BR112015013234B1 - Método para amplificação multiplex de sonda dependente de ligação - Google Patents

Método para amplificação multiplex de sonda dependente de ligação Download PDF

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Publication number
BR112015013234B1
BR112015013234B1 BR112015013234-0A BR112015013234A BR112015013234B1 BR 112015013234 B1 BR112015013234 B1 BR 112015013234B1 BR 112015013234 A BR112015013234 A BR 112015013234A BR 112015013234 B1 BR112015013234 B1 BR 112015013234B1
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BR
Brazil
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different
nucleic acids
target nucleic
probe
probes
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BR112015013234-0A
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English (en)
Portuguese (pt)
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BR112015013234A2 (pt
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Eric Olivares
Jon Sorenson
Tom Landers
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Invitae Corporation
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Publication of BR112015013234A2 publication Critical patent/BR112015013234A2/pt
Publication of BR112015013234B1 publication Critical patent/BR112015013234B1/pt

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6874Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2537/00Reactions characterised by the reaction format or use of a specific feature
    • C12Q2537/10Reactions characterised by the reaction format or use of a specific feature the purpose or use of
    • C12Q2537/16Assays for determining copy number or wherein the copy number is of special importance

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
BR112015013234-0A 2012-12-07 2013-12-06 Método para amplificação multiplex de sonda dependente de ligação BR112015013234B1 (pt)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201261734838P 2012-12-07 2012-12-07
US61/734.838 2012-12-07
PCT/US2013/073745 WO2014089536A1 (en) 2012-12-07 2013-12-06 Multiplex nucleic acid detection methods

Publications (2)

Publication Number Publication Date
BR112015013234A2 BR112015013234A2 (pt) 2018-02-06
BR112015013234B1 true BR112015013234B1 (pt) 2021-12-21

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Family Applications (1)

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BR112015013234-0A BR112015013234B1 (pt) 2012-12-07 2013-12-06 Método para amplificação multiplex de sonda dependente de ligação

Country Status (10)

Country Link
US (1) US9624533B2 (https=)
EP (1) EP2929044B1 (https=)
JP (1) JP6484177B2 (https=)
CN (1) CN104995309B (https=)
BR (1) BR112015013234B1 (https=)
CA (1) CA2894381C (https=)
CL (1) CL2015001568A1 (https=)
HK (1) HK1216653A1 (https=)
IL (1) IL239258B (https=)
WO (1) WO2014089536A1 (https=)

Families Citing this family (16)

* Cited by examiner, † Cited by third party
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IL285521B2 (en) 2013-08-19 2023-03-01 Singular Bio Inc Methods for single molecule detection
US20180023138A1 (en) * 2014-11-01 2018-01-25 Singular Bio, Inc. Assays for Single Molecule Detection and Use Thereof
CN113528623A (zh) * 2015-02-18 2021-10-22 卓异生物公司 用于单分子检测的测定及其应用
CN107083427B (zh) * 2016-04-01 2021-07-30 广州市基准医疗有限责任公司 Dna连接酶介导的dna扩增技术
WO2017181161A1 (en) * 2016-04-15 2017-10-19 Predicine, Inc. Systems and methods for detecting genetic alterations
US11174503B2 (en) 2016-09-21 2021-11-16 Predicine, Inc. Systems and methods for combined detection of genetic alterations
US11268137B2 (en) 2016-12-09 2022-03-08 Boreal Genomics, Inc. Linked ligation
EP3565906B1 (en) * 2017-01-05 2021-01-27 Tervisetehnoloogiate Arenduskeskus AS Quantifying dna sequences
US20180237853A1 (en) * 2017-02-19 2018-08-23 Yan Wang Methods, Compositions and Kits for Detection of Mutant Variants of Target Genes
CN107177693B (zh) * 2017-07-19 2020-11-06 中山大学 一种多倍pcr扩增方法
WO2019046768A1 (en) * 2017-08-31 2019-03-07 William Marsh Rice University SYMBOLIC SEQUENCING OF DNA AND RNA BY SEQUENCE CODING
CN110656159B (zh) * 2018-06-28 2024-01-09 深圳华大生命科学研究院 一种拷贝数变异的检测方法
JP7361774B2 (ja) * 2018-07-27 2023-10-16 ミリアド・ウィメンズ・ヘルス・インコーポレーテッド シーケンスリードの独立したアラインメントおよびペアリングによって高度に相同なシーケンスにおける遺伝的変異を検出するための方法
CN109402232A (zh) * 2018-10-23 2019-03-01 中国农业大学 一种用于检测的组合物及检测方法
AU2019375136B2 (en) * 2018-11-05 2025-10-16 Centre Henri Becquerel Method for diagnosing a cancer and associated kit
CN115786455A (zh) * 2022-07-12 2023-03-14 江阴检汇生物科技有限公司 一种基于mlpa-ngs方法用于司法鉴定的snp位点检测组合物及其应用

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US5508179A (en) 1994-03-18 1996-04-16 Bio-Rad Laboratories, Inc. Use of deoxyribose nicotinamide adenine dinucleotide to enhance the specificity of NAD+ -dependent ligation reactions
EP2369007B1 (en) * 1996-05-29 2015-07-29 Cornell Research Foundation, Inc. Detection of nucleic acid sequence differences using coupled ligase detection and polymerase chain reactions
US6544732B1 (en) 1999-05-20 2003-04-08 Illumina, Inc. Encoding and decoding of array sensors utilizing nanocrystals
GB0400584D0 (en) 2004-01-12 2004-02-11 Solexa Ltd Nucleic acid chacterisation
SE0401270D0 (sv) 2004-05-18 2004-05-18 Fredrik Dahl Method for amplifying specific nucleic acids in parallel
EP1991698B1 (en) * 2006-03-01 2013-12-18 Keygene N.V. High throughput sequence-based detection of snps using ligation assays
US8852864B2 (en) * 2008-01-17 2014-10-07 Sequenom Inc. Methods and compositions for the analysis of nucleic acids
CA2757300C (en) * 2009-04-01 2018-01-09 Dxterity Diagnostics Incorporated Chemical ligation dependent probe amplification (clpa)
CN102648295B (zh) * 2009-12-07 2017-08-08 伊鲁米那股份有限公司 用于多重基因分型的多样品索引
EP2526207A4 (en) * 2010-01-22 2013-10-09 Univ California COMPOSITIONS AND METHODS FOR CHEMICAL SCREENING AT SIGNATURE BASE
WO2012018397A2 (en) 2010-08-02 2012-02-09 The Regents Of The University Of California Molecular subtyping of oral squamous cell carcinoma to distinguish a subtype that is unlikely to metastasize
US9745616B2 (en) * 2011-05-17 2017-08-29 Dxterity Diagnostics Incorporated Methods and compositions for detecting target nucleic acids

Also Published As

Publication number Publication date
HK1216653A1 (zh) 2016-11-25
EP2929044B1 (en) 2019-02-06
CA2894381A1 (en) 2014-06-12
CN104995309A (zh) 2015-10-21
EP2929044A4 (en) 2016-07-13
US9624533B2 (en) 2017-04-18
WO2014089536A1 (en) 2014-06-12
IL239258B (en) 2019-12-31
US20140235470A1 (en) 2014-08-21
JP6484177B2 (ja) 2019-03-13
JP2016500257A (ja) 2016-01-12
EP2929044A1 (en) 2015-10-14
IL239258A0 (en) 2015-07-30
CN104995309B (zh) 2020-12-08
CA2894381C (en) 2021-01-12
CL2015001568A1 (es) 2016-08-26
BR112015013234A2 (pt) 2018-02-06

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Legal Events

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B06F Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette]
B06F Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette]
B06I Publication of requirement cancelled [chapter 6.9 patent gazette]

Free format text: ANULADA A PUBLICACAO CODIGO 6.6.1 NA RPI NO 2462 DE 13/03/2018 POR TER SIDO INDEVIDA.

B06U Preliminary requirement: requests with searches performed by other patent offices: procedure suspended [chapter 6.21 patent gazette]
B06A Patent application procedure suspended [chapter 6.1 patent gazette]
B25G Requested change of headquarter approved

Owner name: INVITAE CORPORATION (US)

B09A Decision: intention to grant [chapter 9.1 patent gazette]
B16A Patent or certificate of addition of invention granted [chapter 16.1 patent gazette]

Free format text: PRAZO DE VALIDADE: 20 (VINTE) ANOS CONTADOS A PARTIR DE 06/12/2013, OBSERVADAS AS CONDICOES LEGAIS.