AU2020317617A1 - Detection of genomic sequences using combinations of probes, probe molecules and arrays comprising the probes for the specific detection of organisms - Google Patents
Detection of genomic sequences using combinations of probes, probe molecules and arrays comprising the probes for the specific detection of organisms Download PDFInfo
- Publication number
- AU2020317617A1 AU2020317617A1 AU2020317617A AU2020317617A AU2020317617A1 AU 2020317617 A1 AU2020317617 A1 AU 2020317617A1 AU 2020317617 A AU2020317617 A AU 2020317617A AU 2020317617 A AU2020317617 A AU 2020317617A AU 2020317617 A1 AU2020317617 A1 AU 2020317617A1
- Authority
- AU
- Australia
- Prior art keywords
- probe
- genome
- virtual
- seq
- amplicon
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
- C12Q2565/10—Detection mode being characterised by the assay principle
- C12Q2565/102—Multiple non-interacting labels
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
- C12Q2565/50—Detection characterised by immobilisation to a surface
- C12Q2565/501—Detection characterised by immobilisation to a surface being an array of oligonucleotides
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Analytical Chemistry (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201962876413P | 2019-07-19 | 2019-07-19 | |
| US62/876,413 | 2019-07-19 | ||
| US202063004664P | 2020-04-03 | 2020-04-03 | |
| US63/004,664 | 2020-04-03 | ||
| PCT/EP2020/070308 WO2021013736A1 (en) | 2019-07-19 | 2020-07-17 | Detection of genomic sequences using combinations of probes, probe molecules and arrays comprising the probes for the specific detection of organisms |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AU2020317617A1 true AU2020317617A1 (en) | 2022-03-03 |
Family
ID=71670264
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2020317617A Abandoned AU2020317617A1 (en) | 2019-07-19 | 2020-07-17 | Detection of genomic sequences using combinations of probes, probe molecules and arrays comprising the probes for the specific detection of organisms |
Country Status (14)
| Country | Link |
|---|---|
| US (1) | US20220267833A1 (https=) |
| EP (1) | EP3999658A1 (https=) |
| JP (1) | JP2022540716A (https=) |
| KR (1) | KR20220035482A (https=) |
| CN (1) | CN114269944A (https=) |
| AU (1) | AU2020317617A1 (https=) |
| BR (1) | BR112021026672A2 (https=) |
| CA (1) | CA3147364A1 (https=) |
| IL (1) | IL289760A (https=) |
| MX (1) | MX2022000628A (https=) |
| PH (1) | PH12022550137A1 (https=) |
| TW (1) | TW202117021A (https=) |
| WO (1) | WO2021013736A1 (https=) |
| ZA (1) | ZA202200284B (https=) |
Families Citing this family (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US11562057B2 (en) | 2020-02-05 | 2023-01-24 | Quantum Digital Solutions Corporation | Ecosystem security platforms for enabling data exchange between members of a digital ecosystem using digital genomic data sets |
| EP4679262A3 (en) | 2021-02-04 | 2026-04-01 | Quantum Digital Solutions Corporation | Cyphergenics-based ecosystem security platforms |
| WO2022169969A1 (en) * | 2021-02-04 | 2022-08-11 | Quantum Digital Solutions Corporation | Cyphergenics-based ecosystem security platforms |
| WO2024172833A2 (en) | 2022-08-03 | 2024-08-22 | Quantum Digital Solutions Corporation | Cyphergenics-enabled digital ecosystems and cyphergenics-enabled digital signatures |
| WO2026006533A1 (en) | 2024-06-26 | 2026-01-02 | Quantum Digital Solutions Corporation | Collusion-resistant identity-based and quantum-resilient secure correlation schemes |
Family Cites Families (11)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5066584A (en) | 1988-09-23 | 1991-11-19 | Cetus Corporation | Methods for generating single stranded dna by the polymerase chain reaction |
| US6638719B1 (en) * | 1999-07-14 | 2003-10-28 | Affymetrix, Inc. | Genotyping biallelic markers |
| US20030134293A1 (en) * | 1999-11-16 | 2003-07-17 | Zhiping Liu | Method for rapid and accurate identification of microorganisms |
| US7205104B2 (en) * | 2000-03-24 | 2007-04-17 | Eppendorf Array Technologies Sa (Eat) | Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays |
| CN1280422C (zh) | 2004-08-26 | 2006-10-18 | 北京博奥生物芯片有限责任公司 | 一种不对称pcr扩增方法及其应用 |
| US20060228718A1 (en) * | 2005-04-11 | 2006-10-12 | National Cheng Kung University | Method for rapidly identifying bacteria and kit thereof |
| US20110151453A1 (en) * | 2007-07-11 | 2011-06-23 | Bergeron Michel G | Nucleic acid sequences and combination thereof for sensitive amplification and detection of bacterial and fungal sepsis pathogens |
| EP3181700A1 (en) | 2015-12-18 | 2017-06-21 | Safeguard Biosystems Holdings Ltd. | Three-dimensional polymer networks with channels situated therein |
| EP3199629A1 (en) | 2016-01-30 | 2017-08-02 | Safeguard Biosystems Holdings Ltd. | Bead beating tube and method for extracting deoxyribonucleic acid and/or ribonucleic acid from microorganisms |
| EP3418741A1 (en) | 2017-06-19 | 2018-12-26 | Safeguard Biosystems Holdings Ltd. | Three-dimensional polymer networks and their use |
| US10513730B2 (en) | 2017-11-22 | 2019-12-24 | Safeguard Biosystems Holdings Ltd. | Asymmetric PCR methods, primers and kits |
-
2020
- 2020-07-17 MX MX2022000628A patent/MX2022000628A/es unknown
- 2020-07-17 KR KR1020227005634A patent/KR20220035482A/ko not_active Withdrawn
- 2020-07-17 AU AU2020317617A patent/AU2020317617A1/en not_active Abandoned
- 2020-07-17 BR BR112021026672A patent/BR112021026672A2/pt unknown
- 2020-07-17 WO PCT/EP2020/070308 patent/WO2021013736A1/en not_active Ceased
- 2020-07-17 PH PH1/2022/550137A patent/PH12022550137A1/en unknown
- 2020-07-17 EP EP20742724.6A patent/EP3999658A1/en active Pending
- 2020-07-17 JP JP2022503578A patent/JP2022540716A/ja active Pending
- 2020-07-17 CA CA3147364A patent/CA3147364A1/en active Pending
- 2020-07-17 US US17/628,038 patent/US20220267833A1/en not_active Abandoned
- 2020-07-17 CN CN202080059564.6A patent/CN114269944A/zh active Pending
- 2020-07-17 TW TW109124256A patent/TW202117021A/zh unknown
-
2022
- 2022-01-05 ZA ZA2022/00284A patent/ZA202200284B/en unknown
- 2022-01-11 IL IL289760A patent/IL289760A/en unknown
Also Published As
| Publication number | Publication date |
|---|---|
| TW202117021A (zh) | 2021-05-01 |
| EP3999658A1 (en) | 2022-05-25 |
| WO2021013736A1 (en) | 2021-01-28 |
| US20220267833A1 (en) | 2022-08-25 |
| JP2022540716A (ja) | 2022-09-16 |
| CN114269944A (zh) | 2022-04-01 |
| IL289760A (en) | 2022-03-01 |
| PH12022550137A1 (en) | 2024-02-12 |
| ZA202200284B (en) | 2022-09-28 |
| MX2022000628A (es) | 2022-03-11 |
| BR112021026672A2 (pt) | 2022-02-15 |
| CA3147364A1 (en) | 2021-01-28 |
| KR20220035482A (ko) | 2022-03-22 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| MK4 | Application lapsed section 142(2)(d) - no continuation fee paid for the application |