JP4446746B2 - ポリヌクレオチドの並行配列決定のための一定長シグネチャー - Google Patents

ポリヌクレオチドの並行配列決定のための一定長シグネチャー Download PDF

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Publication number
JP4446746B2
JP4446746B2 JP2003587952A JP2003587952A JP4446746B2 JP 4446746 B2 JP4446746 B2 JP 4446746B2 JP 2003587952 A JP2003587952 A JP 2003587952A JP 2003587952 A JP2003587952 A JP 2003587952A JP 4446746 B2 JP4446746 B2 JP 4446746B2
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signature
tag
adapter
cdna
library
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JP2003587952A
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Japanese (ja)
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JP2006506953A (ja
JP2006506953A5 (enExample
Inventor
アキム フィッシャー，
ホルガー ヒーミッシュ，
スティーブン ウィリアムズ，
シドニー ブレナー，
ロジャー ウォーカー，
エリック バーマス，
ロンディアン フー，
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Solexa Inc
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Solexa Inc
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1096—Processes for the isolation, preparation or purification of DNA or RNA cDNA Synthesis; Subtracted cDNA library construction, e.g. RT, RT-PCR
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Biomedical Technology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Plant Pathology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
JP2003587952A 2002-04-26 2003-04-25 ポリヌクレオチドの並行配列決定のための一定長シグネチャー Expired - Fee Related JP4446746B2 (ja)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US37578202P 2002-04-26 2002-04-26
PCT/US2003/013076 WO2003091416A2 (en) 2002-04-26 2003-04-25 Constant length signatures for parallel sequencing of polynucleotides

Publications (3)

Publication Number Publication Date
JP2006506953A JP2006506953A (ja) 2006-03-02
JP2006506953A5 JP2006506953A5 (enExample) 2010-01-21
JP4446746B2 true JP4446746B2 (ja) 2010-04-07

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JP2003587952A Expired - Fee Related JP4446746B2 (ja) 2002-04-26 2003-04-25 ポリヌクレオチドの並行配列決定のための一定長シグネチャー

Country Status (8)

Country Link
US (1) US20040002104A1 (enExample)
EP (1) EP1497465B1 (enExample)
JP (1) JP4446746B2 (enExample)
AT (1) ATE423224T1 (enExample)
AU (1) AU2003234255A1 (enExample)
CA (1) CA2482425A1 (enExample)
DE (1) DE60326224D1 (enExample)
WO (1) WO2003091416A2 (enExample)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1523554A2 (en) * 2002-06-12 2005-04-20 Riken Method of utilizing the 5' end of transcribed nucleic acid regions for cloning and analysis
KR101128320B1 (ko) 2003-05-23 2012-04-12 넥타르 테라퓨틱스 아미도카르보네이트 연결기를 갖는 ｐｅｇ 유도체
US7947261B2 (en) 2003-05-23 2011-05-24 Nektar Therapeutics Conjugates formed from polymer derivatives having particular atom arrangements
EP1723260A4 (en) * 2004-02-17 2008-05-28 Dana Farber Cancer Inst Inc REPRESENTATION OF NUCLEIC ACID USING COLD PRODUCTS OF TYPE IIB RESTRICTION ENDONUCLEASE
EP1582599A1 (en) * 2004-03-31 2005-10-05 Takara Bio Inc. Method for purifying microbeads
WO2006003721A1 (en) * 2004-07-02 2006-01-12 Kabushiki Kaisha Dnaform Method for preparing sequence tags
EP2395113A1 (en) 2007-06-29 2011-12-14 Population Genetics Technologies Ltd. Methods and compositions for isolating nucleic acid sequence variants
CN109153698B (zh) * 2016-04-27 2022-04-05 生物辐射实验室股份有限公司 miRNA转录组方法和组合物
CN109477142B (zh) * 2016-07-18 2022-03-22 豪夫迈·罗氏有限公司 不对称模板和核酸测序的不对称方法
CN108410856A (zh) * 2018-03-29 2018-08-17 武汉光谷创赢生物技术开发有限公司 一种全长cDNA合成方法及其测序文库的构建

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5093245A (en) * 1988-01-26 1992-03-03 Applied Biosystems Labeling by simultaneous ligation and restriction
US6107023A (en) * 1988-06-17 2000-08-22 Genelabs Technologies, Inc. DNA amplification and subtraction techniques
CA2036946C (en) * 1990-04-06 2001-10-16 Kenneth V. Deugau Indexing linkers
US5710000A (en) * 1994-09-16 1998-01-20 Affymetrix, Inc. Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping
US6013445A (en) * 1996-06-06 2000-01-11 Lynx Therapeutics, Inc. Massively parallel signature sequencing by ligation of encoded adaptors
US5604097A (en) * 1994-10-13 1997-02-18 Spectragen, Inc. Methods for sorting polynucleotides using oligonucleotide tags
US5629179A (en) * 1995-03-17 1997-05-13 Novagen, Inc. Method and kit for making CDNA library
US5866330A (en) * 1995-09-12 1999-02-02 The Johns Hopkins University School Of Medicine Method for serial analysis of gene expression
US5695937A (en) * 1995-09-12 1997-12-09 The Johns Hopkins University School Of Medicine Method for serial analysis of gene expression
US6461814B1 (en) * 1997-01-15 2002-10-08 Dominic G. Spinella Method of identifying gene transcription patterns
US6232067B1 (en) * 1998-08-17 2001-05-15 The Perkin-Elmer Corporation Adapter directed expression analysis
EP1206577B1 (en) * 1999-08-13 2006-03-01 Yale University Binary encoded sequence tags
US6274320B1 (en) * 1999-09-16 2001-08-14 Curagen Corporation Method of sequencing a nucleic acid

Also Published As

Publication number Publication date
ATE423224T1 (de) 2009-03-15
EP1497465B1 (en) 2009-02-18
AU2003234255A1 (en) 2003-11-10
WO2003091416A3 (en) 2004-07-01
WO2003091416A2 (en) 2003-11-06
EP1497465A4 (en) 2005-06-08
CA2482425A1 (en) 2003-11-06
JP2006506953A (ja) 2006-03-02
EP1497465A2 (en) 2005-01-19
US20040002104A1 (en) 2004-01-01
DE60326224D1 (de) 2009-04-02

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