SG11201706356XA - Methods and systems for experiment design and analysis - Google Patents

Methods and systems for experiment design and analysis

Info

Publication number
SG11201706356XA
SG11201706356XA SG11201706356XA SG11201706356XA SG11201706356XA SG 11201706356X A SG11201706356X A SG 11201706356XA SG 11201706356X A SG11201706356X A SG 11201706356XA SG 11201706356X A SG11201706356X A SG 11201706356XA SG 11201706356X A SG11201706356X A SG 11201706356XA
Authority
SG
Singapore
Prior art keywords
analysis
systems
methods
experiment design
experiment
Prior art date
Application number
SG11201706356XA
Other languages
English (en)
Inventor
Scott Rickes
Lik Seng Lau
Kok Siong Teo
Zeng Wei Chu
Lian Seng Loh
Vanee Pho
Michael Uy
David Hoard
Sean Zimmerman
Original Assignee
Life Technologies Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Life Technologies Corp filed Critical Life Technologies Corp
Publication of SG11201706356XA publication Critical patent/SG11201706356XA/en

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/645Specially adapted constructive features of fluorimeters
    • G01N21/6452Individual samples arranged in a regular 2D-array, e.g. multiwell plates
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/645Specially adapted constructive features of fluorimeters
    • G01N21/6456Spatial resolved fluorescence measurements; Imaging
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0481Interaction techniques based on graphical user interfaces [GUI] based on specific properties of the displayed interaction object or a metaphor-based environment, e.g. interaction with desktop elements like windows or icons, or assisted by a cursor's changing behaviour or appearance
    • G06F3/0482Interaction with lists of selectable items, e.g. menus
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0484Interaction techniques based on graphical user interfaces [GUI] for the control of specific functions or operations, e.g. selecting or manipulating an object, an image or a displayed text element, setting a parameter value or selecting a range
    • G06F3/04842Selection of displayed objects or displayed text elements
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0484Interaction techniques based on graphical user interfaces [GUI] for the control of specific functions or operations, e.g. selecting or manipulating an object, an image or a displayed text element, setting a parameter value or selecting a range
    • G06F3/0485Scrolling or panning
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0487Interaction techniques based on graphical user interfaces [GUI] using specific features provided by the input device, e.g. functions controlled by the rotation of a mouse with dual sensing arrangements, or of the nature of the input device, e.g. tap gestures based on pressure sensed by a digitiser
    • G06F3/0488Interaction techniques based on graphical user interfaces [GUI] using specific features provided by the input device, e.g. functions controlled by the rotation of a mouse with dual sensing arrangements, or of the nature of the input device, e.g. tap gestures based on pressure sensed by a digitiser using a touch-screen or digitiser, e.g. input of commands through traced gestures
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T11/002D [Two Dimensional] image generation
    • G06T11/20Drawing from basic elements, e.g. lines or circles
    • G06T11/206Drawing of charts or graphs
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T3/00Geometric image transformations in the plane of the image
    • G06T3/40Scaling of whole images or parts thereof, e.g. expanding or contracting

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • General Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Pathology (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Human Computer Interaction (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Optics & Photonics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Data Mining & Analysis (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Biomedical Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Food Science & Technology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Automatic Analysis And Handling Materials Therefor (AREA)
  • User Interface Of Digital Computer (AREA)
SG11201706356XA 2015-02-06 2016-02-05 Methods and systems for experiment design and analysis SG11201706356XA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201562113006P 2015-02-06 2015-02-06
PCT/US2016/016827 WO2016127086A1 (en) 2015-02-06 2016-02-05 Methods and systems for experiment design and analysis

Publications (1)

Publication Number Publication Date
SG11201706356XA true SG11201706356XA (en) 2017-09-28

Family

ID=55411750

Family Applications (2)

Application Number Title Priority Date Filing Date
SG11201706356XA SG11201706356XA (en) 2015-02-06 2016-02-05 Methods and systems for experiment design and analysis
SG10202006588UA SG10202006588UA (en) 2015-02-06 2016-02-05 Methods and systems for experiment design and analysis

Family Applications After (1)

Application Number Title Priority Date Filing Date
SG10202006588UA SG10202006588UA (en) 2015-02-06 2016-02-05 Methods and systems for experiment design and analysis

Country Status (9)

Country Link
US (1) US10102653B2 (enExample)
EP (1) EP3254086B1 (enExample)
JP (1) JP6496417B2 (enExample)
KR (1) KR102541746B1 (enExample)
CN (1) CN107223249B (enExample)
BR (1) BR112017016932B1 (enExample)
RU (1) RU2719346C2 (enExample)
SG (2) SG11201706356XA (enExample)
WO (1) WO2016127086A1 (enExample)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20210071242A1 (en) * 2018-01-29 2021-03-11 Gen-Probe Incorporated Analytical systems and methods
USD872109S1 (en) 2018-08-07 2020-01-07 Caterpillar Inc. Display screen or portion thereof with graphical user interface
USD1089275S1 (en) 2021-11-03 2025-08-19 Caterpillar Inc. Display screen or portion thereof with graphical user interface

Family Cites Families (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ATE275208T1 (de) * 1999-03-27 2004-09-15 Applera Corp Methoden für exogene, interne kontrollen während der amplifizierung von nukleinsäuren
CA2380307A1 (en) * 1999-07-21 2001-02-01 Tropix, Inc. Luminescence detection workstation
WO2003006692A1 (en) * 2001-07-11 2003-01-23 Applera Corporation Internal calibration standards for electrophoretic analyses
US7363168B2 (en) 2001-10-02 2008-04-22 Stratagene California Adaptive baseline algorithm for quantitative PCR
US7315376B2 (en) * 2005-01-07 2008-01-01 Advanced Molecular Systems, Llc Fluorescence detection system
US7630849B2 (en) * 2005-09-01 2009-12-08 Applied Biosystems, Llc Method of automated calibration and diagnosis of laboratory instruments
US8473216B2 (en) * 2006-11-30 2013-06-25 Fluidigm Corporation Method and program for performing baseline correction of amplification curves in a PCR experiment
WO2010119407A1 (en) * 2009-04-16 2010-10-21 Koninklijke Philips Electronics N.V. Methods for nucleic acid quantification
US8754890B2 (en) * 2009-07-31 2014-06-17 Oracle International Corporation Graphical interface with data presence indicators
WO2011127429A2 (en) * 2010-04-08 2011-10-13 Life Technologies Corporation Systems and methods for genotyping by angle configuration search
EP2556458B1 (en) * 2010-04-09 2020-06-03 Life Technologies Corporation VISUALIZATION TOOL FOR qPCR GENOTYPING DATA
SG184481A1 (en) * 2010-04-11 2012-11-29 Life Technologies Corp SYSTEMS AND METHODS FOR MODEL-BASED qPCR
CN106198656B (zh) * 2010-08-18 2018-12-11 生命科技股份有限公司 用于电化学检测装置的微孔的化学涂层
ES2596405T3 (es) * 2010-12-15 2017-01-09 Kemira Oyj Dispersión polimérica que contiene almidón acuoso para aplicaciones de papel
JP2014507031A (ja) * 2011-02-01 2014-03-20 ライフ テクノロジーズ コーポレーション タンパク質融解曲線データの分析のためのシステムおよび方法
KR20120103496A (ko) * 2011-03-09 2012-09-19 삼성테크윈 주식회사 실시간 중합효소 연쇄 반응에 있어서 표준 곡선 및 임계값을 획득하는 방법
EP2760585A2 (en) * 2011-09-30 2014-08-06 Life Technologies Corporation Systems and methods for biological analysis
EP2761027B1 (en) 2011-09-30 2017-10-25 Life Technologies Corporation Methods and systems for visualizing and evaluating data

Also Published As

Publication number Publication date
US20160239990A1 (en) 2016-08-18
JP6496417B2 (ja) 2019-04-03
CN107223249B (zh) 2021-06-18
CN107223249A (zh) 2017-09-29
RU2017131044A (ru) 2019-03-06
EP3254086A1 (en) 2017-12-13
KR102541746B1 (ko) 2023-06-09
RU2719346C2 (ru) 2020-04-17
EP3254086B1 (en) 2020-08-05
BR112017016932A2 (pt) 2018-04-03
BR112017016932B1 (pt) 2021-04-20
US10102653B2 (en) 2018-10-16
RU2017131044A3 (enExample) 2019-07-17
WO2016127086A1 (en) 2016-08-11
JP2018506974A (ja) 2018-03-15
KR20170135832A (ko) 2017-12-08
SG10202006588UA (en) 2020-08-28

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