JP2003501069A5 - - Google Patents
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- Publication number
- JP2003501069A5 JP2003501069A5 JP2001501647A JP2001501647A JP2003501069A5 JP 2003501069 A5 JP2003501069 A5 JP 2003501069A5 JP 2001501647 A JP2001501647 A JP 2001501647A JP 2001501647 A JP2001501647 A JP 2001501647A JP 2003501069 A5 JP2003501069 A5 JP 2003501069A5
- Authority
- JP
- Japan
- Prior art keywords
- oligonucleotide
- recognition sequence
- oligonucleotides
- library
- type iis
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 108091034117 Oligonucleotide Proteins 0.000 description 43
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 19
- 238000000034 method Methods 0.000 description 17
- 108091008146 restriction endonucleases Proteins 0.000 description 13
- 239000011159 matrix material Substances 0.000 description 10
- 150000007523 nucleic acids Chemical group 0.000 description 7
- 239000007787 solid Substances 0.000 description 7
- 239000002773 nucleotide Substances 0.000 description 6
- 125000003729 nucleotide group Chemical group 0.000 description 6
- 108090000790 Enzymes Proteins 0.000 description 5
- 102000004190 Enzymes Human genes 0.000 description 5
- 108020004707 nucleic acids Proteins 0.000 description 5
- 102000039446 nucleic acids Human genes 0.000 description 5
- 238000003776 cleavage reaction Methods 0.000 description 4
- 230000008878 coupling Effects 0.000 description 4
- 238000010168 coupling process Methods 0.000 description 4
- 238000005859 coupling reaction Methods 0.000 description 4
- 230000004048 modification Effects 0.000 description 4
- 238000012986 modification Methods 0.000 description 4
- 239000000376 reactant Substances 0.000 description 4
- 239000011541 reaction mixture Substances 0.000 description 4
- 230000007017 scission Effects 0.000 description 4
- 230000000903 blocking effect Effects 0.000 description 3
- 238000006243 chemical reaction Methods 0.000 description 3
- YBJHBAHKTGYVGT-ZKWXMUAHSA-N (+)-Biotin Chemical group N1C(=O)N[C@@H]2[C@H](CCCCC(=O)O)SC[C@@H]21 YBJHBAHKTGYVGT-ZKWXMUAHSA-N 0.000 description 2
- 108091028043 Nucleic acid sequence Proteins 0.000 description 2
- -1 amino compound Chemical class 0.000 description 2
- 239000011324 bead Substances 0.000 description 2
- 102000053642 Catalytic RNA Human genes 0.000 description 1
- 108090000994 Catalytic RNA Proteins 0.000 description 1
- 108020004414 DNA Proteins 0.000 description 1
- 238000000018 DNA microarray Methods 0.000 description 1
- 108060002716 Exonuclease Proteins 0.000 description 1
- 102000004160 Phosphoric Monoester Hydrolases Human genes 0.000 description 1
- 108090000608 Phosphoric Monoester Hydrolases Proteins 0.000 description 1
- 239000004793 Polystyrene Substances 0.000 description 1
- 108010090804 Streptavidin Proteins 0.000 description 1
- 108020005202 Viral DNA Proteins 0.000 description 1
- 210000004507 artificial chromosome Anatomy 0.000 description 1
- 229960002685 biotin Drugs 0.000 description 1
- 235000020958 biotin Nutrition 0.000 description 1
- 239000011616 biotin Substances 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 230000000295 complement effect Effects 0.000 description 1
- SHIBSTMRCDJXLN-KCZCNTNESA-N digoxigenin Chemical group C1([C@@H]2[C@@]3([C@@](CC2)(O)[C@H]2[C@@H]([C@@]4(C)CC[C@H](O)C[C@H]4CC2)C[C@H]3O)C)=CC(=O)OC1 SHIBSTMRCDJXLN-KCZCNTNESA-N 0.000 description 1
- 102000013165 exonuclease Human genes 0.000 description 1
- MHMNJMPURVTYEJ-UHFFFAOYSA-N fluorescein-5-isothiocyanate Chemical group O1C(=O)C2=CC(N=C=S)=CC=C2C21C1=CC=C(O)C=C1OC1=CC(O)=CC=C21 MHMNJMPURVTYEJ-UHFFFAOYSA-N 0.000 description 1
- 239000011521 glass Substances 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 239000013600 plasmid vector Substances 0.000 description 1
- 229920002223 polystyrene Polymers 0.000 description 1
- 108091092562 ribozyme Proteins 0.000 description 1
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE19925862.7 | 1999-06-07 | ||
| DE19925862A DE19925862A1 (de) | 1999-06-07 | 1999-06-07 | Verfahren zur Synthese von DNA-Fragmenten |
| PCT/DE2000/001863 WO2000075368A2 (de) | 1999-06-07 | 2000-06-07 | Verfahren zur synthese von dna-fragmenten |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2003501069A JP2003501069A (ja) | 2003-01-14 |
| JP2003501069A5 true JP2003501069A5 (https=) | 2007-07-19 |
| JP4756805B2 JP4756805B2 (ja) | 2011-08-24 |
Family
ID=7910391
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2001501647A Expired - Lifetime JP4756805B2 (ja) | 1999-06-07 | 2000-06-07 | Ｄｎａ断片の合成法 |
Country Status (7)
| Country | Link |
|---|---|
| EP (1) | EP1181395B1 (https=) |
| JP (1) | JP4756805B2 (https=) |
| AT (1) | ATE323179T1 (https=) |
| DE (3) | DE19925862A1 (https=) |
| DK (1) | DK1181395T3 (https=) |
| ES (1) | ES2262524T3 (https=) |
| WO (1) | WO2000075368A2 (https=) |
Families Citing this family (35)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6670127B2 (en) * | 1997-09-16 | 2003-12-30 | Egea Biosciences, Inc. | Method for assembly of a polynucleotide encoding a target polypeptide |
| RU2178844C1 (ru) * | 2000-09-21 | 2002-01-27 | Дочернее предприятие "НЕКСУС - Производственно-коммерческая компания" | Карданный шарнир |
| EP1205548A1 (en) * | 2000-11-09 | 2002-05-15 | Kabushiki Kaisha Toyota Chuo Kenkyusho | Methods and apparatus for successively ligating double-stranded DNA molecules on a solid phase |
| US6849404B2 (en) * | 2001-05-07 | 2005-02-01 | Bioneer Corporation | Polymerase chain reaction of DNA of which base sequence is completely unidentified |
| KR100758610B1 (ko) | 2001-05-07 | 2007-09-13 | (주)바이오니아 | 염기서열이 전혀 알려지지 아니한 디옥시리보핵산의선택적 증폭 방법 |
| DE10156329A1 (de) * | 2001-07-17 | 2003-02-06 | Frieder Breitling | Verfahren und Anordnung zum Anbringen von in Transportmittel immobilisierten Substanzen sowie Monomerpartikel |
| EP1314783B1 (de) * | 2001-11-22 | 2008-11-19 | Sloning BioTechnology GmbH | Nukleinsäure-Linker und deren Verwendung in der Gensynthese |
| US7563600B2 (en) | 2002-09-12 | 2009-07-21 | Combimatrix Corporation | Microarray synthesis and assembly of gene-length polynucleotides |
| ES2310197T3 (es) | 2002-10-18 | 2009-01-01 | Sloning Biotechnology Gmbh | Metodo para la preparacion de moleculas de acido nucleico. |
| FR2852605B1 (fr) * | 2003-03-18 | 2012-11-30 | Commissariat Energie Atomique | Procede de preparation de fragments d'adn et ses applications |
| ES2353302T3 (es) * | 2004-01-23 | 2011-03-01 | Sloning Biotechnology Gmbh | Producción enzimática de novo de moléculas de ácido nucleico. |
| US8053191B2 (en) | 2006-08-31 | 2011-11-08 | Westend Asset Clearinghouse Company, Llc | Iterative nucleic acid assembly using activation of vector-encoded traits |
| US9115352B2 (en) | 2008-03-31 | 2015-08-25 | Sloning Biotechnology Gmbh | Method for the preparation of a nucleic acid library |
| AU2010291902A1 (en) | 2009-09-14 | 2012-04-05 | Dyax Corp. | Libraries of genetic packages comprising novel HC CDR3 designs |
| US9187777B2 (en) | 2010-05-28 | 2015-11-17 | Gen9, Inc. | Methods and devices for in situ nucleic acid synthesis |
| WO2012064975A1 (en) | 2010-11-12 | 2012-05-18 | Gen9, Inc. | Protein arrays and methods of using and making the same |
| CN103502448B (zh) | 2010-11-12 | 2017-03-29 | Gen9股份有限公司 | 核酸合成的方法和设备 |
| DE102010056289A1 (de) | 2010-12-24 | 2012-06-28 | Geneart Ag | Verfahren zur Herstellung von Leseraster-korrekten Fragment-Bibliotheken |
| JP6214530B2 (ja) | 2011-07-15 | 2017-10-18 | ザ ジェネラル ホスピタル コーポレイション | 転写活性化因子様エフェクターの組立て方法 |
| LT2944693T (lt) | 2011-08-26 | 2019-08-26 | Gen9, Inc. | Kompozicijos ir būdai, skirti nukleorūgščių didelio tikslumo sąrankai |
| CN102584955A (zh) * | 2011-12-31 | 2012-07-18 | 北京唯尚立德生物科技有限公司 | 一种转录激活子样效应因子的固相合成方法 |
| DE102012101347B4 (de) * | 2012-02-20 | 2014-01-16 | Markus Fuhrmann | Verfahren zur Herstellung einer Nukleinsäure- Bibliothek mit mindestens zwei benachbarten variablen Codon- Tripletts |
| US9150853B2 (en) | 2012-03-21 | 2015-10-06 | Gen9, Inc. | Methods for screening proteins using DNA encoded chemical libraries as templates for enzyme catalysis |
| CA2871505C (en) | 2012-04-24 | 2021-10-12 | Gen9, Inc. | Methods for sorting nucleic acids and multiplexed preparative in vitro cloning |
| US9890364B2 (en) | 2012-05-29 | 2018-02-13 | The General Hospital Corporation | TAL-Tet1 fusion proteins and methods of use thereof |
| IL236303B (en) | 2012-06-25 | 2022-07-01 | Gen9 Inc | Methods for high-throughput nucleic acid assembly and sequencing |
| EP3789405A1 (en) | 2012-10-12 | 2021-03-10 | The General Hospital Corporation | Transcription activator-like effector (tale) - lysine-specific demethylase 1 (lsd1) fusion proteins |
| EP2954042B1 (en) | 2013-02-07 | 2017-12-06 | The General Hospital Corporation | Tale transcriptional activators |
| US20170218416A1 (en) * | 2014-05-16 | 2017-08-03 | The Regents Of The University Of California | Compositions and methods for single-molecule construction of dna |
| GB2559117B (en) | 2017-01-19 | 2019-11-27 | Oxford Nanopore Tech Ltd | Double stranded polynucleotide synthesis method, kit and system |
| GB2566986A (en) | 2017-09-29 | 2019-04-03 | Evonetix Ltd | Error detection during hybridisation of target double-stranded nucleic acid |
| GB2574197B (en) | 2018-05-23 | 2022-01-05 | Oxford Nanopore Tech Ltd | Double stranded polynucleotide synthesis method and system. |
| GB201811811D0 (en) | 2018-07-19 | 2018-09-05 | Oxford Nanopore Tech Ltd | Method |
| EP4211254A4 (en) * | 2020-09-14 | 2024-09-18 | Mark S. Chee | METHODS AND COMPOSITIONS FOR NUCLEIC ACID ASSEMBLY |
| EP4330388A1 (en) * | 2021-04-26 | 2024-03-06 | Camena Bioscience Limited | Compositions and methods for phosphoramedite-free enzymatic synthesis of nucleic acids |
Family Cites Families (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU672969B2 (en) * | 1992-03-10 | 1996-10-24 | United States of America, as represented by The Secretary, Department of Health & Human Services, The | Exchangeable template reaction |
| DE4343591A1 (de) * | 1993-12-21 | 1995-06-22 | Evotec Biosystems Gmbh | Verfahren zum evolutiven Design und Synthese funktionaler Polymere auf der Basis von Formenelementen und Formencodes |
| DE19633427C2 (de) * | 1996-08-20 | 2001-10-04 | Hubert S Bernauer | Verfahren zur Synthese von Nukleinsäuremolekülen mit zumindest teilweise vorbestimmter Nukleotidsequenz |
| GB9618544D0 (en) * | 1996-09-05 | 1996-10-16 | Brax Genomics Ltd | Characterising DNA |
| DE19812103A1 (de) * | 1998-03-19 | 1999-09-23 | Bernauer Annette | Verfahren zur Synthese von Nucleinsäuremolekülen |
-
1999
- 1999-06-07 DE DE19925862A patent/DE19925862A1/de not_active Withdrawn
-
2000
- 2000-06-07 ES ES00945609T patent/ES2262524T3/es not_active Expired - Lifetime
- 2000-06-07 DK DK00945609T patent/DK1181395T3/da active
- 2000-06-07 AT AT00945609T patent/ATE323179T1/de active
- 2000-06-07 DE DE10081549T patent/DE10081549D2/de not_active Expired - Fee Related
- 2000-06-07 WO PCT/DE2000/001863 patent/WO2000075368A2/de not_active Ceased
- 2000-06-07 EP EP00945609A patent/EP1181395B1/de not_active Expired - Lifetime
- 2000-06-07 DE DE50012574T patent/DE50012574D1/de not_active Expired - Lifetime
- 2000-06-07 JP JP2001501647A patent/JP4756805B2/ja not_active Expired - Lifetime
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