C2 (ru) 2015-02-23 2019-10-02 ВЕРСАЛИС С.п.А. Способ дегидратации кислородсодержащих соединений
US10676723B2 (en) 2015-05-11 2020-06-09 David Gordon Bermudes Chimeric protein toxins for expression by therapeutic bacteria
CN108026214B (zh) 2015-05-30 2021-03-02 基因组股份公司 乙烯基异构酶-脱水酶、烯醇脱水酶、芳樟醇脱水酶和/或巴豆醇脱水酶及其制备和使用
CN104988162B (zh) * 2015-06-08 2020-03-17 天津大学 辅因子再生模块在增强次级代谢产物在微生物中合成的应用
CN104988168A (zh) * 2015-06-08 2015-10-21 天津大学 乙酰辅酶a增强模块在增强7-脱氢胆甾醇在微生物中合成的应用
KR101704212B1 (ko) 2015-06-12 2017-02-08 씨제이제일제당 (주) 젖산을 생산하는 미생물 및 이를 이용한 젖산 제조 방법
US20170009263A1 (en) * 2015-07-08 2017-01-12 Invista North America S.A.R.L. Methods and host cells for enhancing production of 1, 3-butanediol
CN107849522A (zh) * 2015-07-21 2018-03-27 多伦多大学管理委员会 用于产生1,3‑丁二醇的方法和微生物
MY186400A (en) * 2015-10-06 2021-07-22 Dsm Ip Assets Bv Eukaryotic cell with increased production of fermentation product
SG11201803164SA (en) 2015-10-30 2018-05-30 Genomatica Inc Methanol dehydrogenase fusion proteins
US11129906B1 (en) 2016-12-07 2021-09-28 David Gordon Bermudes Chimeric protein toxins for expression by therapeutic bacteria
US11180535B1 (en) 2016-12-07 2021-11-23 David Gordon Bermudes Saccharide binding, tumor penetration, and cytotoxic antitumor chimeric peptides from therapeutic bacteria
CN110691847A (zh) 2017-03-31 2020-01-14 基因组股份公司 3-羟基丁酰基-CoA脱氢酶变体以及使用方法
KR102645531B1 (ko) 2017-03-31 2024-03-11 게노마티카 인코포레이티드 알데하이드 데하이드로게나제 변이체 및 사용 방법
US11608488B2 (en) 2017-07-11 2023-03-21 Adisseo France S.A.S. Enhanced metabolite-producing yeast
EP3652300A4 (en) * 2017-07-13 2021-06-23 Radici Chimica S.p.A. BIOLOGICAL PROCEDURES FOR MODIFYING CELLULAR CARBON FLOW
MX2020000369A (es) 2017-07-13 2020-08-17 Radici Chimica S P A Metodos biologicos para preparar terpenos.
US20210079334A1 (en) 2018-01-30 2021-03-18 Genomatica, Inc. Fermentation systems and methods with substantially uniform volumetric uptake rate of a reactive gaseous component
CN113166784A (zh) 2018-06-26 2021-07-23 基因组股份公司 包括具有合成或增强的甲基营养的那些工程微生物的、具有g3p→3pg酶和/或果糖-1，6-二磷酸酶的工程微生物
DK3853197T3 (da) 2018-09-21 2024-02-12 Versalis Spa Fremgangsmåde til bio-1,3-butandiol-oprensning fra en fermenterinsbouillon
WO2020068900A1 (en) 2018-09-26 2020-04-02 Genomatica, Inc. Aldehyde dehydrogenase variants and methods of using same
US20210332377A1 (en) * 2018-10-12 2021-10-28 Yield10 Bioscience, Inc. Genetically engineered plants that express a quinone-utilizing malate dehydrogenase
CN111386345B (zh) * 2018-10-30 2023-05-16 绿色地球研究所株式会社 1,3-丙二醇的制造方法
CN110564662B (zh) * 2019-09-30 2022-03-25 南京农业大学 一种整合型高效表达乙醛脱氢酶枯草杆菌的构建方法
CN115873881B (zh) * 2021-09-30 2026-07-03 北京化工大学 一种产1,3-丁二醇的基因工程菌及其应用
CN117701489B (zh) * 2024-02-05 2024-05-10 北京绿色康成生物技术有限公司 一种提高大肠杆菌生产1,3-丁二醇的方法

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1996036715A1 (en) * 1995-05-18 1996-11-21 University Of Stellenbosch A method and nucleotide sequence for transforming microorganisms
US8956850B2 (en) * 2008-06-05 2015-02-17 Butamax Advanced Biofuels Llc Enhanced pyruvate to acetolactate conversion in yeast
WO2008042338A2 (en) * 2006-09-28 2008-04-10 Microbia, Inc. Production of carotenoids in oleaginous yeast and fungi
JP2013505727A (ja) * 2009-09-27 2013-02-21 オーピーエックス バイオテクノロジーズ， インコーポレイテッド ３−ヒドロキシプロピオン酸および他の生成物を生成するための方法
CA2783096A1 (en) * 2009-12-10 2011-06-16 Genomatica, Inc. Methods and organisms for converting synthesis gas or other gaseous carbon sources and methanol to 1,3-butanediol
US8871488B2 (en) * 2010-06-18 2014-10-28 Butamax Advanced Biofuels Llc Recombinant host cells comprising phosphoketolases

Also Published As

Publication number Publication date
PH12014500513A1 (en) 2014-05-12
KR20140058691A (ko) 2014-05-14
US20170247709A1 (en) 2017-08-31
MX2014002787A (es) 2014-12-08
AU2012304428B2 (en) 2016-03-17
WO2013036764A1 (en) 2013-03-14
SG11201400466TA (en) 2014-04-28
EP2753699A1 (en) 2014-07-16
AU2012304428A1 (en) 2013-05-02
US20130066035A1 (en) 2013-03-14
BR112014005352A2 (pt) 2017-03-28
EP2753699A4 (en) 2015-08-19
CN103917651A (zh) 2014-07-09
IN2014CN02584A (enExample) 2015-08-07

Similar Documents

Publication Publication Date Title
US11655484B2 (en) Electron consuming ethanol production pathway to displace glycerol formation in S. cerevisiae
Lian et al. Metabolic engineering of a Saccharomyces cerevisiae strain capable of simultaneously utilizing glucose and galactose to produce enantiopure (2R, 3R)-butanediol
Fokum et al. Recent technological and strategical developments in the biomanufacturing of 1, 3-propanediol from glycerol
AU2016277014B2 (en) Microorganism producing lactic acid and method for producing lactic acid using same
US10190139B2 (en) Method for lactic acid production using Monascus strains modified for lactic acid production
CN103917651A (zh) 用于生产1,3-丁二醇的真核生物和方法
CN101896606A (zh) 在重组酵母中生产二羧酸
WO2011040901A2 (en) Enhanced pyruvate to acetolactate conversion in yeast
EP3795689A1 (en) Acid-resistant yeast with supressed ethanol production pathway and method for producing lactic acid using same
EP2350299A1 (en) Microaerobic cultures for converting glycerol to chemicals
AU2015293864A1 (en) Method for producing acetoin
Lee et al. Rewiring yeast metabolism for producing 2, 3-butanediol and two downstream applications: Techno-economic analysis and life cycle assessment of methyl ethyl ketone (MEK) and agricultural biostimulant production
WO2019213017A1 (en) Materials and methods for controlling oxidation and reduction in biosynthetic pathways of species of the genera ralstonia and cupriavidus and organisms related thereto
EP3172330B1 (en) Microorganism strains for the production of 2.3- butanediol
SI24955A (sl) Modificirana 6-fosfofrukto-1-kinaza, ki rekombinantnim celicam kvasovke Saccharomyces cerevisiae omogoča fermentativno uporabo pentoznih sladkorjev
KR102121538B1 (ko) 재조합 배수체 효모를 이용한 2,3-부탄다이올의 생산방법
US11999943B2 (en) Materials and methods for maximizing biosynthesis through alteration of pyruvate-acetyl-CoA-TCA balance in species of the genera ralstonia and cupriavidus and organisms related thereto
EP3612626B1 (en) Selected acetyl-coa synthase enzymes for reduction of acetate production in yeast
WO2023168233A1 (en) Genetically modified yeast and fermentation processes for the production of 3-hydroxypropionate
Lian Engineering Saccharomyces cerevisiae with enhanced supply of precursor metabolites for efficient production of fuels and chemicals
AU2007203093A2 (en) Xylitol dehydrogenase-inactivated and arabinose reductase-inhibited mutant of Candida Tropicalis, method of producing high-yield of xylitol using the same, and xylitol produced thereby
JP2021153524A (ja) 有機酸の製造方法

Legal Events

Date Code Title Description
FZDE Discontinued

Effective date: 20170907