AU730154B2 - Methods and compositions for detection of specific nucleotide sequences - Google Patents
Methods and compositions for detection of specific nucleotide sequences Download PDFInfo
- Publication number
- AU730154B2 AU730154B2 AU11568/97A AU1156897A AU730154B2 AU 730154 B2 AU730154 B2 AU 730154B2 AU 11568/97 A AU11568/97 A AU 11568/97A AU 1156897 A AU1156897 A AU 1156897A AU 730154 B2 AU730154 B2 AU 730154B2
- Authority
- AU
- Australia
- Prior art keywords
- pnas
- nucleic acid
- tail
- dna
- target
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6839—Triple helix formation or other higher order conformations in hybridisation assays
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Biotechnology (AREA)
- Genetics & Genomics (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Immunology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Saccharide Compounds (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US593895P | 1995-10-27 | 1995-10-27 | |
| US60/005938 | 1995-10-27 | ||
| PCT/US1996/017191 WO1997015691A1 (en) | 1995-10-27 | 1996-10-25 | Methods and compositions for detection of specific nucleotide sequences |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU1156897A AU1156897A (en) | 1997-05-15 |
| AU730154B2 true AU730154B2 (en) | 2001-03-01 |
Family
ID=21718453
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU11568/97A Ceased AU730154B2 (en) | 1995-10-27 | 1996-10-25 | Methods and compositions for detection of specific nucleotide sequences |
Country Status (8)
| Country | Link |
|---|---|
| US (4) | US5962225A (https=) |
| EP (1) | EP0864002A4 (https=) |
| JP (1) | JPH11513887A (https=) |
| KR (1) | KR19990067080A (https=) |
| AU (1) | AU730154B2 (https=) |
| CA (1) | CA2235804A1 (https=) |
| MX (1) | MX9803308A (https=) |
| WO (1) | WO1997015691A1 (https=) |
Families Citing this family (41)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JPH11513887A (ja) | 1995-10-27 | 1999-11-30 | ランバーグ,エリオット,アール. | 特定のヌクレオチド配列の検出方法および組成物 |
| US20050069923A1 (en) * | 1996-07-08 | 2005-03-31 | Mullis Kary Banks | Dual bead assays using cleavable spacers and/or ligation to improve specificity and sensitivity including related methods and apparatus |
| KR20010032036A (ko) * | 1997-11-12 | 2001-04-16 | 추후제출 | 특이적 뉴클레오타이드 서열의 검출방법 및 조성물 |
| WO2000029624A2 (en) * | 1998-11-19 | 2000-05-25 | Cygene, Inc. | Methods and compositions for detection of nucleic acid sequences and signal amplification |
| WO2000075373A2 (en) * | 1999-05-20 | 2000-12-14 | Illumina, Inc. | Combinatorial decoding of random nucleic acid arrays |
| ATE456677T1 (de) * | 1999-07-09 | 2010-02-15 | Gen Probe Inc | Hiv-1 detektion mittels nukleinsäureamplifizierung |
| AU1468201A (en) * | 1999-11-03 | 2001-05-14 | Cygene, Inc. | Methods and compositions for analysis of snps and strs |
| JP2003523185A (ja) * | 2000-01-13 | 2003-08-05 | イムニベスト・コーポレイション | 強磁性流体に基づくアレイ |
| GB0008618D0 (en) * | 2000-04-08 | 2000-05-31 | Univ Strathclyde | Analyte detection & apparatus therefor |
| DE60125312T2 (de) * | 2000-10-26 | 2007-06-06 | Agilent Technologies, Inc. (n.d. Ges. d. Staates Delaware), Santa Clara | Mikroarray |
| EP1921451A3 (en) | 2001-05-22 | 2008-05-28 | Cygene, Inc. | Complement mediated assays for in vivo and in vitro methods |
| WO2003052144A1 (en) * | 2001-12-14 | 2003-06-26 | Cygene, Inc. | Diagnostic assays for bcwa |
| WO2003065358A2 (en) * | 2002-01-28 | 2003-08-07 | Burstein Technologies, Inc. | Methods and apparatus for logical triggering of an optical bio-disc |
| US7251210B2 (en) * | 2002-01-31 | 2007-07-31 | Burstein Technologies, Inc. | Method for triggering through disc grooves and related optical analysis discs and system |
| WO2003071252A2 (en) | 2002-02-15 | 2003-08-28 | Exact Sciences Corporation | Methods for analysis of molecular events |
| US20040053399A1 (en) * | 2002-07-17 | 2004-03-18 | Rudolf Gilmanshin | Methods and compositions for analyzing polymers using chimeric tags |
| AU2003256814A1 (en) * | 2002-07-26 | 2004-02-16 | Alfa Wasserman, Inc. | Macromolecular protection assay |
| US20040137431A1 (en) * | 2002-11-04 | 2004-07-15 | Ramon Eritja | Target sequences for the detection of the west nile virus |
| US20040142329A1 (en) * | 2003-01-17 | 2004-07-22 | Ingeneus Corporation | Probe conjugation to increase multiplex binding motif preference |
| JP3923917B2 (ja) * | 2003-03-26 | 2007-06-06 | 株式会社東芝 | ターゲットの製造方法、標的配列検出方法、ターゲットおよび標的配列検出用アッセイキット |
| AU2004265570B2 (en) * | 2003-05-13 | 2009-01-08 | Gen-Probe Incorporated | Method and kit for identifying antibiotic-resistant microorganisms |
| US7981607B2 (en) | 2004-08-27 | 2011-07-19 | Esoterix Genetic Laboratories LLC | Method for detecting recombinant event |
| SG155995A1 (en) * | 2004-09-24 | 2009-10-29 | Ingeneus Inc | Genomic assay |
| WO2006047787A2 (en) | 2004-10-27 | 2006-05-04 | Exact Sciences Corporation | Method for monitoring disease progression or recurrence |
| US9777314B2 (en) | 2005-04-21 | 2017-10-03 | Esoterix Genetic Laboratories, Llc | Analysis of heterogeneous nucleic acid samples |
| ATE505192T1 (de) * | 2005-06-09 | 2011-04-15 | Bristol Myers Squibb Co | Pharmazeutische zusammensetzung zur anwendung in der behandlung von personen mit mutant-kit- protein |
| US20070202512A1 (en) * | 2005-08-19 | 2007-08-30 | Bristol-Myers Squibb Company | Human single nucleotide polymorphisms associated with dose-dependent weight gain and methods of use thereof |
| WO2007033171A2 (en) * | 2005-09-12 | 2007-03-22 | Research & Diagnostic Systems, Inc. | Mycoplasma detection method and composition |
| EP1948820A2 (en) * | 2005-11-04 | 2008-07-30 | Bristol-Myers Squibb Pharma Company | T315a and f317i mutations of bcr-abl kinase domain |
| WO2007092941A2 (en) * | 2006-02-08 | 2007-08-16 | Oxonica, Inc. | Sers nanotag assays |
| WO2007109527A1 (en) * | 2006-03-17 | 2007-09-27 | Bristol-Myers Squibb Company | Methods of identifying and treating individuals exhibiting mutant bcr/abl kinase polypeptides |
| US7642049B2 (en) * | 2006-06-30 | 2010-01-05 | Bristol-Myers Squibb Company | Method for identifying HIV-1 protease inhibitors with reduced metabolic affects through detection of human resistin polymorphisms |
| WO2008052774A2 (en) * | 2006-10-31 | 2008-05-08 | Noxxon Pharma Ag | Methods for detection of a single- or double-stranded nucleic acid molecule |
| US7947447B2 (en) | 2007-01-16 | 2011-05-24 | Somalogic, Inc. | Method for generating aptamers with improved off-rates |
| US20110020797A1 (en) * | 2007-02-09 | 2011-01-27 | Bristol-Myers Squibb Company | Methods For Identifying Patients With An Increased Likelihood Of Responding To DPP-IV Inhibitors |
| DK2172566T4 (da) * | 2007-07-17 | 2022-06-13 | Somalogic Inc | Fremgangsmåde til generering af aptamerer med forbedrede off-rates |
| EP2993239A1 (en) | 2008-05-16 | 2016-03-09 | AstraZeneca AB | Methods for identifying subjects with an increased likelihood of responding to dpp-iv inhibitors |
| CA2808233C (en) | 2010-03-03 | 2017-07-11 | Somalogic, Inc. | Aptamers to 4-1bb and their use in treating diseases and disorders |
| EP3345915B1 (en) | 2010-04-12 | 2021-11-24 | Somalogic, Inc. | 5-position modified pyrimidines and their use |
| WO2015070173A1 (en) * | 2013-11-08 | 2015-05-14 | Isis Pharmaceuticals, Inc. | Compounds and methods for detecting oligonucleotides |
| CN112424371B (zh) * | 2018-06-07 | 2024-06-28 | 美国安进公司 | 蛋白质-多核苷酸缀合物的检测测定 |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4775619A (en) * | 1984-10-16 | 1988-10-04 | Chiron Corporation | Polynucleotide determination with selectable cleavage sites |
Family Cites Families (21)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5258506A (en) | 1984-10-16 | 1993-11-02 | Chiron Corporation | Photolabile reagents for incorporation into oligonucleotide chains |
| US4683202A (en) * | 1985-03-28 | 1987-07-28 | Cetus Corporation | Process for amplifying nucleic acid sequences |
| US4683195A (en) * | 1986-01-30 | 1987-07-28 | Cetus Corporation | Process for amplifying, detecting, and/or-cloning nucleic acid sequences |
| FR2596773B1 (fr) | 1986-04-04 | 1988-06-24 | Pasteur Institut | Sonde monocatenaire marquee, non radioactive, procede pour sa fabrication et procede de detection d'une sequence nucleotidique determinee a l'aide de cette sonde |
| US5422251A (en) | 1986-11-26 | 1995-06-06 | Princeton University | Triple-stranded nucleic acids |
| US5176996A (en) * | 1988-12-20 | 1993-01-05 | Baylor College Of Medicine | Method for making synthetic oligonucleotides which bind specifically to target sites on duplex DNA molecules, by forming a colinear triplex, the synthetic oligonucleotides and methods of use |
| US5273881A (en) * | 1990-05-07 | 1993-12-28 | Daikin Industries, Ltd. | Diagnostic applications of double D-loop formation |
| CA2095624C (en) * | 1990-11-09 | 2000-06-13 | Rafael D. Camerini-Otero | Method of targeting dna |
| DE69132765T2 (de) * | 1990-12-24 | 2002-02-21 | Enzo Diagnostics, Inc. | Verfahren zum Nachweis eines Zielpolynukleotids in einer Probe unter Verwendung eines Reagenz, das den Hintergrund verringert, und eine dieses Reagenz enthaltende Zusammensetzung und Kit. |
| US5607924A (en) | 1992-01-21 | 1997-03-04 | Pharmacyclics, Inc. | DNA photocleavage using texaphyrins |
| WO1993018187A1 (en) * | 1992-03-13 | 1993-09-16 | California Institute Of Technology | Triple helix recognition of dna |
| US5583032A (en) | 1992-10-21 | 1996-12-10 | The Cleveland Clinic Foundation And National Institutes Of Health | Method of cleaving specific strands of RNA |
| US5422253A (en) | 1992-12-07 | 1995-06-06 | Wisconsin Alumni Research Foundation | Method of site specific nucleic acid cleavage |
| US5482836A (en) * | 1993-01-14 | 1996-01-09 | The Regents Of The University Of California | DNA purification by triplex-affinity capture and affinity capture electrophoresis |
| US5518901A (en) * | 1993-04-19 | 1996-05-21 | Murtagh; James J. | Methods for adapting nucleic acid for detection, sequencing, and cloning using exonuclease |
| DE4344742A1 (de) * | 1993-06-09 | 1994-12-15 | Boehringer Mannheim Gmbh | Verfahren zur Immobilisierung von Nukleinsäuren |
| US5599922A (en) | 1994-03-18 | 1997-02-04 | Lynx Therapeutics, Inc. | Oligonucleotide N3'-P5' phosphoramidates: hybridization and nuclease resistance properties |
| US5726297A (en) | 1994-03-18 | 1998-03-10 | Lynx Therapeutics, Inc. | Oligodeoxyribonucleotide N3' P5' phosphoramidates |
| US5714328A (en) | 1995-06-07 | 1998-02-03 | Board Of Regents, The University Of Texas System | RNA photocleavage using texaphyrins |
| JPH11513887A (ja) | 1995-10-27 | 1999-11-30 | ランバーグ,エリオット,アール. | 特定のヌクレオチド配列の検出方法および組成物 |
| US5834198A (en) | 1996-03-21 | 1998-11-10 | Boehringer Mamnnheim Gmbh | Selective photoinducted flavin-dependent cleavage of RNA at G-U base pairs and kits therefor |
-
1996
- 1996-10-25 JP JP9516836A patent/JPH11513887A/ja not_active Ceased
- 1996-10-25 EP EP96942723A patent/EP0864002A4/en not_active Withdrawn
- 1996-10-25 WO PCT/US1996/017191 patent/WO1997015691A1/en not_active Ceased
- 1996-10-25 AU AU11568/97A patent/AU730154B2/en not_active Ceased
- 1996-10-25 CA CA002235804A patent/CA2235804A1/en not_active Abandoned
- 1996-10-25 KR KR1019980703020A patent/KR19990067080A/ko not_active Ceased
- 1996-10-25 US US08/739,069 patent/US5962225A/en not_active Expired - Fee Related
-
1998
- 1998-04-27 MX MX9803308A patent/MX9803308A/es unknown
-
1999
- 1999-05-17 US US09/313,121 patent/US6100040A/en not_active Expired - Fee Related
-
2000
- 2000-08-07 US US09/633,848 patent/US6458540B1/en not_active Expired - Fee Related
-
2001
- 2001-11-05 US US09/992,128 patent/US20020119475A1/en not_active Abandoned
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4775619A (en) * | 1984-10-16 | 1988-10-04 | Chiron Corporation | Polynucleotide determination with selectable cleavage sites |
Also Published As
| Publication number | Publication date |
|---|---|
| KR19990067080A (ko) | 1999-08-16 |
| CA2235804A1 (en) | 1997-05-01 |
| EP0864002A1 (en) | 1998-09-16 |
| US20020119475A1 (en) | 2002-08-29 |
| WO1997015691A1 (en) | 1997-05-01 |
| US5962225A (en) | 1999-10-05 |
| JPH11513887A (ja) | 1999-11-30 |
| AU1156897A (en) | 1997-05-15 |
| US6100040A (en) | 2000-08-08 |
| EP0864002A4 (en) | 1999-07-28 |
| US6458540B1 (en) | 2002-10-01 |
| MX9803308A (es) | 1998-11-29 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FGA | Letters patent sealed or granted (standard patent) | ||
| MK14 | Patent ceased section 143(a) (annual fees not paid) or expired |