JP2019531730A - 細菌群の関係決定及び他のハイスループット微生物学適用高分解能システム、キット、装置、並びに方法 - Google Patents

細菌群の関係決定及び他のハイスループット微生物学適用高分解能システム、キット、装置、並びに方法 Download PDF

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JP2019531730A
JP2019531730A JP2019516965A JP2019516965A JP2019531730A JP 2019531730 A JP2019531730 A JP 2019531730A JP 2019516965 A JP2019516965 A JP 2019516965A JP 2019516965 A JP2019516965 A JP 2019516965A JP 2019531730 A JP2019531730 A JP 2019531730A
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microwells
microwell
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cells
microfabricated device
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クリスティー，ピーター
ホロック，アレクサンダー
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ジェネラル オートメーション ラボ テクノロジーズ インコーポレイテッド
ジェネラル オートメーション ラボ テクノロジーズ インコーポレイテッド
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    • C—CHEMISTRY; METALLURGY
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    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
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    • B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
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    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
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    • B01L3/508—Rigid containers without fluid transport within
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    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
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    • C—CHEMISTRY; METALLURGY
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    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
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    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00277—Apparatus
    • B01J2219/00279—Features relating to reactor vessels
    • B01J2219/00306—Reactor vessels in a multiple arrangement
    • B01J2219/00313—Reactor vessels in a multiple arrangement the reactor vessels being formed by arrays of wells in blocks
    • B01J2219/00315—Microtiter plates
    • B01J2219/00317—Microwell devices, i.e. having large numbers of wells
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00718—Type of compounds synthesised
    • B01J2219/0072—Organic compounds
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    • B01J2219/00743—Cells
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    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/02—Adapting objects or devices to another
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    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
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    • B01L2200/0689—Sealing
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    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/14—Process control and prevention of errors
    • B01L2200/141—Preventing contamination, tampering
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
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    • B01L2300/021—Identification, e.g. bar codes
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/06—Auxiliary integrated devices, integrated components
    • B01L2300/0627—Sensor or part of a sensor is integrated
    • B01L2300/0636—Integrated biosensor, microarrays
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/06—Auxiliary integrated devices, integrated components
    • B01L2300/0681—Filter
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0809—Geometry, shape and general structure rectangular shaped
    • B01L2300/0829—Multi-well plates; Microtitration plates
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0893—Geometry, shape and general structure having a very large number of wells, microfabricated wells
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/16—Surface properties and coatings
    • B01L2300/161—Control and use of surface tension forces, e.g. hydrophobic, hydrophilic
    • B01L2300/165—Specific details about hydrophobic, oleophobic surfaces
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    • B01L7/00—Heating or cooling apparatus; Heat insulating devices
    • B01L7/52—Heating or cooling apparatus; Heat insulating devices with provision for submitting samples to a predetermined sequence of different temperatures, e.g. for treating nucleic acid samples
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B20/00—Methods specially adapted for identifying library members
    • C40B20/02—Identifying library members by their fixed physical location on a support or substrate

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Clinical Laboratory Science (AREA)
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  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Hematology (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2019516965A 2016-09-28 2017-09-28 細菌群の関係決定及び他のハイスループット微生物学適用高分解能システム、キット、装置、並びに方法 Pending JP2019531730A (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201662400841P 2016-09-28 2016-09-28
US62/400,841 2016-09-28
PCT/US2017/054108 WO2018064385A1 (en) 2016-09-28 2017-09-28 High resolution systems, kits, apparatus, and methods for bacterial community relationship determination and other high throughput microbiology applications

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JP2019531730A true JP2019531730A (ja) 2019-11-07
JP2019531730A5 JP2019531730A5 (https=) 2020-11-12

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EP (1) EP3519096A4 (https=)
JP (1) JP2019531730A (https=)
CN (1) CN109843435A (https=)
AU (1) AU2017335897A1 (https=)
CA (1) CA3037631A1 (https=)
IL (1) IL265540A (https=)
WO (1) WO2018064385A1 (https=)

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2021241721A1 (ja) * 2020-05-29 2021-12-02 国立研究開発法人理化学研究所 細胞集団の処理方法および細胞集団に含まれる遺伝子の分析方法
WO2024135694A1 (ja) * 2022-12-23 2024-06-27 ペプチドリーム株式会社 Ｐｃｒを用いたｄｎａの増幅方法

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JP2022535300A (ja) * 2019-06-07 2022-08-05 ハニカム・バイオテクノロジーズ・インコーポレーテッド 生物学的試料の収集、保存、及び分析のための試料容器カセット
CN111483096B (zh) * 2019-12-10 2022-04-08 中国科学院亚热带农业生态研究所 根际通道微流控芯片及其胶体块和一种制造胶体块的模具
EP3939699A1 (en) * 2020-07-17 2022-01-19 Biomillenia SAS Growth modulation
CN115197840B (zh) * 2022-08-17 2025-08-08 厦门大学 一种基于数字微流控技术的单细菌基因组测序方法

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US20050014155A1 (en) * 2001-11-16 2005-01-20 Xu Wilson C High-density cell microarrays for parallel functional determinations
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JP2001522242A (ja) * 1997-04-09 2001-11-13 ミネソタ・マイニング・アンド・マニュファクチャリング・カンパニー 生物試料液体を微容量に分割するための方法と装置
US20050014155A1 (en) * 2001-11-16 2005-01-20 Xu Wilson C High-density cell microarrays for parallel functional determinations
WO2005090549A1 (ja) * 2004-03-19 2005-09-29 Genomidea Inc. 細胞培養用マイクロウェル
JP2016525355A (ja) * 2013-07-21 2016-08-25 フール・バイオーム，インコーポレーテッド マイクロバイオームの特性解明、モニタリング、および処置のための方法およびシステム
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Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2021241721A1 (ja) * 2020-05-29 2021-12-02 国立研究開発法人理化学研究所 細胞集団の処理方法および細胞集団に含まれる遺伝子の分析方法
WO2024135694A1 (ja) * 2022-12-23 2024-06-27 ペプチドリーム株式会社 Ｐｃｒを用いたｄｎａの増幅方法

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IL265540A (en) 2019-05-30
WO2018064385A1 (en) 2018-04-05
AU2017335897A1 (en) 2019-04-04
CA3037631A1 (en) 2018-04-05
CN109843435A (zh) 2019-06-04
EP3519096A1 (en) 2019-08-07
EP3519096A4 (en) 2020-06-17

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