JP6018092B2 - 回転依存転写配列決定システムおよび使用方法 - Google Patents

回転依存転写配列決定システムおよび使用方法 Download PDF

Info

Publication number
JP6018092B2
JP6018092B2 JP2013555562A JP2013555562A JP6018092B2 JP 6018092 B2 JP6018092 B2 JP 6018092B2 JP 2013555562 A JP2013555562 A JP 2013555562A JP 2013555562 A JP2013555562 A JP 2013555562A JP 6018092 B2 JP6018092 B2 JP 6018092B2
Authority
JP
Japan
Prior art keywords
nucleic acid
rotation
tag
sequencing
acid molecule
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
JP2013555562A
Other languages
English (en)
Japanese (ja)
Other versions
JP2014506485A5 (enExample
JP2014506485A (ja
Inventor
テオフィロス コツェログロー
テオフィロス コツェログロー
Original Assignee
イブ バイオメディカル インコーポレイテッド
イブ バイオメディカル インコーポレイテッド
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by イブ バイオメディカル インコーポレイテッド, イブ バイオメディカル インコーポレイテッド filed Critical イブ バイオメディカル インコーポレイテッド
Publication of JP2014506485A publication Critical patent/JP2014506485A/ja
Publication of JP2014506485A5 publication Critical patent/JP2014506485A5/ja
Application granted granted Critical
Publication of JP6018092B2 publication Critical patent/JP6018092B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Saccharide Compounds (AREA)
  • Pyrane Compounds (AREA)
JP2013555562A 2011-02-23 2012-02-23 回転依存転写配列決定システムおよび使用方法 Expired - Fee Related JP6018092B2 (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201161463850P 2011-02-23 2011-02-23
US61/463,850 2011-02-23
US201161574270P 2011-07-30 2011-07-30
US61/574,270 2011-07-30
PCT/US2012/026339 WO2012116191A1 (en) 2011-02-23 2012-02-23 Rotation-dependent transcriptional sequencing systems and methods of using

Publications (3)

Publication Number Publication Date
JP2014506485A JP2014506485A (ja) 2014-03-17
JP2014506485A5 JP2014506485A5 (enExample) 2015-04-09
JP6018092B2 true JP6018092B2 (ja) 2016-11-02

Family

ID=45852700

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2013555562A Expired - Fee Related JP6018092B2 (ja) 2011-02-23 2012-02-23 回転依存転写配列決定システムおよび使用方法

Country Status (9)

Country Link
US (2) US8574840B2 (enExample)
EP (1) EP2678444B1 (enExample)
JP (1) JP6018092B2 (enExample)
KR (1) KR101924665B1 (enExample)
CN (1) CN103534357B (enExample)
AU (1) AU2012220546B2 (enExample)
CA (1) CA2827880A1 (enExample)
RU (1) RU2636460C2 (enExample)
WO (1) WO2012116191A1 (enExample)

Families Citing this family (28)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8775454B2 (en) 2008-07-29 2014-07-08 James L. Geer Phone assisted ‘photographic memory’
US9128981B1 (en) 2008-07-29 2015-09-08 James L. Geer Phone assisted ‘photographic memory’
JP6018092B2 (ja) 2011-02-23 2016-11-02 イブ バイオメディカル インコーポレイテッド 回転依存転写配列決定システムおよび使用方法
AU2014218911B2 (en) * 2013-02-20 2018-07-12 Eve Biomedical, Inc. Methods and compositions for nanostructure-based nucleic acid sequencing
US20160309068A1 (en) * 2014-01-06 2016-10-20 The Regents Of The University Of California Spatial frequency domain imaging using custom patterns
DK3460075T3 (da) 2014-07-15 2021-02-01 Illumina Inc Biokemisk aktiveret elektronisk anordning
SG11201708867UA (en) * 2015-04-30 2017-11-29 Curevac Ag Immobilized poly(n)polymerase
CN106991224A (zh) * 2017-03-27 2017-07-28 蔡彤� 一种芯片引线键合定位的建模方法及系统
US10344328B2 (en) 2017-11-17 2019-07-09 Ultima Genomics, Inc. Methods for biological sample processing and analysis
US11499962B2 (en) 2017-11-17 2022-11-15 Ultima Genomics, Inc. Methods and systems for analyte detection and analysis
US10957187B2 (en) * 2017-12-21 2021-03-23 Lumileds Llc Road lighting
US11798406B2 (en) * 2018-03-21 2023-10-24 Lumileds Llc Road lighting
US10704094B1 (en) 2018-11-14 2020-07-07 Element Biosciences, Inc. Multipart reagents having increased avidity for polymerase binding
US10512911B1 (en) 2018-12-07 2019-12-24 Ultima Genomics, Inc. Implementing barriers for controlled environments during sample processing and detection
US12239980B2 (en) 2018-12-07 2025-03-04 Ultima Genomics, Inc. Implementing barriers for controlled environments during sample processing and detection
US10852518B1 (en) 2019-03-14 2020-12-01 Ultima Genomics, Inc. Methods, devices, and systems for analyte detection and analysis
US10900078B2 (en) 2019-03-14 2021-01-26 Ultima Genomics, Inc. Methods, devices, and systems for analyte detection and analysis
US10830703B1 (en) 2019-03-14 2020-11-10 Ultima Genomics, Inc. Methods, devices, and systems for analyte detection and analysis
US11118223B2 (en) 2019-03-14 2021-09-14 Ultima Genomics, Inc. Methods, devices, and systems for analyte detection and analysis
US11609208B2 (en) 2019-04-12 2023-03-21 Western Digital Technologies, Inc. Devices and methods for molecule detection based on thermal stabilities of magnetic nanoparticles
CN113905822B (zh) * 2019-04-12 2023-09-22 西部数据技术公司 使用磁传感器阵列边合成边核酸测序
US11327073B2 (en) 2019-04-12 2022-05-10 Western Digital Technologies, Inc. Thermal sensor array for molecule detection and related detection schemes
US11112468B2 (en) 2019-04-12 2021-09-07 Western Digital Technologies, Inc. Magnetoresistive sensor array for molecule detection and related detection schemes
CN110376171B (zh) * 2019-07-15 2021-11-19 上海理工大学 应用于dPCR检测仪的透射式荧光检测成像系统
US11208682B2 (en) 2019-09-13 2021-12-28 Western Digital Technologies, Inc. Enhanced optical detection for nucleic acid sequencing using thermally-dependent fluorophore tags
US11060138B1 (en) 2020-01-17 2021-07-13 Element Biosciences, Inc. Nucleic acid sequencing systems
CN116802267A (zh) * 2020-10-23 2023-09-22 斯宾德尔生物科技公司 用于rna合成的组合物和方法
IL310281A (en) 2021-07-21 2024-03-01 Element Biosciences Inc Optical systems for nucleic acid sequencing and methods thereof

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5693489A (en) 1984-03-30 1997-12-02 Associated Universities, Inc. Cloning and expression of the gene for bacteriophage T7 RNA polymerase
US6872816B1 (en) * 1996-01-24 2005-03-29 Third Wave Technologies, Inc. Nucleic acid detection kits
RU2143004C1 (ru) * 1993-09-27 1999-12-20 АРЧ Девелопмент Корпорейшн Способ определения последовательности нуклеиновой кислоты (варианты) и набор для использования при определении последовательности нуклеиновой кислоты
US6232075B1 (en) * 1998-12-14 2001-05-15 Li-Cor, Inc. Heterogeneous assay for pyrophosphate detection
US6982146B1 (en) * 1999-08-30 2006-01-03 The United States Of America As Represented By The Department Of Health And Human Services High speed parallel molecular nucleic acid sequencing
US6529240B2 (en) * 1999-11-18 2003-03-04 Agilent Technologies, Inc. Random access memory integrated with CMOS sensors
US6548264B1 (en) * 2000-05-17 2003-04-15 University Of Florida Coated nanoparticles
JP2008507952A (ja) * 2004-03-05 2008-03-21 リサーチ ファウンデーション オブ ステイト ユニヴァーシティー オブ ニューヨーク 情報依存性分子モーターとしてのｒｎａポリメラーゼの使用
US20070077575A1 (en) 2004-03-05 2007-04-05 Mcallister William T Use of rna polymerase as an information-dependent molecular motor
WO2007111924A2 (en) * 2006-03-23 2007-10-04 The Board Of Trustees Of The Leland Stanford Junior University Motion resolved molecular sequencing
AU2008331824B2 (en) * 2007-12-04 2014-07-24 Pacific Biosciences Of California, Inc. Alternate labeling strategies for single molecule sequencing
US8815576B2 (en) 2007-12-27 2014-08-26 Lawrence Livermore National Security, Llc. Chip-based sequencing nucleic acids
JP6018092B2 (ja) 2011-02-23 2016-11-02 イブ バイオメディカル インコーポレイテッド 回転依存転写配列決定システムおよび使用方法

Also Published As

Publication number Publication date
RU2636460C2 (ru) 2017-11-23
CA2827880A1 (en) 2012-08-30
US9657343B2 (en) 2017-05-23
CN103534357B (zh) 2016-05-18
CN103534357A (zh) 2014-01-22
EP2678444B1 (en) 2016-02-17
AU2012220546B2 (en) 2017-02-23
KR101924665B1 (ko) 2018-12-03
RU2013142965A (ru) 2015-03-27
EP2678444A1 (en) 2014-01-01
US8574840B2 (en) 2013-11-05
WO2012116191A1 (en) 2012-08-30
HK1187959A1 (zh) 2014-04-17
KR20140089308A (ko) 2014-07-14
US20140162275A1 (en) 2014-06-12
AU2012220546A1 (en) 2013-09-12
US20120214171A1 (en) 2012-08-23
JP2014506485A (ja) 2014-03-17

Similar Documents

Publication Publication Date Title
JP6018092B2 (ja) 回転依存転写配列決定システムおよび使用方法
ES3024383T3 (en) Generating capture probes for spatial analysis
CN116323974A (zh) 多路复用covid-19锁式测定
JP6894480B2 (ja) 単一細胞の迅速かつ正確な分注、視覚化及び解析のための方法
AU2014218911B2 (en) Methods and compositions for nanostructure-based nucleic acid sequencing
CN116194592A (zh) 流动池系统和装置
CN113939601A (zh) 用于核酸分析的多价结合组合物
JP2014506485A5 (enExample)
CN111148846A (zh) 在水凝胶中捕获离散生物单元并使其条码化的方法
JP2019054805A (ja) 核酸を配列決定する方法および装置
HK1187959B (en) Rotation-dependent transcriptional sequencing systems and methods of using
WO2011108344A1 (ja) 基板上に固定化された複数の核酸検体の識別方法及び装置

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20131029

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20150216

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20150216

RD04 Notification of resignation of power of attorney

Free format text: JAPANESE INTERMEDIATE CODE: A7424

Effective date: 20150603

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20160210

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20160831

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20160929

R150 Certificate of patent or registration of utility model

Ref document number: 6018092

Country of ref document: JP

Free format text: JAPANESE INTERMEDIATE CODE: R150

LAPS Cancellation because of no payment of annual fees