WO2012079010A2 - Improved method and kit for determining severity and progression of periodontal disease - Google Patents
Improved method and kit for determining severity and progression of periodontal disease Download PDFInfo
- Publication number
- WO2012079010A2 WO2012079010A2 PCT/US2011/064216 US2011064216W WO2012079010A2 WO 2012079010 A2 WO2012079010 A2 WO 2012079010A2 US 2011064216 W US2011064216 W US 2011064216W WO 2012079010 A2 WO2012079010 A2 WO 2012079010A2
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- periodontal disease
- patient
- il1b3877
- progression
- allele
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/118—Prognosis of disease development
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/172—Haplotypes
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2800/00—Detection or diagnosis of diseases
- G01N2800/18—Dental and oral disorders
Definitions
- Gingivitis is an early stage of the periodontal disease where the gums may become red, swollen and bleed easily. Gingivitis is usually painless and, if not treated, can advance to periodontitis, which may be classified by the magnitude of tissue destruction as mild, moderate, or severe. Periodontitis is primarily a disease of adults and is usually not detectable until after the age of 35. Usually bacteria that are present in dental plaque initiate periodontal disease. Toxins produced by the bacteria in the plaque activate the body's inflammatory and other immune mechanisms which ultimately lead to the destruction of the bone and gum tissue that support the teeth.
- the invention relates to the discovery of a polymorphism in the IL-1B gene which is associated with susceptibility to periodontal disease. Accordingly, ascertainment of genotype at this polymorphism provides a useful genetic test for susceptibility to periodontal disease.
- an allele is named by the nucleotide at the polymorphic site.
- IL-1RN (+2018) allele T refers to a form of the IL-1 RN gene which contains a thymine (T) at position +2018 of the plus strand.
- an isolated nucleic acid encoding one of the subject IL-1 polypeptides preferably includes no more than 10 kilobases (kb) of nucleic acid sequence which naturally immediately flanks the IL-1 gene in genomic DNA, more preferably no more than 5 kb of such naturally occurring flanking sequences, and most preferably less than 1.5 kb of such naturally occurring flanking sequence.
- kb kilobases
- any range of numbers recited in the specification or paragraphs hereinafter describing or claiming various aspects of the invention, such as that representing a particular set of properties, units of measure, conditions, physical states or percentages, is intended to literally incorporate expressly herein by reference or otherwise, any number falling within such range, including any subset of numbers or ranges subsumed within any range so recited.
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Analytical Chemistry (AREA)
- Genetics & Genomics (AREA)
- Molecular Biology (AREA)
- Immunology (AREA)
- Physics & Mathematics (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Pathology (AREA)
- Biomedical Technology (AREA)
- Hematology (AREA)
- Urology & Nephrology (AREA)
- Cell Biology (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
Priority Applications (9)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2011338210A AU2011338210B2 (en) | 2010-12-09 | 2011-12-09 | Improved method and kit for determining severity and progression of periodontal disease |
| BR112013014479-3A BR112013014479B1 (pt) | 2010-12-09 | 2011-12-09 | métodos para determinar a gravidade e progressão de doença periodontal |
| CN201180067082.6A CN103547680B (zh) | 2010-12-09 | 2011-12-09 | 用于确定牙周病的严重性和进展的改进方法和试剂盒 |
| RU2013131239A RU2664431C2 (ru) | 2010-12-09 | 2011-12-09 | Улучшенный способ и набор для определения тяжести и прогрессирования периодонтального заболевания |
| EP11846577.2A EP2649203B1 (en) | 2010-12-09 | 2011-12-09 | Improved method for determining severity and progression of periodontal disease |
| NZ612799A NZ612799A (en) | 2010-12-09 | 2011-12-09 | Improved method and kit for determining severity and progression of periodontal disease |
| SG2013044383A SG191078A1 (en) | 2010-12-09 | 2011-12-09 | Improved method and kit for determining severity and progression of periodontal disease |
| JP2013543383A JP6138692B2 (ja) | 2010-12-09 | 2011-12-09 | 歯周病の重症度および進行を決定するための改良された方法およびキット |
| AU2016202211A AU2016202211B2 (en) | 2010-12-09 | 2016-04-08 | Improved Method and Kit for Determining Severity and Progression of Periodontal Disease |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US42162810P | 2010-12-09 | 2010-12-09 | |
| US61/421,628 | 2010-12-09 | ||
| US201161452157P | 2011-03-13 | 2011-03-13 | |
| US61/452,157 | 2011-03-13 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| WO2012079010A2 true WO2012079010A2 (en) | 2012-06-14 |
| WO2012079010A3 WO2012079010A3 (en) | 2012-08-23 |
Family
ID=46207769
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/US2011/064216 Ceased WO2012079010A2 (en) | 2010-12-09 | 2011-12-09 | Improved method and kit for determining severity and progression of periodontal disease |
Country Status (10)
| Country | Link |
|---|---|
| US (3) | US20120208187A1 (enExample) |
| EP (1) | EP2649203B1 (enExample) |
| JP (2) | JP6138692B2 (enExample) |
| CN (1) | CN103547680B (enExample) |
| AU (2) | AU2011338210B2 (enExample) |
| BR (1) | BR112013014479B1 (enExample) |
| NZ (2) | NZ701432A (enExample) |
| RU (2) | RU2018122965A (enExample) |
| SG (1) | SG191078A1 (enExample) |
| WO (1) | WO2012079010A2 (enExample) |
Cited By (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2018130670A1 (en) * | 2017-01-12 | 2018-07-19 | Cardioforecast Ltd | Methods and kits for treating cardiovascular disease |
| US10894985B2 (en) | 2016-01-12 | 2021-01-19 | Sitokine Limited | Methods for predicting response to treatment |
Families Citing this family (8)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN106918706B (zh) * | 2015-12-25 | 2019-05-21 | 广州瑞博奥生物科技有限公司 | 一种检测牙周病相关蛋白的抗体芯片试剂盒 |
| GB201818627D0 (en) * | 2018-11-15 | 2019-01-02 | Mars Inc | Analytical systems |
| JP7097855B2 (ja) * | 2019-04-24 | 2022-07-08 | ジェネシスヘルスケア株式会社 | 歯周病のリスクを判定する方法 |
| CA3142662A1 (en) | 2019-06-06 | 2020-12-10 | Sitokine Limited | Compositions and methods for treating lung, colorectal and breast cancer |
| WO2021028469A1 (en) | 2019-08-12 | 2021-02-18 | Sitokine Limited | Compositions and methods for treating cytokine release syndrome and neurotoxicity |
| WO2021205013A1 (en) | 2020-04-09 | 2021-10-14 | Sitokine Limited | Compositions and methods for treating covid-19 |
| KR102571131B1 (ko) * | 2021-06-01 | 2023-08-24 | 부산대학교 산학협력단 | 치주염 감별용 바이오마커 조성물, 치주염 중증도 감별용 바이오마커 조성물, 및 이를 이용한 진단 키트 |
| EP4430621A1 (en) * | 2021-11-12 | 2024-09-18 | Mars, Incorporated | Systems and methods for generating health reports based on veterinary oral care health test |
Citations (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4582788A (en) | 1982-01-22 | 1986-04-15 | Cetus Corporation | HLA typing method and cDNA probes used therein |
| US4666828A (en) | 1984-08-15 | 1987-05-19 | The General Hospital Corporation | Test for Huntington's disease |
| US4801531A (en) | 1985-04-17 | 1989-01-31 | Biotechnology Research Partners, Ltd. | Apo AI/CIII genomic polymorphisms predictive of atherosclerosis |
| US5110920A (en) | 1982-01-22 | 1992-05-05 | Cetus Corporation | HLA typing method and DNA probes used therein |
| US5268267A (en) | 1987-08-21 | 1993-12-07 | The General Hospital Corporation | Method for diagnosing small cell carcinoma |
| US5272057A (en) | 1988-10-14 | 1993-12-21 | Georgetown University | Method of detecting a predisposition to cancer by the use of restriction fragment length polymorphism of the gene for human poly (ADP-ribose) polymerase |
| US5686246A (en) | 1995-08-03 | 1997-11-11 | Kornman; Kenneth S. | Detecting genetic predisposition to periodontal disease |
| WO2005108619A2 (en) | 2004-05-03 | 2005-11-17 | Interleukin Genetics, Inc. | Diagnostics and therapeutics for diseases associated with an il-1 inflammatory haplotype |
| US20050282198A1 (en) | 1997-05-29 | 2005-12-22 | Interleukin Genetics, Inc. | Diagnostics and therapeutics for diseases associated with an IL-1 inflammatory haplotype |
| US20080118920A1 (en) | 2004-05-03 | 2008-05-22 | Duff Gordon W | Diagnostics And Therapeutics For Diseases Associated With An Il-1 Inflammatory Haplotype |
Family Cites Families (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5328829A (en) | 1990-07-05 | 1994-07-12 | Forsyth Dental Infirmary For Children | Method of determining sites of active periodontal disease |
| GB9711040D0 (en) * | 1997-05-29 | 1997-07-23 | Duff Gordon W | Prediction of inflammatory disease |
| US6130042A (en) * | 1998-03-05 | 2000-10-10 | The United States Of America As Represented By The Department Of Health And Human Services | Compositions and methods for diagnosing periodontal disease |
| EP2304052A2 (en) * | 2008-05-02 | 2011-04-06 | Interleukin Genetics, Inc. | Detecting genetic predisposition to osteoarthritis associated conditions |
-
2011
- 2011-12-09 SG SG2013044383A patent/SG191078A1/en unknown
- 2011-12-09 CN CN201180067082.6A patent/CN103547680B/zh not_active Expired - Fee Related
- 2011-12-09 RU RU2018122965A patent/RU2018122965A/ru not_active Application Discontinuation
- 2011-12-09 BR BR112013014479-3A patent/BR112013014479B1/pt not_active IP Right Cessation
- 2011-12-09 NZ NZ701432A patent/NZ701432A/en not_active IP Right Cessation
- 2011-12-09 WO PCT/US2011/064216 patent/WO2012079010A2/en not_active Ceased
- 2011-12-09 US US13/316,198 patent/US20120208187A1/en not_active Abandoned
- 2011-12-09 RU RU2013131239A patent/RU2664431C2/ru not_active IP Right Cessation
- 2011-12-09 AU AU2011338210A patent/AU2011338210B2/en not_active Ceased
- 2011-12-09 EP EP11846577.2A patent/EP2649203B1/en not_active Not-in-force
- 2011-12-09 NZ NZ612799A patent/NZ612799A/en not_active IP Right Cessation
- 2011-12-09 JP JP2013543383A patent/JP6138692B2/ja active Active
-
2013
- 2013-08-08 US US13/962,637 patent/US9347090B2/en active Active
-
2016
- 2016-04-08 AU AU2016202211A patent/AU2016202211B2/en not_active Ceased
- 2016-05-02 US US15/144,263 patent/US20160244841A1/en not_active Abandoned
-
2017
- 2017-01-20 JP JP2017008513A patent/JP6622731B2/ja active Active
Patent Citations (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4582788A (en) | 1982-01-22 | 1986-04-15 | Cetus Corporation | HLA typing method and cDNA probes used therein |
| US5110920A (en) | 1982-01-22 | 1992-05-05 | Cetus Corporation | HLA typing method and DNA probes used therein |
| US4666828A (en) | 1984-08-15 | 1987-05-19 | The General Hospital Corporation | Test for Huntington's disease |
| US4801531A (en) | 1985-04-17 | 1989-01-31 | Biotechnology Research Partners, Ltd. | Apo AI/CIII genomic polymorphisms predictive of atherosclerosis |
| US5268267A (en) | 1987-08-21 | 1993-12-07 | The General Hospital Corporation | Method for diagnosing small cell carcinoma |
| US5272057A (en) | 1988-10-14 | 1993-12-21 | Georgetown University | Method of detecting a predisposition to cancer by the use of restriction fragment length polymorphism of the gene for human poly (ADP-ribose) polymerase |
| US5686246A (en) | 1995-08-03 | 1997-11-11 | Kornman; Kenneth S. | Detecting genetic predisposition to periodontal disease |
| US20050282198A1 (en) | 1997-05-29 | 2005-12-22 | Interleukin Genetics, Inc. | Diagnostics and therapeutics for diseases associated with an IL-1 inflammatory haplotype |
| WO2005108619A2 (en) | 2004-05-03 | 2005-11-17 | Interleukin Genetics, Inc. | Diagnostics and therapeutics for diseases associated with an il-1 inflammatory haplotype |
| US20080118920A1 (en) | 2004-05-03 | 2008-05-22 | Duff Gordon W | Diagnostics And Therapeutics For Diseases Associated With An Il-1 Inflammatory Haplotype |
Non-Patent Citations (2)
| Title |
|---|
| SAMBROOK ET AL.: "Molecular Cloning: A Laboratory Manual", 1989, COLD SPRING HARBOR LABORATORY PRESS |
| See also references of EP2649203A4 |
Cited By (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US10894985B2 (en) | 2016-01-12 | 2021-01-19 | Sitokine Limited | Methods for predicting response to treatment |
| WO2018130670A1 (en) * | 2017-01-12 | 2018-07-19 | Cardioforecast Ltd | Methods and kits for treating cardiovascular disease |
| US10329620B2 (en) | 2017-01-12 | 2019-06-25 | Cardioforecast Ltd. | Methods and kits for treating cardiovascular disease |
| US10337070B2 (en) | 2017-01-12 | 2019-07-02 | Cardioforecast Ltd. | Methods and kits for treating cardiovascular disease |
| US11486006B2 (en) | 2017-01-12 | 2022-11-01 | Sitokine Limited | Methods and kits for treating cardiovascular disease |
Also Published As
| Publication number | Publication date |
|---|---|
| JP6138692B2 (ja) | 2017-05-31 |
| JP2017121237A (ja) | 2017-07-13 |
| JP6622731B2 (ja) | 2019-12-18 |
| EP2649203A2 (en) | 2013-10-16 |
| AU2016202211B2 (en) | 2017-02-23 |
| EP2649203A4 (en) | 2014-05-07 |
| CN103547680A (zh) | 2014-01-29 |
| AU2016202211A1 (en) | 2016-05-05 |
| AU2011338210A1 (en) | 2013-07-25 |
| RU2018122965A3 (enExample) | 2019-04-11 |
| BR112013014479A2 (pt) | 2016-09-20 |
| JP2013544536A (ja) | 2013-12-19 |
| RU2013131239A (ru) | 2015-01-20 |
| US20120208187A1 (en) | 2012-08-16 |
| RU2018122965A (ru) | 2019-03-06 |
| RU2664431C2 (ru) | 2018-08-17 |
| CN103547680B (zh) | 2017-05-24 |
| NZ701432A (en) | 2016-06-24 |
| BR112013014479B1 (pt) | 2020-10-27 |
| US20160244841A1 (en) | 2016-08-25 |
| SG191078A1 (en) | 2013-07-31 |
| EP2649203B1 (en) | 2019-07-24 |
| US9347090B2 (en) | 2016-05-24 |
| WO2012079010A3 (en) | 2012-08-23 |
| AU2011338210B2 (en) | 2016-05-12 |
| NZ612799A (en) | 2015-04-24 |
| US20130337448A1 (en) | 2013-12-19 |
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