AU2013302535B2 - Pectin degrading enzymes from Macrophomina phaseolina and uses thereof - Google Patents

Pectin degrading enzymes from Macrophomina phaseolina and uses thereof Download PDF

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Publication number
AU2013302535B2
AU2013302535B2 AU2013302535A AU2013302535A AU2013302535B2 AU 2013302535 B2 AU2013302535 B2 AU 2013302535B2 AU 2013302535 A AU2013302535 A AU 2013302535A AU 2013302535 A AU2013302535 A AU 2013302535A AU 2013302535 B2 AU2013302535 B2 AU 2013302535B2
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AU
Australia
Prior art keywords
seq
polypeptide
phaseolina
set forth
sequence
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Ceased
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AU2013302535A
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English (en)
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AU2013302535A1 (en
Inventor
Maqsudul Alam
Mohammed Monjurul Alam
Mohammed Samiul Haque
Mohammed Mosaddeque Hossen
Mohammed Shahidul Islam
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Bangladesh Jute Research Institute
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Bangladesh Jute Research Institute
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/52—Genes encoding for enzymes or proenzymes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14—Hydrolases (3)
    • C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
    • C12N9/18—Carboxylic ester hydrolases (3.1.1)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14—Hydrolases (3)
    • C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
    • C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14—Hydrolases (3)
    • C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
    • C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
    • C12N9/2405—Glucanases
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/88—Lyases (4.)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y301/00—Hydrolases acting on ester bonds (3.1)
    • C12Y301/01—Carboxylic ester hydrolases (3.1.1)
    • C12Y301/01011—Pectinesterase (3.1.1.11)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
    • C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
    • C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
    • C12Y302/01171—Rhamnogalacturonan hydrolase (3.2.1.171), i.e. rhamnogalacturonase
    • D—TEXTILES; PAPER
    • D06—TREATMENT OF TEXTILES OR THE LIKE; LAUNDERING; FLEXIBLE MATERIALS NOT OTHERWISE PROVIDED FOR
    • D06M—TREATMENT, NOT PROVIDED FOR ELSEWHERE IN CLASS D06, OF FIBRES, THREADS, YARNS, FABRICS, FEATHERS OR FIBROUS GOODS MADE FROM SUCH MATERIALS
    • D06M16/00—Biochemical treatment of fibres, threads, yarns, fabrics, or fibrous goods made from such materials, e.g. enzymatic
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y402/00—Carbon-oxygen lyases (4.2)
    • C12Y402/02—Carbon-oxygen lyases (4.2) acting on polysaccharides (4.2.2)
    • C12Y402/02002—Pectate lyase (4.2.2.2)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y402/00—Carbon-oxygen lyases (4.2)
    • C12Y402/02—Carbon-oxygen lyases (4.2) acting on polysaccharides (4.2.2)
    • C12Y402/02023—Rhamnogalacturonan endolyase (4.2.2.23)

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  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Wood Science & Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Plant Pathology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Textile Engineering (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Chemical Or Physical Treatment Of Fibers (AREA)
AU2013302535A 2012-08-16 2013-08-15 Pectin degrading enzymes from Macrophomina phaseolina and uses thereof Ceased AU2013302535B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201261683914P 2012-08-16 2012-08-16
US61/683,914 2012-08-16
PCT/US2013/055198 WO2014028772A2 (en) 2012-08-16 2013-08-15 Pectin degrading enzymes from macrophomina phaseolina and uses thereof

Publications (2)

Publication Number Publication Date
AU2013302535A1 AU2013302535A1 (en) 2015-03-26
AU2013302535B2 true AU2013302535B2 (en) 2018-12-06

Family

ID=50101609

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2013302535A Ceased AU2013302535B2 (en) 2012-08-16 2013-08-15 Pectin degrading enzymes from Macrophomina phaseolina and uses thereof

Country Status (16)

Country Link
US (1) US9765322B2 (https=)
EP (1) EP2885407B1 (https=)
JP (1) JP6644547B2 (https=)
KR (1) KR102043363B1 (https=)
CN (1) CN104837991A (https=)
AU (1) AU2013302535B2 (https=)
DK (1) DK2885407T3 (https=)
ES (1) ES2674922T3 (https=)
HK (1) HK1213597A1 (https=)
IN (1) IN2015DN02049A (https=)
MY (1) MY169809A (https=)
PL (1) PL2885407T3 (https=)
PT (1) PT2885407T (https=)
TR (1) TR201809053T4 (https=)
WO (1) WO2014028772A2 (https=)
ZA (1) ZA201501635B (https=)

Family Cites Families (19)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DK122686D0 (da) 1986-03-17 1986-03-17 Novo Industri As Fremstilling af proteiner
GB8702475D0 (en) 1987-02-04 1987-03-11 Ciba Geigy Ag Expression system
ES2063162T5 (es) 1988-07-28 2002-11-16 Novartis Ag Nuevo sistema de expresion.
DE3908813A1 (de) 1989-03-17 1990-09-20 Roehm Gmbh Verfahren zur expression eines aus aspergillus niger stammenden gens in einem aspergillus
IL108156A0 (en) 1992-12-23 1994-04-12 Novo Nordisk As An enzyme with polygalacturonase activity
US5605793A (en) 1994-02-17 1997-02-25 Affymax Technologies N.V. Methods for in vitro recombination
US6117679A (en) 1994-02-17 2000-09-12 Maxygen, Inc. Methods for generating polynucleotides having desired characteristics by iterative selection and recombination
CN101659926A (zh) 1994-06-30 2010-03-03 诺沃奇梅兹有限公司 非毒性、非产毒性、非致病性镰孢属表达系统及所用启动子和终止子
CN102080070B (zh) * 1995-03-17 2016-01-20 诺沃奇梅兹有限公司 新的内切葡聚糖酶
US6171820B1 (en) 1995-12-07 2001-01-09 Diversa Corporation Saturation mutagenesis in directed evolution
US5939250A (en) 1995-12-07 1999-08-17 Diversa Corporation Production of enzymes having desired activities by mutagenesis
US5965408A (en) 1996-07-09 1999-10-12 Diversa Corporation Method of DNA reassembly by interrupting synthesis
JP3534607B2 (ja) 1997-04-09 2004-06-07 花王株式会社 洗浄剤組成物
US7214786B2 (en) * 2000-12-14 2007-05-08 Kovalic David K Nucleic acid molecules and other molecules associated with plants and uses thereof for plant improvement
WO2003095638A1 (en) * 2002-05-14 2003-11-20 Novozymes A/S Pectate lyase variants
EP1507857A1 (en) 2002-05-30 2005-02-23 DSM IP Assets B.V. Novel pectinases and uses thereof
US10676751B2 (en) * 2008-02-29 2020-06-09 The Trustees Of The University Of Pennsylvania Production and use of plant degrading materials
WO2010070146A1 (en) * 2008-12-19 2010-06-24 Danisco A/S Process for production of an enzyme product
WO2010101158A1 (ja) 2009-03-02 2010-09-10 住友商事株式会社 クロストリジウム セルロボランス由来新規遺伝子及びその利用

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
GenBank Accession EX519280.1, 9 October 2007. *

Also Published As

Publication number Publication date
WO2014028772A2 (en) 2014-02-20
EP2885407B1 (en) 2018-06-13
BR112015003086A2 (pt) 2018-06-26
WO2014028772A3 (en) 2014-05-08
DK2885407T3 (en) 2018-07-16
US20150259667A1 (en) 2015-09-17
JP6644547B2 (ja) 2020-02-12
KR20150042849A (ko) 2015-04-21
JP2015529071A (ja) 2015-10-05
MY169809A (en) 2019-05-16
AU2013302535A1 (en) 2015-03-26
TR201809053T4 (tr) 2018-07-23
EP2885407A4 (en) 2016-05-11
PT2885407T (pt) 2018-07-02
CN104837991A (zh) 2015-08-12
KR102043363B1 (ko) 2019-11-11
EP2885407A2 (en) 2015-06-24
IN2015DN02049A (https=) 2015-08-14
ZA201501635B (en) 2016-01-27
ES2674922T3 (es) 2018-07-05
HK1213597A1 (zh) 2016-07-08
PL2885407T3 (pl) 2018-09-28
US9765322B2 (en) 2017-09-19

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