JP6995751B2 - ガイド核酸を作製および使用するための方法および組成物 - Google Patents
ガイド核酸を作製および使用するための方法および組成物 Download PDFInfo
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- JP6995751B2 JP6995751B2 JP2018529124A JP2018529124A JP6995751B2 JP 6995751 B2 JP6995751 B2 JP 6995751B2 JP 2018529124 A JP2018529124 A JP 2018529124A JP 2018529124 A JP2018529124 A JP 2018529124A JP 6995751 B2 JP6995751 B2 JP 6995751B2
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- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1068—Template (nucleic acid) mediated chemical library synthesis, e.g. chemical and enzymatical DNA-templated organic molecule synthesis, libraries prepared by non ribosomal polypeptide synthesis [NRPS], DNA/RNA-polymerase mediated polypeptide synthesis
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- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
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- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/115—Aptamers, i.e. nucleic acids binding a target molecule specifically and with high affinity without hybridising therewith ; Nucleic acids binding to non-nucleic acids, e.g. aptamers
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/62—DNA sequences coding for fusion proteins
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
- C12N2310/20—Type of nucleic acid involving clustered regularly interspaced short palindromic repeats [CRISPR]
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2320/00—Applications; Uses
- C12N2320/10—Applications; Uses in screening processes
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14141—Use of virus, viral particle or viral elements as a vector
- C12N2750/14143—Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2800/00—Nucleic acids vectors
- C12N2800/70—Vectors containing special elements for cloning, e.g. topoisomerase, adaptor sites
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- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Biomedical Technology (AREA)
- Organic Chemistry (AREA)
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- Biotechnology (AREA)
- Wood Science & Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
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- Medicinal Chemistry (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- Animal Behavior & Ethology (AREA)
- Pharmacology & Pharmacy (AREA)
- Epidemiology (AREA)
- Public Health (AREA)
- Veterinary Medicine (AREA)
- Crystallography & Structural Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Enzymes And Modification Thereof (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Priority Applications (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2021103316A JP2021141904A (ja) | 2015-12-07 | 2021-06-22 | ガイド核酸を作製および使用するための方法および組成物 |
| JP2024030061A JP2024051149A (ja) | 2015-12-07 | 2024-02-29 | ガイド核酸を作製および使用するための方法および組成物 |
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201562264262P | 2015-12-07 | 2015-12-07 | |
| US62/264,262 | 2015-12-07 | ||
| US201662298963P | 2016-02-23 | 2016-02-23 | |
| US62/298,963 | 2016-02-23 | ||
| PCT/US2016/065420 WO2017100343A1 (en) | 2015-12-07 | 2016-12-07 | Methods and compositions for the making and using of guide nucleic acids |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021103316A Division JP2021141904A (ja) | 2015-12-07 | 2021-06-22 | ガイド核酸を作製および使用するための方法および組成物 |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2018535689A JP2018535689A (ja) | 2018-12-06 |
| JP2018535689A5 JP2018535689A5 (enExample) | 2020-01-16 |
| JP6995751B2 true JP6995751B2 (ja) | 2022-02-04 |
Family
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Family Applications (3)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2018529124A Active JP6995751B2 (ja) | 2015-12-07 | 2016-12-07 | ガイド核酸を作製および使用するための方法および組成物 |
| JP2021103316A Withdrawn JP2021141904A (ja) | 2015-12-07 | 2021-06-22 | ガイド核酸を作製および使用するための方法および組成物 |
| JP2024030061A Pending JP2024051149A (ja) | 2015-12-07 | 2024-02-29 | ガイド核酸を作製および使用するための方法および組成物 |
Family Applications After (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021103316A Withdrawn JP2021141904A (ja) | 2015-12-07 | 2021-06-22 | ガイド核酸を作製および使用するための方法および組成物 |
| JP2024030061A Pending JP2024051149A (ja) | 2015-12-07 | 2024-02-29 | ガイド核酸を作製および使用するための方法および組成物 |
Country Status (8)
| Country | Link |
|---|---|
| US (3) | US10787662B2 (enExample) |
| EP (2) | EP3386550B1 (enExample) |
| JP (3) | JP6995751B2 (enExample) |
| CN (1) | CN109310784B (enExample) |
| AU (1) | AU2016365720B2 (enExample) |
| CA (1) | CA3006781A1 (enExample) |
| DK (1) | DK3386550T3 (enExample) |
| WO (1) | WO2017100343A1 (enExample) |
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| EP3386550B1 (en) | 2015-12-07 | 2021-01-20 | Arc Bio, LLC | Methods for the making and using of guide nucleic acids |
| US10017760B2 (en) | 2016-06-24 | 2018-07-10 | Inscripta, Inc. | Methods for generating barcoded combinatorial libraries |
| KR102551664B1 (ko) * | 2016-12-22 | 2023-07-05 | 인텔리아 테라퓨틱스, 인크. | 알파-1 항트립신 결핍을 치료하기 위한 조성물 및 방법 |
| EP3635114B1 (en) * | 2017-06-07 | 2024-11-06 | Arc Bio, LLC | Creation and use of guide nucleic acids |
| IT201700067084A1 (it) * | 2017-06-16 | 2018-12-16 | Univ Degli Studi Di Palermo | Metodo in vitro per l’arricchimento in sequenze genomiche bersaglio mediante sistema CRISPR-Cas |
| US9982279B1 (en) | 2017-06-23 | 2018-05-29 | Inscripta, Inc. | Nucleic acid-guided nucleases |
| US10011849B1 (en) | 2017-06-23 | 2018-07-03 | Inscripta, Inc. | Nucleic acid-guided nucleases |
| EP3640333A4 (en) * | 2017-07-14 | 2020-12-30 | Cure Genetics Co., Ltd | GENE EDITING SYSTEM AND GENE EDITING METHOD |
| US20210054404A1 (en) | 2017-08-22 | 2021-02-25 | Napigen, Inc. | Organelle genome modification using polynucleotide guided endonuclease |
| WO2019222545A1 (en) | 2018-05-16 | 2019-11-21 | Synthego Corporation | Methods and systems for guide rna design and use |
| CA3101648A1 (en) | 2018-06-07 | 2019-12-12 | Arc Bio, Llc | Compositions and methods for making guide nucleic acids |
| BR112021001546A2 (pt) * | 2018-07-31 | 2021-05-04 | Intellia Therapeutics, Inc. | composições e métodos para a edição de gene do hidroxiácido oxidase 1 (hao1) para o tratamento da hiperoxalúria primária tipo 1 (ph1) |
| KR102200109B1 (ko) * | 2018-09-12 | 2021-01-08 | 한국과학기술정보연구원 | 표적 서열 증폭용 올리고 뉴클레오타이드 및 이를 이용한 표적 서열의 증폭 방법 |
| CN113207299B (zh) | 2018-10-04 | 2024-10-29 | 阿克生物公司 | 用于管理下一代测序中的低样本输入的归一化对照 |
| EP3650559B1 (en) | 2018-11-08 | 2022-06-29 | Siemens Healthcare GmbH | Direct rna nanopore sequencing with help of a stem-loop polynucleotide |
| CA3127814C (en) | 2019-03-18 | 2024-05-14 | Regeneron Pharmaceuticals, Inc. | Crispr/cas dropout screening platform to reveal genetic vulnerabilities associated with tau aggregation |
| KR102695765B1 (ko) | 2019-03-18 | 2024-08-20 | 리제너론 파마슈티칼스 인코포레이티드 | 타우 시딩 또는 응집의 유전적 변형제를 식별하기 위한 CRISPR/Cas 스크리닝 플랫폼 |
| AU2020272770A1 (en) * | 2019-04-09 | 2021-10-28 | Arc Bio, Llc | Compositions and methods for nucleotide modification-based depletion |
| ES3034102T3 (en) | 2019-06-14 | 2025-08-13 | Regeneron Pharma | Models of tauopathy |
| CN114277447A (zh) * | 2021-12-21 | 2022-04-05 | 翌圣生物科技(上海)股份有限公司 | 靶序列随机sgRNA全覆盖组的制备方法 |
| CN114293264B (zh) * | 2021-12-21 | 2024-12-27 | 翌圣生物科技(上海)股份有限公司 | 酶法靶序列随机sgRNA文库的制备方法 |
| AU2022421244A1 (en) | 2021-12-22 | 2024-07-11 | Camp4 Therapeutics Corporation | Modulation of gene transcription using antisense oligonucleotides targeting regulatory rnas |
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| WO2025050015A1 (en) * | 2023-09-01 | 2025-03-06 | Script Biosciences, Inc. | Compositions and methods for targeted modification of msh3 |
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| EP3635114B1 (en) | 2017-06-07 | 2024-11-06 | Arc Bio, LLC | Creation and use of guide nucleic acids |
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2016
- 2016-12-07 EP EP16873782.3A patent/EP3386550B1/en active Active
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Patent Citations (3)
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|---|---|---|---|---|
| JP2012522489A (ja) | 2009-03-09 | 2012-09-27 | ニユー・イングランド・バイオレイブス・インコーポレイテツド | 酵素を使用するdnaにおけるランダム二本鎖切断 |
| WO2015050501A1 (en) | 2013-10-03 | 2015-04-09 | Agency For Science, Technology And Research | Amplification paralleled library enrichment |
| WO2015089473A1 (en) | 2013-12-12 | 2015-06-18 | The Broad Institute Inc. | Engineering of systems, methods and optimized guide compositions with new architectures for sequence manipulation |
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| Nature (2014) Vol.509, pp.487-491, METHODS, Extended Data Figure 1-10 |
| Nature Biotechnology (2014) Vol.32, No.3, pp.267-273, ONLINE METHODS |
| Nature Communications (2015) Vol.6, No.8083, pp.1-7 |
| Scientific Reports (2015) Vol.5, No.14987, pp.1-10 |
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| JP2018535689A (ja) | 2018-12-06 |
| CA3006781A1 (en) | 2017-06-15 |
| US10787662B2 (en) | 2020-09-29 |
| AU2016365720A1 (en) | 2018-06-14 |
| WO2017100343A1 (en) | 2017-06-15 |
| JP2021141904A (ja) | 2021-09-24 |
| EP3386550A1 (en) | 2018-10-17 |
| US20250230432A1 (en) | 2025-07-17 |
| CN109310784B (zh) | 2022-08-19 |
| EP3386550B1 (en) | 2021-01-20 |
| US20210207130A1 (en) | 2021-07-08 |
| CN109310784A (zh) | 2019-02-05 |
| EP3871695A1 (en) | 2021-09-01 |
| US20190270984A1 (en) | 2019-09-05 |
| EP3386550A4 (en) | 2019-09-18 |
| JP2024051149A (ja) | 2024-04-10 |
| DK3386550T3 (da) | 2021-04-26 |
| AU2016365720B2 (en) | 2020-11-26 |
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