CN112522258A - Recombinant cell with IL2RG gene and ADA gene jointly knocked out and application of recombinant cell in preparation of immunodeficient pig model - Google Patents

Recombinant cell with IL2RG gene and ADA gene jointly knocked out and application of recombinant cell in preparation of immunodeficient pig model Download PDF

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CN112522258A
CN112522258A CN202010971715.7A CN202010971715A CN112522258A CN 112522258 A CN112522258 A CN 112522258A CN 202010971715 A CN202010971715 A CN 202010971715A CN 112522258 A CN112522258 A CN 112522258A
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sgrna
il2rg
ada
plasmid
plasmid pkg
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牛冬
汪滔
马翔
曾为俊
王磊
程锐
赵泽英
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Nanjing Qizhen Genetic Engineering Co Ltd
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Abstract

The invention discloses a recombinant cell with IL2RG gene and ADA gene knockout combined and application thereof in preparation of an immunodeficiency pig model. The invention provides a recombinant plasmid containing sgRNAIL2RG‑g7And sgRNAADA‑g7The sgRNA combination is applied to the preparation of a kit. The invention also provides a sgRNA combination consisting of sgRNAIL2RG‑g7And sgRNAADA‑g7And (4) forming. The sgRNAIL2RG‑g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20; the sgRNAADA‑g7The target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20. The invention also protects the application of the sgRNA combination in the preparation of recombinant cells and the application in the preparation of immunodeficient animal models. The invention lays a solid foundation for the preparation of the severe immunodeficiency pig model and has great application value for the research and development of severe immunodeficiency medicaments.

Description

Recombinant cell with IL2RG gene and ADA gene jointly knocked out and application of recombinant cell in preparation of immunodeficient pig model
Technical Field
The invention belongs to the technical field of biology, and relates to a recombinant cell with IL2RG gene and ADA gene knockout combined and application thereof in preparation of an immunodeficiency pig model.
Background
Severe Combined Immunodeficiency (SCID) is the most severe phenotype in primary immunodeficiency diseases, and refers to the development, differentiation, proliferation, metabolism or dysfunction of T cells, B cells and NK cells simultaneously caused by genetic, developmental or infection. SCID disease in human infants was first reported by Glanzmann and Riniker in 1950. Worldwide, the neonatal incidence of SCID is about 1/50000, the disease is early in age, clinically significant, and high in mortality. Most SCIDs are due to abnormalities in immune-related genes, and the major genetic patterns of SCIDs include both X-linked recessive inheritance and autosomal recessive inheritance. The disease has certain regionality and consanguinity, and is mostly seen in male patients due to the characteristic of X-linked recessive inheritance. Currently, the therapeutic approaches aimed at SCID mainly include bone marrow or hematopoietic stem cell transplantation and gene therapy. Bone marrow or stem cell transplantation is the best strategy for treating SCID, but finding donors that fit the patient appropriately is rather difficult.
As a large animal, the pig is a meat-source animal which is mainly used by human for a long time, is easy to breed and feed in a large scale, has lower requirements on ethics, animal protection and the like, has the body size and the organ function similar to those of the human, and is an ideal human disease model animal. In addition, when studying the efficacy of bioactive macromolecules or cellular therapies, testing with xenobiotics can produce immune rejection, and thus, effective animal testing is not possible. While the problem of immunological rejection between species can be avoided by using severe combined immunodeficiency model animals. Therefore, the research of developing human SCID pig model for drug (especially bioactive molecule) screening, drug effect detection, disease pathology, gene and cell therapy and the like can provide effective experimental data for further clinical application and provide powerful experimental means for successfully treating human SCID diseases.
SCID caused by X-linked recessive inheritance is the most common type, and the pathogenic mutation is that IL2RG gene which codes IL-2R gamma chain is mutated, thereby leading to IL-2R gamma chain dysfunction. The IL-2R gamma chain is also called a common gamma chain (common gamma chain), and is a signal transduction molecule commonly used when a plurality of cytokine receptors involved in the regulation of the differentiation, development and maturation of immune cells, such as IL-2, IL-4 and IL-7, are bound to their corresponding ligands and then transduce signals into the immune cells. Thus, dysfunction of the common gamma chain results in dysfunction or dysplasia of immune cells, which triggers SCID.
SCID resulting from autosomal recessive inheritance. Defects in the gene ADA associated with purine nucleotidase in the enzyme associated with nucleotide metabolism lead to a large enrichment of the intracellular nucleotide metabolites dATP or dGTP, which have a selective toxic effect on lymphocytes, thus causing dysfunction, damage or death of lymphocytes and further triggering SCID.
Disclosure of Invention
The invention aims to provide a recombinant cell with IL2RG gene and ADA gene knockout combined and application thereof in preparing an immunodeficiency pig model.
The invention provides a recombinant plasmid containing sgRNAIL2RG-g7And sgRNAADA-g7The sgRNA combination is applied to the preparation of a kit.
The invention also provides application of a plasmid combination consisting of the plasmid pKG-T6gRNA (IL2RG-g7) and the plasmid pKG-T6gRNA (ADA-g7) in preparation of a kit. .
The invention also provides the application of the plasmid combination and the plasmid pKG-GE3 in the preparation of a kit. The plasmid combination consists of plasmid pKG-T6gRNA (IL2RG-g7) and plasmid pKG-T6gRNA (ADA-g 7).
The invention also provides a sgRNA combination which is prepared from the sgRNAsIL2RG-g7And sgRNAADA-g7And (4) forming.
The invention also provides a plasmid combination, which consists of the plasmid pKG-T6gRNA (IL2RG-g7) and the plasmid pKG-T6gRNA (ADA-g 7).
The invention also provides a kit comprising the sgRNA combination.
The invention also provides a kit comprising the plasmid combination. The kit also includes plasmid pKG-GE 3.
The invention also protects the application of the sgRNA combination in the preparation of a kit.
The invention also protects the application of the plasmid combination in the preparation of a kit.
The invention also protects the application of the plasmid combination and the plasmid pKG-GE3 in the preparation of a kit.
The use of any one of the above kits is (a) or (b): (a) preparing a recombinant cell; (b) and (4) preparing an immunodeficiency animal model. When the immunodeficiency animal model is prepared, the recombinant cell is prepared firstly, and then the recombinant cell is used as a donor cell to obtain a cloned animal by adopting a somatic cell cloning technology, namely the immunodeficiency animal model. The immunodeficient animal model can also be used for preparing an immunodeficient cell model, namely corresponding cells of the immunodeficient animal model are separated to be used as the immunodeficient cell model. The animal may specifically be a pig. The animal model is a pig model. The cell model is a pig cell model. The recombinant cell is a porcine recombinant cell. The transformed receptor cell of the recombinant cell is a porcine cell. The porcine cells may be porcine fibroblasts. The porcine cells may specifically be porcine primary fibroblasts. The pig can be specifically a Yuanjiang fragrant pig.
The invention also protects the application of any one of the sgRNA combinations or any one of the plasmid combinations or any one of the kits in preparation of recombinant cells. The recombinant cell is a porcine recombinant cell. The transformed receptor cell of the recombinant cell is a porcine cell. The porcine cells may be porcine fibroblasts. The porcine cells may specifically be porcine primary fibroblasts. The pig can be specifically a Yuanjiang fragrant pig.
The invention also protects the application of any one of the sgRNA combinations or any one of the plasmid combinations or any one of the kits in preparation of an immunodeficient animal model. When the method is applied, the recombinant cell is prepared firstly, and then the recombinant cell is used as a donor cell to obtain a cloned animal by adopting a somatic cell cloning technology, namely the immunodeficiency animal model. The immunodeficient animal model can also be used for preparing an immunodeficient cell model, namely corresponding cells of the immunodeficient animal model are separated to be used as the immunodeficient cell model. The animal model is a pig model. The cell model is a pig cell model. The animal may specifically be a pig. The recombinant cell is a porcine recombinant cell. The transformed receptor cell of the recombinant cell is a porcine cell. The porcine cells may be porcine fibroblasts. The porcine cells may specifically be porcine primary fibroblasts. The pig can be specifically a Yuanjiang fragrant pig.
The invention also provides a method for preparing recombinant cells, which comprises the following steps: the plasmid pKG-T6gRNA (IL2RG-g7), the plasmid pKG-T6gRNA (ADA-g7) and the plasmid pKG-GE3 were co-transfected into porcine cells to obtain recombinant cells in which both the IL2RG gene and the ADA gene were mutated. The porcine cells may be porcine fibroblasts. The porcine cells may specifically be porcine primary fibroblasts. The pig can be specifically a Yuanjiang fragrant pig.
The recombinant cell prepared by the method also belongs to the protection scope of the invention.
In particular, the recombinant cell may be any one of: the monoclonal cell strains numbered 7, 15, 19, 20, 21, 26, 28, 30, 31, 35, 49 in tables 1 to 2.
The invention also protects the application of the recombinant cell in the preparation of an immunodeficiency animal model. When preparing the immunodeficiency animal model, the recombinant cells are used as donor cells to obtain cloned animals by adopting a somatic cell cloning technology, namely the immunodeficiency animal model. The immunodeficient animal model can also be used for preparing an immunodeficient cell model, namely corresponding cells of the immunodeficient animal model are separated to be used as the immunodeficient cell model. The animal model is a pig model. The cell model is a pig cell model.
Any of the above recombinant cells is a cell deficient in both the IL2RG gene and the ADA gene.
Any one of the above recombinant cells is a recombinant cell in which both IL2RG gene and ADA gene are mutated. The mutation may be a heterozygous mutation (heterozygous mutant type corresponding to the genotype) or a homozygous mutation (biallelic same mutant type or biallelic different mutant type corresponding to the genotype).
The sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (IL2RG-g7)IL2RG-g7
The sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (ADA-g7)ADA-g7
sgRNAIL2RG-g7And (3) target point: 5'-TCCCTTCAGAGAATAGATAG-3' are provided.
sgRNAADA-g7And (3) target point: 5'-GGAGGGCGTGGTGTACGTGG-3' are provided.
sgRNAIL2RG-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20;
sgRNAADA-g7the target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20.
The sgRNAIL2RG-g7As shown in SEQ ID NO: shown at 12.
The sgRNAADA-g7As shown in SEQ ID NO: 22, respectively.
In particular. The plasmid pKG-T6gRNA (IL2RG-g7) is a sgRNA prepared by using a restriction enzyme BbsIIL2RG-g7The coding sequence of the target sequence binding region is inserted into a pKG-U6gRNA vector.
Specifically, the plasmid pKG-T6gRNA (ADA-g7) binds sgRNA with the aid of the restriction enzyme BbsIADA-g7The coding sequence of the target sequence binding region is inserted into a pKG-U6gRNA vector.
The plasmid pKG-GE3 has a specific fusion gene; the specific fusion gene encodes a specific fusion protein;
the specific fusion protein sequentially comprises the following elements from N end to C end: two Nuclear Localization Signals (NLS), Cas9 protein, two nuclear localization signals, self-splicing polypeptide P2A, fluorescent reporter protein, self-cleavage polypeptide T2A, resistance selection marker protein;
in plasmid pKG-GE3, the expression of the specific fusion gene is driven by the EF1a promoter;
in plasmid pKG-GE3, the specific fusion gene has downstream of it a WPRE sequence element, a 3' LTR sequence element and a bGH poly (A) signal sequence element.
The plasmid pKG-GE3 has the following elements in the following order: CMV enhancer, EF1a promoter, the specific fusion gene, WPRE sequence element, 3' LTR sequence element, bGH poly (A) signal sequence element.
In the specific fusion protein, two nuclear localization signals at the upstream of the Cas9 protein are SV40 nuclear localization signals, and two nuclear localization signals at the downstream of the Cas9 protein are nucleoplasmin nuclear localization signals.
In the specific fusion protein, the fluorescent reporter protein can be EGFP protein.
In the specific fusion protein, the resistance screening marker protein can be Puromycin protein.
The amino acid sequence of self-cleaving polypeptide P2A is "ATNFSLLKQAGDVEENPGP" (the cleavage site that occurs self-cleaves is between the first and second amino acid residues from the C-terminus).
The amino acid sequence of self-cleaving polypeptide T2A is "EGRGSLLTCGDVEENPGP" (the cleavage site that occurs self-cleaves is between the first and second amino acid residues from the C-terminus).
The specific fusion gene is specifically shown as SEQ ID NO: 2, nucleotide 911-6706.
The CMV enhancer is as set forth in SEQ ID NO: 2 at nucleotide 395-680.
The EF1a promoter is shown as SEQ ID NO: 2, nucleotide 682-890.
The WPRE sequence element is shown as SEQ ID NO: 2 at nucleotide 6722 and 7310.
The 3' LTR sequence element is shown in SEQ ID NO: nucleotide 7382-7615 in 2.
The bGH poly (a) signal sequence element is as set forth in SEQ ID NO: 2 as shown by nucleotide 7647-7871.
The plasmid pKG-GE3 is specifically shown in SEQ ID NO: 2, respectively.
In plasmid pKG-U6gRNA, the plasmid has the sequence of SEQ ID NO: 3, the 2280-position 2637 nucleotide.
The plasmid pKG-U6gRNA is specifically shown in SEQ ID NO: 3, respectively.
Porcine IL2RG gene information: encoding the interleaver 2 receiver subBunit gamma; is located on the X chromosome; GeneID 397156, Sus scrofa. The protein coded by the porcine IL2RG gene is shown as SEQ ID NO: 4, respectively. In the genome DNA, the porcine IL2RG gene has 9 exons, wherein the 4 th exon and the upstream and downstream 500bp sequences thereof are shown as SEQ ID NO: 5, respectively. The pig IL2RG gene has sgRNAIL2RG-g7The target gene of (1). The pig DRA gene is a gene with the sequence shown in SEQ ID NO: 5, or a fragment thereof.
Pig ADA gene information: encoding adenosine deaminase; is located on chromosome 17; GeneID 100625920, Sus scrofa. The protein coded by the pig ADA gene is shown as SEQ ID NO: shown at 15. In the genome DNA, the pig ADA gene has 12 exons, wherein the 4 th exon and the sequences of 500bp on the upstream and the downstream of the exon are shown as SEQ ID NO: shown at 16. Pig ADA gene with sgRNAADA-g7The target gene of (1). The pig ADA gene is a gene with the sequence shown in SEQ ID NO: 16, or a fragment thereof.
Any of the above-described immunodeficiency may specifically be severe immunodeficiency.
The invention can be used for obtaining the severe immunodeficiency pig model by a gene editing means, is used for researching drug screening, drug effect detection, disease pathology, gene therapy, cell therapy and the like, can provide effective experimental data for further clinical application, and lays a solid foundation for curing the severe immunodeficiency of human in the future.
Compared with the prior art, the invention has at least the following beneficial effects:
(1) the subject of the invention (pig) has better applicability than other animals (rats, mice, primates). At present, no serious immunodeficiency model of any large animal is successfully developed. Rodents such as rats and mice have great differences from humans in body types, organ sizes, physiology, pathology and the like, and cannot truly simulate normal physiological and pathological states of humans. Studies have shown that over 95% of drugs validated to be effective in large mice are not effective in human clinical trials. The large animals, primates, which are the animals most closely related to humans, are small in size, late in sexual maturity (mating starts at age 6-7), and are single-birth animals, and the population propagation rate is extremely slow, and the raising cost is high. In addition, primate cloning efficiency is low, difficulty is high, and cost is high. However, pigs, which are animals that have a close relationship with humans except primates, do not have the above-mentioned disadvantages as model animals, and have body types, body weights, organ sizes, and the like close to those of humans, and are very similar to those of humans in terms of anatomy, physiology, nutritional metabolism, disease pathogenesis, and the like. Meanwhile, the pigs have early sexual maturity (4-6 months), high reproductive capacity and multiple births, and can form a large group within 2-3 years. In addition, the cloning technology of the pig is very mature, and the cloning and feeding cost is much lower than that of a primate; and the resistance of the pig as a carnivorous animal for a long time in the aspects of animal protection, ethics and the like is relatively small when the pig is used as a disease model animal.
(2) The gene editing is carried out by adopting the cas9 high-efficiency expression vector modified by the invention, and the editing efficiency is obviously improved compared with that of the original vector.
(3) Gene editing is carried out on the Cas9 high-efficiency expression vector modified by the invention, the genotype of the obtained cell (homozygous mutation comprises double allele same mutation and double allele different mutation, heterozygous mutation or wild type) can be analyzed through the sequencing result of the target gene PCR product, and the probability of obtaining the homozygous mutation is 10-20%; in addition, the obtained homozygous mutant monoclonal cell strain is used for somatic cell nuclear transplantation to directly obtain a cloned pig containing a target gene homozygous mutation, and the homozygous mutation can be stably inherited.
The invention lays a solid foundation for the preparation of the severe immunodeficiency pig model and has great application value for the research and development of severe immunodeficiency medicaments.
Drawings
FIG. 1 is a schematic diagram of the structure of plasmid pX 330.
FIG. 2 is a schematic structural diagram of plasmid pKG-GE 3.
FIG. 3 is a schematic structural diagram of plasmid pKG-U6 gRNA.
FIG. 4 is a schematic diagram of insertion of a DNA molecule of about 20bp (target sequence binding region for transcription to form a gRNA) into a plasmid pKG-U6 gRNA.
FIG. 5 is an electrophoretogram of three sets of MSTN in step three of example 2.
FIG. 6 is an electrophoretogram of three sets of FNDC5 in step three of example 2.
FIG. 7 is an electrophoretogram obtained after PCR amplification of a primer pair consisting of IL2RG-GT-F4543/IL2RG-GT-R5180 using genomic DNA of 8 pigs as a template in step one of example 3.
FIG. 8 shows double-stranded DNA molecules having sticky ends in each of the three steps of example 3.
FIG. 9 is a graph of the sequencing peaks in step four of example 3.
FIG. 10 is an electrophoretogram obtained after PCR amplification using a primer set consisting of ADA-GT-F259/ADA-GT-R1005 and genomic DNA of 8 pigs as a template in step one of example 4.
FIG. 11 shows double-stranded DNA molecules having sticky ends in each of the three steps of example 4.
FIG. 12 is a graph of the sequencing peaks in step four of example 4.
FIG. 13 is a graph of the target gene sequencing peaks of a portion of the monoclonal cells in Table 1.
FIG. 14 is a graph of the target gene sequencing peaks of a portion of the monoclonal cells in Table 2.
Detailed Description
The present invention is described in further detail below with reference to specific embodiments, which are given for the purpose of illustration only and are not intended to limit the scope of the invention. The examples provided below serve as a guide for further modifications by a person skilled in the art and do not constitute a limitation of the invention in any way.
The experimental procedures in the following examples, unless otherwise indicated, are conventional and are carried out according to the techniques or conditions described in the literature in the field or according to the instructions of the products. Materials, reagents and the like used in the following examples are commercially available unless otherwise specified. Unless otherwise stated, the quantitative tests in the following examples were performed in triplicate, and the results were averaged. Complete culture broth (% by volume): 15% fetal bovine serum (Gibco) + 83% DMEM medium (Gibco) + 1% Penicilin-Streptomyces (Gibco) + 1% HEPES (Solarbio). Cell culture conditions: 37 ℃ and 5% CO2、5%O2The constant temperature incubator.
The 8 pigs in example 3 and example 4 were all fresh-born Jiangxiang pigs, with 4 females (named 1, 2, 3, 4, respectively) and 4 males (named A, B, C, D, respectively).
The method for preparing the primary pig fibroblast comprises the following steps: taking 0.5g of pig ear tissue, removing hairs, soaking for 30-40s by using 75% alcohol, washing for 5 times by using PBS (phosphate buffer solution) containing 5% (volume ratio) Penicillin-streptomycin (Gibco), and washing for one time by using the PBS; ② the tissue is cut into pieces by scissors, 5mL of 1% collagenase solution (Sigma) is adopted to digest for 1h at 37 ℃, then 500g is centrifuged for 5min, and the supernatant is discarded; thirdly, resuspending the precipitate with 1mL of complete culture solution, then paving the precipitate into a cell culture dish which contains 10mL of complete culture medium and is sealed by 0.2 percent gelatin (VWR) and has the diameter of 9cm, and culturing until the cell grows to be about 60 percent of the bottom of the dish; and fourthly, after the third step is finished, digesting and collecting the cells by adopting trypsin, and freezing and storing the cells by using a cell freezing medium (90% complete culture medium + 10% DMSO in volume ratio).
The porcine primary fibroblasts used in examples 2 to 5 were all obtained from the above-mentioned pig named 2 (female, blood group AO).
Example 1 preparation of plasmid
Plasmid pX330-U6-Chimeric _ BB-CBh-hSpCas9 was prepared as shown in SEQ ID NO: 1 is shown. Plasmid pX330-U6-Chimeric _ BB-CBh-hSpCas9, abbreviated as plasmid pX 330.
Plasmid pU6gRNA eEF1a-mNLS-hSpCas9-EGFP-PURO was prepared as shown in SEQ ID NO: 2, respectively. The plasmid pU6gRNA eEF1a-mNLS-hSpCas9-EGFP-PURO is called plasmid pKG-GE3 for short.
Plasmid pKG-U6gRNA was prepared as shown in SEQ ID NO: 3, respectively.
The plasmid pX330, the plasmid pKG-GE3 and the plasmid pKG-U6gRNA are all circular plasmids.
The structure of plasmid pX330 is schematically shown in FIG. 1. SEQ ID NO: 1, the 440-st-725 nucleotide constitutes the CMV enhancer, the 727-1208 th-1208 nucleotide constitutes the chicken beta-actin promoter, the 1304-st-1324 nucleotide encodes SV40 Nuclear Localization Signal (NLS), the 1325-st-5449 nucleotide encodes the Cas9 protein, and the 5450-st-5497 nucleotide encodes the nucleosplastin Nuclear Localization Signal (NLS).
The structure of plasmid pKG-GE3 is shown in FIG. 2. SEQ ID NO: 2, the 395-680 nucleotide constitutes a CMV enhancer, the 682-890 nucleotide constitutes an EF1a promoter, the 986-1006 nucleotide encodes a Nuclear Localization Signal (NLS), the 1016-1036 nucleotide encodes a Nuclear Localization Signal (NLS), the 1037-5161 nucleotide encodes a Cas9 protein, the 5162-5209 nucleotide encodes a Nuclear Localization Signal (NLS), the 5219-5266 nucleotide encodes a Nuclear Localization Signal (NLS), the 5276-5332 nucleotide encodes a self-splicing polypeptide P2A (the amino acid sequence of the self-splicing polypeptide P2A is "ATNFSLLKQAGDVEENPGP", the cleavage position occurring from the cleavage is between the first amino acid residue and the second amino acid residue from the C-terminal), the 5333-6046 nucleotide encodes an EGFP protein, the 526056-6109 nucleotide encodes a self-splicing polypeptide T2A (the amino acid sequence of the self-splicing polypeptide T2A is "EGRGSLLTCGDVEENPGP", between the first amino acid residue and the second amino acid residue from the C-terminal position of the cleavage site), nucleotides 6110-6703 encode Puromycin protein (Puro protein for short), nucleotides 6722-7310 constitute the WPRE sequence element, nucleotides 7382-7615 constitute the 3' LTR sequence element, and nucleotides 7647-7871 constitute the bGH poly (A) signal sequence element. SEQ ID NO: 2, 911-6706 form a fusion gene to express the fusion protein. Due to the presence of self-cleaving polypeptide P2A and self-cleaving polypeptide T2A, the fusion protein spontaneously forms the following three proteins: a protein with Cas9 protein, a protein with EGFP protein and a protein with Puro protein.
Compared with plasmid pX330, plasmid pKG-GE3 was mainly modified as follows: removing residual gRNA framework sequences (GTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTTT) to reduce interference; secondly, the original chicken beta-actin promoter is transformed into an EF1a promoter with higher expression activity, so that the protein expression capacity of the Cas9 gene is improved; ③ the nuclear localization signal coding gene (NLS) is added at the upstream and the downstream of the Cas9 gene, and the nuclear localization capability of the Cas9 protein is increased; the original plasmid does not have any eukaryotic cell screening marker, is not beneficial to screening and enriching of positive transformed cells, and is sequentially inserted with a P2A-EGFP-T2A-PURO coding gene at the downstream of the Cas9 gene to endow the vector with fluorescence and eukaryotic cell resistance screening capacity; inserting WPRE element and 3' LTR sequence element to strengthen the protein translating capacity of Cas9 gene.
The structure of plasmid pKG-U6gRNA is schematically shown in FIG. 3. SEQ ID NO: 3, the 2280-position 2539 nucleotide constitutes the hU6 promoter, and the 2558-position 2637 nucleotide is used for transcription to form a gRNA framework. When the recombinant gRNA is used, a DNA molecule (a target sequence binding region for forming gRNA through transcription) of about 20bp is inserted into a plasmid pKG-U6gRNA to form a recombinant plasmid, and the recombinant plasmid is transcribed in a cell to obtain the gRNA, wherein a schematic diagram is shown in figure 4.
Example 2 comparison of the Effect of plasmid pX330 and plasmid pKG-GE3
Two gRNA targets located in the MSTN gene were selected:
target of MSTN-gRNA 1: 5'-GCTGATTGTTGCTGGTCCCG-3', respectively;
target of MSTN-gRNA 2: 5'-TTTCCAGGCGAAGTTTACTG-3' are provided.
Two gRNA targets located at FNDC5 gene were selected:
target of FNDC5-gRNA 1: 5'-TGTACTCAGTGTCCTCCTCC-3', respectively;
target of FNDC5-gRNA 2: 5'-GCTCTTCAAGACGCCTCGCG-3' are provided.
The primers used to amplify the fragment containing the target were:
MSTN-F896:5’-TCTCTCAGACAGTGCAGGCATTA-3’;
MSTN-R1351:5’-CGTTTCCGTCGTAGCGTGATAAT-3’。
FNDC5-F209:5’-CAGTTCTCACTTGATGGCCTTGG-3’;
FNDC5-R718:5’-AGGGGTCTGGGGAGGAATGG-3’。
firstly, preparing recombinant plasmid
The plasmid pKG-U6gRNA was digested with the restriction enzyme BbsI, and the vector backbone (approximately 3kb linear large fragment) was recovered.
MSTN-1S and MSTN-1A are synthesized respectively, and then mixed and annealed to obtain double-stranded DNA molecules with cohesive ends. The double-stranded DNA molecule having the cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (MSTN-1).
MSTN-2S and MSTN-2A are synthesized respectively, and then mixed and annealed to obtain double-stranded DNA molecules with cohesive ends. The double-stranded DNA molecule with the cohesive end is connected with a vector framework to obtain a plasmid pKG-U6gRNA (MSTN-2).
FNDC5-1S and FNDC5-1A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends. The double-stranded DNA molecule having the cohesive ends was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (FNDC 5-1).
FNDC5-2S and FNDC5-2A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends. The double-stranded DNA molecule having the cohesive ends was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (FNDC 5-2).
MSTN-1S:5’-caccGCTGATTGTTGCTGGTCCCG-3’;
MSTN-1A:5’-aaacCGGGACCAGCAACAATCAGC-3’。
MSTN-2S:5’-caccgTTTCCAGGCGAAGTTTACTG-3’;
MSTN-2A:5’-aaacCAGTAAACTTCGCCTGGAAAc-3’。
FNDC5-1S:5’-caccgTGTACTCAGTGTCCTCCTCC-3’;
FNDC5-1A:5’-aaacGGAGGAGGACACTGAGTACAc-3’。
FNDC5-2S:5’-caccGCTCTTCAAGACGCCTCGCG-3’;
FNDC5-2A:5’-aaacCGCGAGGCGTCTTGAAGAGC-3’。
Secondly, the effect comparison of plasmid pX330 and plasmid pKG-GE3
1. Cotransfection
MSTN-B group: the plasmid pKG-U6gRNA (MSTN-1) and the plasmid pKG-U6gRNA (MSTN-2) were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (MSTN-1): 0.46. mu.g of plasmid pKG-U6gRNA (MSTN-2).
MSTN-330 group: the plasmid pKG-U6gRNA (MSTN-1), the plasmid pKG-U6gRNA (MSTN-2) and the plasmid pX330 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (MSTN-1): 0.46. mu.g of plasmid pKG-U6gRNA (MSTN-2): 1.08. mu.g of plasmid pX 330.
MSTN-KG group: the plasmid pKG-U6gRNA (MSTN-1), the plasmid pKG-U6gRNA (MSTN-2) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (MSTN-1): plasmid 0.46. mu.g pKG-U6gRNA (MSTN-2): 1.08. mu.g of plasmid pKG-GE 3.
FNDC 5-group B: the plasmid pKG-U6gRNA (FNDC5-1) and the plasmid pKG-U6gRNA (FNDC5-2) were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-1): 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-2).
FNDC5-330 group: the plasmid pKG-U6gRNA (FNDC5-1), the plasmid pKG-U6gRNA (FNDC5-2) and the plasmid pX330 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-1): 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-2): 1.08. mu.g of plasmid pX 330.
FNDC5-KG group: the plasmid pKG-U6gRNA (FNDC5-1), the plasmid pKG-U6gRNA (FNDC5-2) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-1): 0.46. mu.g of plasmid pKG-U6gRNA (FNDC 5-2): 1.08. mu.g of plasmid pKG-GE 3.
Co-transfection was performed by electroporation using a mammalian nuclear transfection kit (Neon kit, Thermofeisher) and a Neon TM transfection system electrotransfer instrument (parameters set at 1450V, 10ms, 3 pulses).
2. After step 1, the culture is carried out for 16 to 18 hours by using the complete culture solution, and then the culture is carried out by replacing the complete culture solution with a new one. The total time of incubation was 48 hours.
3. After completion of step 2, the cells were digested with trypsin and collected, genomic DNA was extracted, and PCR amplification was performed using a primer pair consisting of MSTN-F896 and MSTN-R1351 (three groups of MSTN), or a primer pair consisting of FNDC5-F209 and FNDC5-R718 (three groups of FNDC 5), followed by electrophoresis.
The results of three sets of MSTNs are shown in fig. 5.
The results of three sets of FNDC5 are shown in figure 6.
The gene deletion mutation efficiency of the MSTN-330 group is 27.6 percent, and the gene deletion mutation efficiency of the MSTN-KG group is 86.5 percent. The FNDC5-330 group gene deletion mutation efficiency is 18.6%, and the FNDC5-KG group gene deletion mutation efficiency is 81.7%. The results showed that the use of plasmid pKG-GE3 resulted in a significant improvement in gene editing efficiency compared to the use of plasmid pX 330.
Example 3 screening of target for IL2RG Gene knockout
First, IL2RG gene knockout preset target and adjacent genome sequence conservation analysis
Porcine IL2RG gene information: encoding the interleaver 2 receiver subBunit gamma; is located on the X chromosome; GeneID 397156, Sus scrofa. The protein coded by the porcine IL2RG gene is shown as SEQ ID NO: 4, respectively. In the genome DNA, the porcine IL2RG gene has 9 exons, wherein the 4 th exon and the upstream and downstream 500bp sequences thereof are shown as SEQ ID NO: 5, respectively.
The genomic DNA of 8 pigs were used as templates, PCR amplification was carried out using the primer pair IL2RG-GT-F4543/IL2RG-GT-R5180, and electrophoresis was carried out, as shown in FIG. 7. And recovering PCR amplification products, sequencing, and comparing the sequencing result with the IL2RG gene sequence in a public database for analysis. Based on the alignment, primers for detecting mutations were designed (the primers themselves avoid potential mutation sites). Primers designed to detect mutations were: IL2RG-nF33/IL2RG-nR 460.
IL2RG-GT-F4543:5’-ATATAGCACAGGGGAGGGAGGAA-3’;
IL2RG-GT-R5180:5’-AGGGTGCGAAGGGTCAGATTC-3’;
IL2RG-nF33:5’-CCCAGGCTTCCCACTATATTCTC-3’;
IL2RG-nR460:5’-CCATTGGATCCCTCACTTCTTCT-3’。
Secondly, screening target spots
And primarily screening a plurality of targets by screening NGG (avoiding possible mutation sites), and further screening 9 targets from the NGG through a preliminary experiment.
The 9 targets were as follows:
sgRNAIL2RG-g1and (3) target point: 5'-CCTGTAGTTTTAGCGTCTGT-3', respectively;
sgRNAIL2RG-g2and (3) target point: 5'-CAACAAATGTTTGGTAGAGG-3', respectively;
sgRNAIL2RG-g3and (3) target point: 5'-GATGATAAAGTCCAGGAGTG-3', respectively;
sgRNAIL2RG-g4and (3) target point: 5'-CTGGACTTTATCATCATTAG-3', respectively;
sgRNAIL2RG-g5and (3) target point: 5'-TTGTCCAGCTCCAGGACCCA-3', respectively;
sgRNAIL2RG-g6and (3) target point: 5'-GGCCACTATCTATTCTCTGA-3', respectively;
sgRNAIL2RG-g7and (3) target point: 5'-TCCCTTCAGAGAATAGATAG-3', respectively;
sgRNAIL2RG-g8and (3) target point: 5'-AACATTTGTTGTCCAGCTCC-3', respectively;
sgRNAIL2RG-g9and (3) target point: 5'-TGTCCAGCTCCAGGACCCAC-3' are provided.
Thirdly, preparing recombinant plasmid
The plasmid pKG-U6gRNA was digested with the restriction enzyme BbsI, and the vector backbone (approximately 3kb linear large fragment) was recovered.
IL2RG-g1S and IL2RG-g1A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8A). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 1). Plasmid pKG-U6gRNA (IL2RG-g1) expresses the nucleic acid sequence of SEQ ID NO: sgRNA shown in FIG. 6IL2RG-g1
SEQ ID NO:6:
CCUGUAGUUUUAGCGUCUGUguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g2S and IL2RG-g2A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8B). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 2). Plasmid pKG-U6gRNA (IL2RG-g2) expresses the nucleic acid sequence of SEQ ID NO: 7 sgRNAIL2RG-g2
SEQ ID NO:7:
CAACAAAUGUUUGGUAGAGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g3S and IL2RG-g3A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8C). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 3). Plasmid pKG-U6gRNA (IL2RG-g3) expresses the nucleic acid sequence of SEQ ID NO: sgRNA shown in FIG. 8IL2RG-g3
SEQ ID NO:8:
GAUGAUAAAGUCCAGGAGUGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g4S and IL2RG-g4A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8D). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 4). Plasmid pKG-U6gRNA (IL2RG-g4) expresses the nucleic acid sequence of SEQ ID NO: 9 sgRNAIL2RG-g4
SEQ ID NO:9:
CUGGACUUUAUCAUCAUUAGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g5S and IL2RG-g5A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8E). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 5). Plasmid pKG-U6gRNA (IL2RG-g5) expresses the nucleic acid sequence of SEQ ID NO: 10 sgRNAIL2RG-g5
SEQ ID NO:10:
UUGUCCAGCUCCAGGACCCAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g6S and IL2RG-g6A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8F). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 6). Plasmid pKG-U6gRNA (IL2RG-g6) expresses the nucleic acid sequence of SEQ ID NO: 11 sgRNAIL2RG-g6
SEQ ID NO:11:
GGCCACUAUCUAUUCUCUGAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-G7S and IL2RG-G7A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8G). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 7). Plasmid pKG-U6gRNA (IL2RG-g7) expresses the nucleic acid sequence of SEQ ID NO: 12 sgRNAIL2RG-g7
SEQ ID NO:12:
UCCCUUCAGAGAAUAGAUAGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g8S and IL2RG-g8A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8H). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 8). Plasmid pKG-U6gRNA (IL2RG-g8) expresses the nucleic acid sequence of SEQ ID NO: 13 sgRNAIL2RG-g8
SEQ ID NO:13:
AACAUUUGUUGUCCAGCUCCguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
IL2RG-g9S and IL2RG-g9A were synthesized separately, and then mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 8I). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain a plasmid pKG-U6gRNA (IL2RG-g 9). Plasmid pKG-U6gRNA (IL2RG-g9) expresses the nucleic acid sequence of SEQ ID NO: 14 sgRNAIL2RG-g9
SEQ ID NO:14:
UGUCCAGCUCCAGGACCCACguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
sgRNA-IL2RG-1S:5’-caccgCCTGTAGTTTTAGCGTCTGT-3’;
sgRNA-IL2RG-1A:5’-aaacACAGACGCTAAAACTACAGGc-3’。
sgRNA-IL2RG-2S:5’-caccgCAACAAATGTTTGGTAGAGG-3’;
sgRNA-IL2RG-2A:5’-aaacCCTCTACCAAACATTTGTTGc-3’。
sgRNA-IL2RG-3S:5’-caccGATGATAAAGTCCAGGAGTG-3’;
sgRNA-IL2RG-3A:5’-aaacCACTCCTGGACTTTATCATC-3’。
sgRNA-IL2RG-4S:5’-caccgCTGGACTTTATCATCATTAG-3’;
sgRNA-IL2RG-4A:5’-aaacCTAATGATGATAAAGTCCAGc-3’。
sgRNA-IL2RG-5S:5’-caccgTTGTCCAGCTCCAGGACCCA-3’;
sgRNA-IL2RG-5A:5’-aaacTGGGTCCTGGAGCTGGACAAc-3’。
sgRNA-IL2RG-6S:5’-caccgGGCCACTATCTATTCTCTGA-3’;
sgRNA-IL2RG-6A:5’-aaacTCAGAGAATAGATAGTGGCCc-3’。
sgRNA-IL2RG-7S:5’-caccgTCCCTTCAGAGAATAGATAG-3’;
sgRNA-IL2RG-7A:5’-aaacCTATCTATTCTCTGAAGGGAc-3’。
sgRNA-IL2RG-8S:5’-caccgAACATTTGTTGTCCAGCTCC-3’;
sgRNA-IL2RG-8A:5’-aaacGGAGCTGGACAACAAATGTTc-3’。
sgRNA-IL2RG-9S:5’-caccgTGTCCAGCTCCAGGACCCAC-3’;
sgRNA-IL2RG-9A:5’-aaacGTGGGTCCTGGAGCTGGACAc-3’。
The sgRNA-IL2RG-1S, sgRNA-IL2RG-1A, sgRNA-IL2RG-2S, sgRNA-IL2RG-2A, sgRNA-IL2RG-3S, sgRNA-IL2RG-3A, sgRNA-IL2RG-4S, sgRNA-IL2RG-4A, sgRNA-IL2RG-5S, sgRNA-IL2RG-5A, sgRNA-IL2RG-6S, sgRNA-IL2RG-6A, sgRNA-IL2RG-7S, sgRNA-IL2RG-7A, sgRNA-IL2RG-8S, sgRNA-IL2RG-8A, sgRNA-IL2RG-9S, sgRNA-IL2RG-9A are single-chain DNA molecules.
Four, comparison of editing efficiency of different target points
1. Cotransfection
A first group: plasmid pKG-U6gRNA (IL2RG-g1) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 1): 1.238 μ g of plasmid pKG-GE 3.
Second group: plasmid pKG-U6gRNA (IL2RG-g2) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 2): 1.238 μ g of plasmid pKG-GE 3.
Third group: plasmid pKG-U6gRNA (IL2RG-g3) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 3): 1.238 μ g of plasmid pKG-GE 3.
And a fourth group: plasmid pKG-U6gRNA (IL2RG-g4) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 4): 1.238 μ g of plasmid pKG-GE 3.
And a fifth group: plasmid pKG-U6gRNA (IL2RG-g5) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 5): 1.238 μ g of plasmid pKG-GE 3.
A sixth group: plasmid pKG-U6gRNA (IL2RG-g6) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 6): 1.238 μ g of plasmid pKG-GE 3.
A seventh group: plasmid pKG-U6gRNA (IL2RG-g7) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 7): 1.238 μ g of plasmid pKG-GE 3.
And an eighth group: plasmid pKG-U6gRNA (IL2RG-g8) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 8): 1.238 μ g of plasmid pKG-GE 3.
Ninth group: plasmid pKG-U6gRNA (IL2RG-g9) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762 μ g plasmid pKG-U6gRNA (IL2RG-g 9): 1.238 μ g of plasmid pKG-GE 3.
The tenth group: porcine primary fibroblasts, without any transfection procedure.
Co-transfection was performed by electroporation using a mammalian nuclear transfection kit (Neon kit, Thermofeisher) and a Neon TM transfection system electrotransfer instrument (parameters set at 1450V, 10ms, 3 pulses).
2. After step 1, the culture is carried out for 16 to 18 hours by using the complete culture solution, and then the culture is carried out by replacing the complete culture solution with a new one. The total time of incubation was 48 hours.
3. After completion of step 2, the cells were trypsinized and harvested, genomic DNA was extracted, PCR amplified using a primer pair consisting of IL2RG-nF33 and IL2RG-nR460, and then electrophoresed and sequenced, as shown in FIG. 9.
The editing efficiency of different targets was obtained by analyzing the sequencing peak patterns using the syntheo ICE tool. The editing efficiency of the first group to the tenth group of different target points is 1%, 0%, 3%, 5%, 0%, 46%, 65%, 18%, 34% and 0% in sequence. The results show that the seventh group has the highest editing efficiency, sgRNAIL2RG-g7Is the optimal target point.
Example 4 screening of ADA Gene knockout targets
First, ADA gene knockout preset target and adjacent genome sequence conservation analysis
Pig ADA gene information: encoding adenosine deaminase; is located on chromosome 17;
GeneID 100625920, Sus scrofa. The protein coded by the pig ADA gene is shown as SEQ ID NO: shown at 15. In the genome DNA, the pig ADA gene has 12 exons, wherein the 4 th exon and the sequences of 500bp on the upstream and the downstream of the exon are shown as SEQ ID NO: shown at 16.
The genomic DNA of 8 pigs was used as a template, and PCR amplification was carried out using a primer set consisting of the primer ADA-GT-F259/ADA-GT-R1005, followed by electrophoresis, as shown in FIG. 10. And recovering PCR amplification products, sequencing, and comparing and analyzing the sequencing result with the ADA gene sequence in the public database. Based on the alignment, primers for detecting mutations were designed (the primers themselves avoid potential mutation sites). Primers designed to detect mutations were: ADA-nnF229/ADA-nnR 456.
ADA-GT-F259:5’-GTTAAGGATCTGGTGTTGCGGTG-3’;
ADA-GT-R1005:5’-GTTCACACTCCTAGACTCCAGCC-3’。
ADA-nnF229:5’-GAGGCCGTCAAAAGGATTGC-3’;
ADA-nnR456:5’-CAAAGTCTCTCTTGGGTCAGGG-3’。
Secondly, screening target spots
And primarily screening a plurality of targets by screening NGG (avoiding possible mutation sites), and further screening 8 targets from the NGG through a preliminary experiment.
The 8 targets were as follows:
sgRNAADA-g1and (3) target point: 5'-AAGGATTGCCTACGAGTTTG-3', respectively;
sgRNAADA-g2and (3) target point: 5'-TTGGAGTTGGCCAGCAGGTG-3', respectively;
sgRNAADA-g3and (3) target point: 5'-TTTCATCTCCACAAACTCGT-3', respectively;
sgRNAADA-g4and (3) target point: 5'-TCAGCCTGGTTCCAGGGGAT-3', respectively;
sgRNAADA-g6and (3) target point: 5'-CCTGCTGGCCAACTCCAAAG-3', respectively;
sgRNAADA-g7and (3) target point: 5'-GGAGGGCGTGGTGTACGTGG-3', respectively;
sgRNAADA-g8and (3) target point: 5'-CAAGGAGGGCGTGGTGTACG-3', respectively;
sgRNAADA-g9and (3) target point: 5'-TGTGGAGATGAAAGCCAAGG-3' are provided.
Thirdly, preparing recombinant plasmid
The plasmid pKG-U6gRNA was digested with the restriction enzyme BbsI, and the vector backbone (approximately 3kb linear large fragment) was recovered.
ADA-g1S and ADA-g1A were synthesized separately, mixed and annealed to obtain double-stranded DNA molecules having cohesive ends (FIG. 11A). Double strand D having cohesive endsThe NA molecule was ligated to the vector backbone to give plasmid pKG-U6gRNA (ADA-g 1). Plasmid pKG-U6gRNA (ADA-g1)) expresses SEQ ID NO: 17 sgRNAADA-g1
SEQ ID NO:17:
AAGGAUUGCCUACGAGUUUGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g2S and ADA-g2A were synthesized separately, mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 11B). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 2). Plasmid pKG-U6gRNA (ADA-g2) expresses the nucleic acid sequence of SEQ ID NO: 18 of sgRNAADA-g2
SEQ ID NO:18:
UUGGAGUUGGCCAGCAGGUGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g3S and ADA-g3A were synthesized separately, mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 11C). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 3). Plasmid pKG-U6gRNA (ADA-g3) expresses the nucleic acid sequence of SEQ ID NO: 19 sgRNAADA-g3
SEQ ID NO:19:
UUUCAUCUCCACAAACUCGUguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g4S and ADA-g4A were synthesized separately, mixed and annealed to obtain double-stranded DNA molecules having cohesive ends (FIG. 11D). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 4). Plasmid pKG-U6gRNA (ADA-g4) expresses the nucleic acid sequence of SEQ ID NO: 20 sgRNAADA-g4。
SEQ ID NO:20:
UCAGCCUGGUUCCAGGGGAUguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g6S and ADA-g6A were synthesized separately, mixed and annealed to obtain double-stranded DNA molecules having cohesive ends (FIG. 11E). Will have sticky endsThe double-stranded DNA molecule was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 6). Plasmid pKG-U6gRNA (ADA-g6) expresses the nucleic acid sequence of SEQ ID NO: 21 sgRNAADA-g6
SEQ ID NO:21:
CCUGCUGGCCAACUCCAAAGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g7S and ADA-g7A were synthesized separately, mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 11F). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 7). Plasmid pKG-U6gRNA (ADA-g7) expresses the nucleic acid sequence of SEQ ID NO: 22 of sgRNAADA-g7
SEQ ID NO:22:
GGAGGGCGUGGUGUACGUGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-G8S and ADA-G8A were synthesized separately, mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 11G). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 8). Plasmid pKG-U6gRNA (ADA-g8) expresses the nucleic acid sequence of SEQ ID NO: 23 sgRNAADA-g8
SEQ ID NO:23:
CAAGGAGGGCGUGGUGUACGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
ADA-g9S and ADA-g9A were synthesized separately, mixed and annealed to obtain a double-stranded DNA molecule having cohesive ends (FIG. 11H). The double-stranded DNA molecule having a cohesive end was ligated to a vector backbone to obtain plasmid pKG-U6gRNA (ADA-g 9). Plasmid pKG-U6gRNA (ADA-g9) expresses the nucleic acid sequence of SEQ ID NO: 24 sgRNAADA-g9
SEQ ID NO:24:
UGUGGAGAUGAAAGCCAAGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu
sgRNA-ADA-1S:5’-caccgAAGGATTGCCTACGAGTTTG-3’;
sgRNA-ADA-1A:5’-aaacCAAACTCGTAGGCAATCCTTc-3’。
sgRNA-ADA-2S:5’-caccgTTGGAGTTGGCCAGCAGGTG-3’;
sgRNA-ADA-2A:5’-aaacCACCTGCTGGCCAACTCCAAc-3’。
sgRNA-ADA-3S:5’-caccgTTTCATCTCCACAAACTCGT-3’;
sgRNA-ADA-3A:5’-aaacACGAGTTTGTGGAGATGAAAc-3’。
sgRNA-ADA-4S:5’-caccgTCAGCCTGGTTCCAGGGGAT-3’;
sgRNA-ADA-4A:5’-aaacATCCCCTGGAACCAGGCTGAc-3’。
sgRNA-ADA-6S:5’-caccgCCTGCTGGCCAACTCCAAAG-3’;
sgRNA-ADA-6A:5’-aaacCTTTGGAGTTGGCCAGCAGGc-3’。
sgRNA-ADA-7S:5’-caccGGAGGGCGTGGTGTACGTGG-3’;
sgRNA-ADA-7A:5’-aaacCCACGTACACCACGCCCTCC-3’。
sgRNA-ADA-8S:5’-caccgCAAGGAGGGCGTGGTGTACG-3’;
sgRNA-ADA-8A:5’-aaacCGTACACCACGCCCTCCTTGc-3’。
sgRNA-ADA-9S:5’-caccgTGTGGAGATGAAAGCCAAGG-3’;
sgRNA-ADA-9A:5’-aaacCCTTGGCTTTCATCTCCACAc-3’。
sgRNA-ADA-1S, sgRNA-ADA-1A, sgRNA-ADA-2S, sgRNA-ADA-2A, sgRNA-ADA-3S, sgRNA-ADA-3A, sgRNA-ADA-4S, sgRNA-ADA-4A, sgRNA-ADA-6S, sgRNA-ADA-6A, sgRNA-ADA-7S, sgRNA-ADA-7A, sgRNA-ADA-8S, sgRNA-ADA-8A, sgRNA-ADA-9S, sgRNA-ADA-9A are all single-stranded DNA molecules.
Four, comparison of editing efficiency of different target points
1. Cotransfection
A first group: plasmid pKG-U6gRNA (ADA-g1) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 1): 1.238 μ g of plasmid pKG-GE 3.
Second group: plasmid pKG-U6gRNA (ADA-g2) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 2): 1.238 μ g of plasmid pKG-GE 3.
Third group: plasmid pKG-U6gRNA (ADA-g3) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 3): 1.238 μ g of plasmid pKG-GE 3.
And a fourth group: plasmid pKG-U6gRNA (ADA-g4) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 4): 1.238 μ g of plasmid pKG-GE 3.
And a fifth group: plasmid pKG-U6gRNA (ADA-g6) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 6): 1.238 μ g of plasmid pKG-GE 3.
A sixth group: plasmid pKG-U6gRNA (ADA-g7) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 7): 1.238 μ g of plasmid pKG-GE 3.
A seventh group: plasmid pKG-U6gRNA (ADA-g8) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 8): 1.238 μ g of plasmid pKG-GE 3.
And an eighth group: plasmid pKG-U6gRNA (ADA-g9) and plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.762. mu.g plasmid pKG-U6gRNA (ADA-g 9): 1.238 μ g of plasmid pKG-GE 3.
Ninth group: porcine primary fibroblasts, without any transfection procedure.
Co-transfection was performed by electroporation using a mammalian nuclear transfection kit (Neon kit, Thermofeisher) and a Neon TM transfection system electrotransfer instrument (parameters set at 1450V, 10ms, 3 pulses).
2. After step 1, the culture is carried out for 16 to 18 hours by using the complete culture solution, and then the culture is carried out by replacing the complete culture solution with a new one. The total time of incubation was 48 hours.
3. After completion of step 2, the cells were trypsinized and harvested, genomic DNA was extracted, PCR amplified using a primer pair consisting of ADA-nnF229 and ADA-nnR456, and then electrophoresed and sequenced, as shown in FIG. 12.
The editing efficiency of different targets was obtained by analyzing the sequencing peak patterns using the syntheo ICE tool. The editing efficiency of the first group to the ninth group of different target points is 19%, 17%, 9%, 0%, 2%, 35%, 29%, 20% and 0% in sequence. The result shows that the editing efficiency of the sixth group is highest, and sgRNAADA-g7Is the optimal target point.
Example 5 preparation of IL2RG and ADA Gene-edited monoclonal cells
1. Cotransfection
The plasmid pKG-U6gRNA (IL2RG-g7), the plasmid pKG-U6gRNA (ADA-g7) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Proportioning: about 20 million porcine primary fibroblasts: 0.44. mu.g plasmid pKG-U6gRNA (IL2RG-g 7): 0.44. mu.g plasmid pKG-U6gRNA (ADA-g 7): 2.12. mu.g of plasmid pKG-GE 3.
Co-transfection was performed by electroporation using a mammalian nuclear transfection kit (Neon kit, Thermofeisher) and a Neon TM transfection system electrotransfer instrument (parameters set at 1450V, 10ms, 3 pulses).
2. After step 1, the culture is carried out for 16 to 18 hours by using the complete culture solution, and then the culture is carried out by replacing the complete culture solution with a new one. The total time of incubation was 48 hours.
3. After completion of step 2, cells were trypsinized and collected, then washed with complete medium, then resuspended with complete medium, and then each individual monoclonal was picked up and transferred to a 96-well plate (1 cell per well with 200. mu.l of complete medium per well) for 2 weeks (replacement of new complete medium every 2-3 days).
4. After completion of step 3, cells were trypsinized and harvested (cells from each well, approximately 2/3 were plated into 6-well plates containing complete medium and the remaining 1/3 collected in 1.5mL centrifuge tubes).
5. The 6-well plate of step 4 was taken, cultured until the cells grew to 50% full, trypsinized and collected, and the cells were cryopreserved using a cell cryopreservation solution (90% complete medium + 10% DMSO by volume).
6. Taking the centrifuge tube in the step 4, taking cells, extracting genomic DNA, performing PCR amplification (respectively adopting a primer pair consisting of IL2RG-nF33 and IL2RG-nR460 and a primer pair consisting of ADA-nnF229 and ADA-nnR 456), and then performing electrophoresis. Porcine primary fibroblasts were used as wild type controls.
7. After completion of step 6, the PCR amplification product was recovered and sequenced.
The sequencing result of the primary pig fibroblast is only one, and the genotype of the primary pig fibroblast is homozygous wild type. If the sequencing result of a certain monoclonal cell has two types, one type is consistent with the sequencing result of the pig primary fibroblast, and the other type has mutation (mutation comprises deletion, insertion or substitution of one or more nucleotides) compared with the sequencing result of the pig primary fibroblast, the genotype of the monoclonal cell is heterozygote; if the sequencing result of a certain monoclonal cell is two types, the two types of the sequencing results are both mutated (the mutation comprises deletion, insertion or substitution of one or more nucleotides) compared with the sequencing result of the pig primary fibroblast, and the genotype of the monoclonal cell is a biallelic different mutant type; if the sequencing result of a certain monoclonal cell is one and mutation (mutation comprises deletion, insertion or substitution of one or more nucleotides) is generated compared with the sequencing result of the pig primary fibroblast, the genotype of the monoclonal cell is a biallelic gene identical mutant; if the sequencing result of a certain monoclonal cell is one and is consistent with the sequencing result of the pig primary fibroblast, the genotype of the monoclonal cell is a homozygous wild type.
The results of the IL2RG gene editing are shown in Table 1. The genotypes of the monoclonal cells numbered 7, 26, 30 and 35 are biallelic different mutants. The genotypes of the monoclonal cells numbered 14, 21 and 39 were heterozygous. The monoclonal cells numbered 15, 16, 19, 20, 28, 31, 49 all showed a complex set of peaks, and thus no valid sequence was obtained, and genotype and specific form could not be determined, but it was judged that gene editing occurred. The obtained IL2RG gene edited monoclonal cells at a rate of 14/53. An exemplary sequencing peak profile for IL2RG is shown in FIG. 13.
TABLE 1
Figure BDA0002684309660000151
Figure BDA0002684309660000161
Figure BDA0002684309660000171
The ADA gene was edited as shown in Table 2. The genotypes of the monoclonal cells numbered 19 and 26 are biallelic identical mutants. The genotypes of the monoclonal cells numbered 35 and 49 are biallelic different mutants. The genotype of the monoclonal cell numbered 5 was heterozygous. The monoclonal cells numbered 7, 9, 12, 15, 20, 21, 28, 30, 31, 45 all showed a complex set of peaks, and thus no effective sequence could be obtained, and genotype and specific form could not be determined, but it could be judged that gene editing occurred. The resulting ADA gene-edited monoclonal cell ratio was 15/53. An exemplary ADA sequencing peak profile is shown in FIG. 14.
TABLE 2
Figure BDA0002684309660000172
Figure BDA0002684309660000181
8. After completion of step 7, monoclonal cells were selected for simultaneous IL2RG and ADA gene knock-outs.
The monoclonal cells numbered 7, 15, 19, 20, 21, 26, 28, 30, 31, 35 and 49 were analyzed as monoclonal cells with IL2RG and ADA genes knocked out simultaneously.
The present invention has been described in detail above. It will be apparent to those skilled in the art that the invention can be practiced in a wide range of equivalent parameters, concentrations, and conditions without departing from the spirit and scope of the invention and without undue experimentation. While the invention has been described with reference to specific embodiments, it will be appreciated that the invention can be further modified. In general, this application is intended to cover any variations, uses, or adaptations of the invention following, in general, the principles of the invention and including such departures from the present disclosure as come within known or customary practice within the art to which the invention pertains. The use of some of the essential features is possible within the scope of the claims attached below.
SEQUENCE LISTING
<110> Nanjing King Gene engineering Co., Ltd
<120> IL2RG gene and ADA gene combined knockout recombinant cell and application thereof in preparation of immunodeficient pig model
<130> GNCYX202101
<160> 24
<170> PatentIn version 3.5
<210> 1
<211> 8484
<212> DNA
<213> Artificial sequence
<400> 1
gagggcctat ttcccatgat tccttcatat ttgcatatac gatacaaggc tgttagagag 60
ataattggaa ttaatttgac tgtaaacaca aagatattag tacaaaatac gtgacgtaga 120
aagtaataat ttcttgggta gtttgcagtt ttaaaattat gttttaaaat ggactatcat 180
atgcttaccg taacttgaaa gtatttcgat ttcttggctt tatatatctt gtggaaagga 240
cgaaacaccg ggtcttcgag aagacctgtt ttagagctag aaatagcaag ttaaaataag 300
gctagtccgt tatcaacttg aaaaagtggc accgagtcgg tgcttttttg ttttagagct 360
agaaatagca agttaaaata aggctagtcc gtttttagcg cgtgcgccaa ttctgcagac 420
aaatggctct agaggtaccc gttacataac ttacggtaaa tggcccgcct ggctgaccgc 480
ccaacgaccc ccgcccattg acgtcaatag taacgccaat agggactttc cattgacgtc 540
aatgggtgga gtatttacgg taaactgccc acttggcagt acatcaagtg tatcatatgc 600
caagtacgcc ccctattgac gtcaatgacg gtaaatggcc cgcctggcat tgtgcccagt 660
acatgacctt atgggacttt cctacttggc agtacatcta cgtattagtc atcgctatta 720
ccatggtcga ggtgagcccc acgttctgct tcactctccc catctccccc ccctccccac 780
ccccaatttt gtatttattt attttttaat tattttgtgc agcgatgggg gcgggggggg 840
ggggggggcg gggcgagggg cggggcgggg cgaggcggag aggtgcggcg gcagccaatc 900
agagcggcgc gctccgaaag tttcctttta tggcgaggcg gcggcggcgg cggccctata 960
aaaagcgaag cgcgcggcgg gcgggagtcg ctgcgcgctg ccttcgcccc gtgccccgct 1020
ccgccgccgc ctcgcgccgc ccgccccggc tctgactgac cgcgttactc ccacaggtga 1080
gcgggcggga cggcccttct cctccgggct gtaattagct gagcaagagg taagggttta 1140
agggatggtt ggttggtggg gtattaatgt ttaattacct ggagcacctg cctgaaatca 1200
ctttttttca ggttggaccg gtgccaccat ggactataag gaccacgacg gagactacaa 1260
ggatcatgat attgattaca aagacgatga cgataagatg gccccaaaga agaagcggaa 1320
ggtcggtatc cacggagtcc cagcagccga caagaagtac agcatcggcc tggacatcgg 1380
caccaactct gtgggctggg ccgtgatcac cgacgagtac aaggtgccca gcaagaaatt 1440
caaggtgctg ggcaacaccg accggcacag catcaagaag aacctgatcg gagccctgct 1500
gttcgacagc ggcgaaacag ccgaggccac ccggctgaag agaaccgcca gaagaagata 1560
caccagacgg aagaaccgga tctgctatct gcaagagatc ttcagcaacg agatggccaa 1620
ggtggacgac agcttcttcc acagactgga agagtccttc ctggtggaag aggataagaa 1680
gcacgagcgg caccccatct tcggcaacat cgtggacgag gtggcctacc acgagaagta 1740
ccccaccatc taccacctga gaaagaaact ggtggacagc accgacaagg ccgacctgcg 1800
gctgatctat ctggccctgg cccacatgat caagttccgg ggccacttcc tgatcgaggg 1860
cgacctgaac cccgacaaca gcgacgtgga caagctgttc atccagctgg tgcagaccta 1920
caaccagctg ttcgaggaaa accccatcaa cgccagcggc gtggacgcca aggccatcct 1980
gtctgccaga ctgagcaaga gcagacggct ggaaaatctg atcgcccagc tgcccggcga 2040
gaagaagaat ggcctgttcg gaaacctgat tgccctgagc ctgggcctga cccccaactt 2100
caagagcaac ttcgacctgg ccgaggatgc caaactgcag ctgagcaagg acacctacga 2160
cgacgacctg gacaacctgc tggcccagat cggcgaccag tacgccgacc tgtttctggc 2220
cgccaagaac ctgtccgacg ccatcctgct gagcgacatc ctgagagtga acaccgagat 2280
caccaaggcc cccctgagcg cctctatgat caagagatac gacgagcacc accaggacct 2340
gaccctgctg aaagctctcg tgcggcagca gctgcctgag aagtacaaag agattttctt 2400
cgaccagagc aagaacggct acgccggcta cattgacggc ggagccagcc aggaagagtt 2460
ctacaagttc atcaagccca tcctggaaaa gatggacggc accgaggaac tgctcgtgaa 2520
gctgaacaga gaggacctgc tgcggaagca gcggaccttc gacaacggca gcatccccca 2580
ccagatccac ctgggagagc tgcacgccat tctgcggcgg caggaagatt tttacccatt 2640
cctgaaggac aaccgggaaa agatcgagaa gatcctgacc ttccgcatcc cctactacgt 2700
gggccctctg gccaggggaa acagcagatt cgcctggatg accagaaaga gcgaggaaac 2760
catcaccccc tggaacttcg aggaagtggt ggacaagggc gcttccgccc agagcttcat 2820
cgagcggatg accaacttcg ataagaacct gcccaacgag aaggtgctgc ccaagcacag 2880
cctgctgtac gagtacttca ccgtgtataa cgagctgacc aaagtgaaat acgtgaccga 2940
gggaatgaga aagcccgcct tcctgagcgg cgagcagaaa aaggccatcg tggacctgct 3000
gttcaagacc aaccggaaag tgaccgtgaa gcagctgaaa gaggactact tcaagaaaat 3060
cgagtgcttc gactccgtgg aaatctccgg cgtggaagat cggttcaacg cctccctggg 3120
cacataccac gatctgctga aaattatcaa ggacaaggac ttcctggaca atgaggaaaa 3180
cgaggacatt ctggaagata tcgtgctgac cctgacactg tttgaggaca gagagatgat 3240
cgaggaacgg ctgaaaacct atgcccacct gttcgacgac aaagtgatga agcagctgaa 3300
gcggcggaga tacaccggct ggggcaggct gagccggaag ctgatcaacg gcatccggga 3360
caagcagtcc ggcaagacaa tcctggattt cctgaagtcc gacggcttcg ccaacagaaa 3420
cttcatgcag ctgatccacg acgacagcct gacctttaaa gaggacatcc agaaagccca 3480
ggtgtccggc cagggcgata gcctgcacga gcacattgcc aatctggccg gcagccccgc 3540
cattaagaag ggcatcctgc agacagtgaa ggtggtggac gagctcgtga aagtgatggg 3600
ccggcacaag cccgagaaca tcgtgatcga aatggccaga gagaaccaga ccacccagaa 3660
gggacagaag aacagccgcg agagaatgaa gcggatcgaa gagggcatca aagagctggg 3720
cagccagatc ctgaaagaac accccgtgga aaacacccag ctgcagaacg agaagctgta 3780
cctgtactac ctgcagaatg ggcgggatat gtacgtggac caggaactgg acatcaaccg 3840
gctgtccgac tacgatgtgg accatatcgt gcctcagagc tttctgaagg acgactccat 3900
cgacaacaag gtgctgacca gaagcgacaa gaaccggggc aagagcgaca acgtgccctc 3960
cgaagaggtc gtgaagaaga tgaagaacta ctggcggcag ctgctgaacg ccaagctgat 4020
tacccagaga aagttcgaca atctgaccaa ggccgagaga ggcggcctga gcgaactgga 4080
taaggccggc ttcatcaaga gacagctggt ggaaacccgg cagatcacaa agcacgtggc 4140
acagatcctg gactcccgga tgaacactaa gtacgacgag aatgacaagc tgatccggga 4200
agtgaaagtg atcaccctga agtccaagct ggtgtccgat ttccggaagg atttccagtt 4260
ttacaaagtg cgcgagatca acaactacca ccacgcccac gacgcctacc tgaacgccgt 4320
cgtgggaacc gccctgatca aaaagtaccc taagctggaa agcgagttcg tgtacggcga 4380
ctacaaggtg tacgacgtgc ggaagatgat cgccaagagc gagcaggaaa tcggcaaggc 4440
taccgccaag tacttcttct acagcaacat catgaacttt ttcaagaccg agattaccct 4500
ggccaacggc gagatccgga agcggcctct gatcgagaca aacggcgaaa ccggggagat 4560
cgtgtgggat aagggccggg attttgccac cgtgcggaaa gtgctgagca tgccccaagt 4620
gaatatcgtg aaaaagaccg aggtgcagac aggcggcttc agcaaagagt ctatcctgcc 4680
caagaggaac agcgataagc tgatcgccag aaagaaggac tgggacccta agaagtacgg 4740
cggcttcgac agccccaccg tggcctattc tgtgctggtg gtggccaaag tggaaaaggg 4800
caagtccaag aaactgaaga gtgtgaaaga gctgctgggg atcaccatca tggaaagaag 4860
cagcttcgag aagaatccca tcgactttct ggaagccaag ggctacaaag aagtgaaaaa 4920
ggacctgatc atcaagctgc ctaagtactc cctgttcgag ctggaaaacg gccggaagag 4980
aatgctggcc tctgccggcg aactgcagaa gggaaacgaa ctggccctgc cctccaaata 5040
tgtgaacttc ctgtacctgg ccagccacta tgagaagctg aagggctccc ccgaggataa 5100
tgagcagaaa cagctgtttg tggaacagca caagcactac ctggacgaga tcatcgagca 5160
gatcagcgag ttctccaaga gagtgatcct ggccgacgct aatctggaca aagtgctgtc 5220
cgcctacaac aagcaccggg ataagcccat cagagagcag gccgagaata tcatccacct 5280
gtttaccctg accaatctgg gagcccctgc cgccttcaag tactttgaca ccaccatcga 5340
ccggaagagg tacaccagca ccaaagaggt gctggacgcc accctgatcc accagagcat 5400
caccggcctg tacgagacac ggatcgacct gtctcagctg ggaggcgaca aaaggccggc 5460
ggccacgaaa aaggccggcc aggcaaaaaa gaaaaagtaa gaattcctag agctcgctga 5520
tcagcctcga ctgtgccttc tagttgccag ccatctgttg tttgcccctc ccccgtgcct 5580
tccttgaccc tggaaggtgc cactcccact gtcctttcct aataaaatga ggaaattgca 5640
tcgcattgtc tgagtaggtg tcattctatt ctggggggtg gggtggggca ggacagcaag 5700
ggggaggatt gggaagagaa tagcaggcat gctggggagc ggccgcagga acccctagtg 5760
atggagttgg ccactccctc tctgcgcgct cgctcgctca ctgaggccgg gcgaccaaag 5820
gtcgcccgac gcccgggctt tgcccgggcg gcctcagtga gcgagcgagc gcgcagctgc 5880
ctgcaggggc gcctgatgcg gtattttctc cttacgcatc tgtgcggtat ttcacaccgc 5940
atacgtcaaa gcaaccatag tacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg 6000
tggttacgcg cagcgtgacc gctacacttg ccagcgcctt agcgcccgct cctttcgctt 6060
tcttcccttc ctttctcgcc acgttcgccg gctttccccg tcaagctcta aatcgggggc 6120
tccctttagg gttccgattt agtgctttac ggcacctcga ccccaaaaaa cttgatttgg 6180
gtgatggttc acgtagtggg ccatcgccct gatagacggt ttttcgccct ttgacgttgg 6240
agtccacgtt ctttaatagt ggactcttgt tccaaactgg aacaacactc aactctatct 6300
cgggctattc ttttgattta taagggattt tgccgatttc ggtctattgg ttaaaaaatg 6360
agctgattta acaaaaattt aacgcgaatt ttaacaaaat attaacgttt acaattttat 6420
ggtgcactct cagtacaatc tgctctgatg ccgcatagtt aagccagccc cgacacccgc 6480
caacacccgc tgacgcgccc tgacgggctt gtctgctccc ggcatccgct tacagacaag 6540
ctgtgaccgt ctccgggagc tgcatgtgtc agaggttttc accgtcatca ccgaaacgcg 6600
cgagacgaaa gggcctcgtg atacgcctat ttttataggt taatgtcatg ataataatgg 6660
tttcttagac gtcaggtggc acttttcggg gaaatgtgcg cggaacccct atttgtttat 6720
ttttctaaat acattcaaat atgtatccgc tcatgagaca ataaccctga taaatgcttc 6780
aataatattg aaaaaggaag agtatgagta ttcaacattt ccgtgtcgcc cttattccct 6840
tttttgcggc attttgcctt cctgtttttg ctcacccaga aacgctggtg aaagtaaaag 6900
atgctgaaga tcagttgggt gcacgagtgg gttacatcga actggatctc aacagcggta 6960
agatccttga gagttttcgc cccgaagaac gttttccaat gatgagcact tttaaagttc 7020
tgctatgtgg cgcggtatta tcccgtattg acgccgggca agagcaactc ggtcgccgca 7080
tacactattc tcagaatgac ttggttgagt actcaccagt cacagaaaag catcttacgg 7140
atggcatgac agtaagagaa ttatgcagtg ctgccataac catgagtgat aacactgcgg 7200
ccaacttact tctgacaacg atcggaggac cgaaggagct aaccgctttt ttgcacaaca 7260
tgggggatca tgtaactcgc cttgatcgtt gggaaccgga gctgaatgaa gccataccaa 7320
acgacgagcg tgacaccacg atgcctgtag caatggcaac aacgttgcgc aaactattaa 7380
ctggcgaact acttactcta gcttcccggc aacaattaat agactggatg gaggcggata 7440
aagttgcagg accacttctg cgctcggccc ttccggctgg ctggtttatt gctgataaat 7500
ctggagccgg tgagcgtgga agccgcggta tcattgcagc actggggcca gatggtaagc 7560
cctcccgtat cgtagttatc tacacgacgg ggagtcaggc aactatggat gaacgaaata 7620
gacagatcgc tgagataggt gcctcactga ttaagcattg gtaactgtca gaccaagttt 7680
actcatatat actttagatt gatttaaaac ttcattttta atttaaaagg atctaggtga 7740
agatcctttt tgataatctc atgaccaaaa tcccttaacg tgagttttcg ttccactgag 7800
cgtcagaccc cgtagaaaag atcaaaggat cttcttgaga tccttttttt ctgcgcgtaa 7860
tctgctgctt gcaaacaaaa aaaccaccgc taccagcggt ggtttgtttg ccggatcaag 7920
agctaccaac tctttttccg aaggtaactg gcttcagcag agcgcagata ccaaatactg 7980
ttcttctagt gtagccgtag ttaggccacc acttcaagaa ctctgtagca ccgcctacat 8040
acctcgctct gctaatcctg ttaccagtgg ctgctgccag tggcgataag tcgtgtctta 8100
ccgggttgga ctcaagacga tagttaccgg ataaggcgca gcggtcgggc tgaacggggg 8160
gttcgtgcac acagcccagc ttggagcgaa cgacctacac cgaactgaga tacctacagc 8220
gtgagctatg agaaagcgcc acgcttcccg aagggagaaa ggcggacagg tatccggtaa 8280
gcggcagggt cggaacagga gagcgcacga gggagcttcc agggggaaac gcctggtatc 8340
tttatagtcc tgtcgggttt cgccacctct gacttgagcg tcgatttttg tgatgctcgt 8400
caggggggcg gagcctatgg aaaaacgcca gcaacgcggc ctttttacgg ttcctggcct 8460
tttgctggcc ttttgctcac atgt 8484
<210> 2
<211> 10476
<212> DNA
<213> Artificial sequence
<400> 2
gagggcctat ttcccatgat tccttcatat ttgcatatac gatacaaggc tgttagagag 60
ataattggaa ttaatttgac tgtaaacaca aagatattag tacaaaatac gtgacgtaga 120
aagtaataat ttcttgggta gtttgcagtt ttaaaattat gttttaaaat ggactatcat 180
atgcttaccg taacttgaaa gtatttcgat ttcttggctt tatatatctt gtggaaagga 240
cgaaacaccg ggtcttcgag aagacctgtt ttagagctag aaatagcaag ttaaaataag 300
gctagtccgt tatcaacttg aaaaagtggc accgagtcgg tgcttttttc tagcgcgtgc 360
gccaattctg cagacaaatg gctctagagg tacccgttac ataacttacg gtaaatggcc 420
cgcctggctg accgcccaac gacccccgcc cattgacgtc aatagtaacg ccaataggga 480
ctttccattg acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc 540
aagtgtatca tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa tggcccgcct 600
ggcattgtgc ccagtacatg accttatggg actttcctac ttggcagtac atctacgtat 660
tagtcatcgc tattaccatg ggggcagagc gcacatcgcc cacagtcccc gagaagttgg 720
ggggaggggt cggcaattga tccggtgcct agagaaggtg gcgcggggta aactgggaaa 780
gtgatgtcgt gtactggctc cgcctttttc ccgagggtgg gggagaaccg tatataagtg 840
cagtagtcgc cgtgaacgtt ctttttcgca acgggtttgc cgccagaaca caggttggac 900
cggtgccacc atggactata aggaccacga cggagactac aaggatcatg atattgatta 960
caaagacgat gacgataaga tggcccccaa aaagaaacga aaggtgggtg ggtccccaaa 1020
gaagaagcgg aaggtcggta tccacggagt cccagcagcc gacaagaagt acagcatcgg 1080
cctggacatc ggcaccaact ctgtgggctg ggccgtgatc accgacgagt acaaggtgcc 1140
cagcaagaaa ttcaaggtgc tgggcaacac cgaccggcac agcatcaaga agaacctgat 1200
cggagccctg ctgttcgaca gcggcgaaac agccgaggcc acccggctga agagaaccgc 1260
cagaagaaga tacaccagac ggaagaaccg gatctgctat ctgcaagaga tcttcagcaa 1320
cgagatggcc aaggtggacg acagcttctt ccacagactg gaagagtcct tcctggtgga 1380
agaggataag aagcacgagc ggcaccccat cttcggcaac atcgtggacg aggtggccta 1440
ccacgagaag taccccacca tctaccacct gagaaagaaa ctggtggaca gcaccgacaa 1500
ggccgacctg cggctgatct atctggccct ggcccacatg atcaagttcc ggggccactt 1560
cctgatcgag ggcgacctga accccgacaa cagcgacgtg gacaagctgt tcatccagct 1620
ggtgcagacc tacaaccagc tgttcgagga aaaccccatc aacgccagcg gcgtggacgc 1680
caaggccatc ctgtctgcca gactgagcaa gagcagacgg ctggaaaatc tgatcgccca 1740
gctgcccggc gagaagaaga atggcctgtt cggaaacctg attgccctga gcctgggcct 1800
gacccccaac ttcaagagca acttcgacct ggccgaggat gccaaactgc agctgagcaa 1860
ggacacctac gacgacgacc tggacaacct gctggcccag atcggcgacc agtacgccga 1920
cctgtttctg gccgccaaga acctgtccga cgccatcctg ctgagcgaca tcctgagagt 1980
gaacaccgag atcaccaagg cccccctgag cgcctctatg atcaagagat acgacgagca 2040
ccaccaggac ctgaccctgc tgaaagctct cgtgcggcag cagctgcctg agaagtacaa 2100
agagattttc ttcgaccaga gcaagaacgg ctacgccggc tacattgacg gcggagccag 2160
ccaggaagag ttctacaagt tcatcaagcc catcctggaa aagatggacg gcaccgagga 2220
actgctcgtg aagctgaaca gagaggacct gctgcggaag cagcggacct tcgacaacgg 2280
cagcatcccc caccagatcc acctgggaga gctgcacgcc attctgcggc ggcaggaaga 2340
tttttaccca ttcctgaagg acaaccggga aaagatcgag aagatcctga ccttccgcat 2400
cccctactac gtgggccctc tggccagggg aaacagcaga ttcgcctgga tgaccagaaa 2460
gagcgaggaa accatcaccc cctggaactt cgaggaagtg gtggacaagg gcgcttccgc 2520
ccagagcttc atcgagcgga tgaccaactt cgataagaac ctgcccaacg agaaggtgct 2580
gcccaagcac agcctgctgt acgagtactt caccgtgtat aacgagctga ccaaagtgaa 2640
atacgtgacc gagggaatga gaaagcccgc cttcctgagc ggcgagcaga aaaaggccat 2700
cgtggacctg ctgttcaaga ccaaccggaa agtgaccgtg aagcagctga aagaggacta 2760
cttcaagaaa atcgagtgct tcgactccgt ggaaatctcc ggcgtggaag atcggttcaa 2820
cgcctccctg ggcacatacc acgatctgct gaaaattatc aaggacaagg acttcctgga 2880
caatgaggaa aacgaggaca ttctggaaga tatcgtgctg accctgacac tgtttgagga 2940
cagagagatg atcgaggaac ggctgaaaac ctatgcccac ctgttcgacg acaaagtgat 3000
gaagcagctg aagcggcgga gatacaccgg ctggggcagg ctgagccgga agctgatcaa 3060
cggcatccgg gacaagcagt ccggcaagac aatcctggat ttcctgaagt ccgacggctt 3120
cgccaacaga aacttcatgc agctgatcca cgacgacagc ctgaccttta aagaggacat 3180
ccagaaagcc caggtgtccg gccagggcga tagcctgcac gagcacattg ccaatctggc 3240
cggcagcccc gccattaaga agggcatcct gcagacagtg aaggtggtgg acgagctcgt 3300
gaaagtgatg ggccggcaca agcccgagaa catcgtgatc gaaatggcca gagagaacca 3360
gaccacccag aagggacaga agaacagccg cgagagaatg aagcggatcg aagagggcat 3420
caaagagctg ggcagccaga tcctgaaaga acaccccgtg gaaaacaccc agctgcagaa 3480
cgagaagctg tacctgtact acctgcagaa tgggcgggat atgtacgtgg accaggaact 3540
ggacatcaac cggctgtccg actacgatgt ggaccatatc gtgcctcaga gctttctgaa 3600
ggacgactcc atcgacaaca aggtgctgac cagaagcgac aagaaccggg gcaagagcga 3660
caacgtgccc tccgaagagg tcgtgaagaa gatgaagaac tactggcggc agctgctgaa 3720
cgccaagctg attacccaga gaaagttcga caatctgacc aaggccgaga gaggcggcct 3780
gagcgaactg gataaggccg gcttcatcaa gagacagctg gtggaaaccc ggcagatcac 3840
aaagcacgtg gcacagatcc tggactcccg gatgaacact aagtacgacg agaatgacaa 3900
gctgatccgg gaagtgaaag tgatcaccct gaagtccaag ctggtgtccg atttccggaa 3960
ggatttccag ttttacaaag tgcgcgagat caacaactac caccacgccc acgacgccta 4020
cctgaacgcc gtcgtgggaa ccgccctgat caaaaagtac cctaagctgg aaagcgagtt 4080
cgtgtacggc gactacaagg tgtacgacgt gcggaagatg atcgccaaga gcgagcagga 4140
aatcggcaag gctaccgcca agtacttctt ctacagcaac atcatgaact ttttcaagac 4200
cgagattacc ctggccaacg gcgagatccg gaagcggcct ctgatcgaga caaacggcga 4260
aaccggggag atcgtgtggg ataagggccg ggattttgcc accgtgcgga aagtgctgag 4320
catgccccaa gtgaatatcg tgaaaaagac cgaggtgcag acaggcggct tcagcaaaga 4380
gtctatcctg cccaagagga acagcgataa gctgatcgcc agaaagaagg actgggaccc 4440
taagaagtac ggcggcttcg acagccccac cgtggcctat tctgtgctgg tggtggccaa 4500
agtggaaaag ggcaagtcca agaaactgaa gagtgtgaaa gagctgctgg ggatcaccat 4560
catggaaaga agcagcttcg agaagaatcc catcgacttt ctggaagcca agggctacaa 4620
agaagtgaaa aaggacctga tcatcaagct gcctaagtac tccctgttcg agctggaaaa 4680
cggccggaag agaatgctgg cctctgccgg cgaactgcag aagggaaacg aactggccct 4740
gccctccaaa tatgtgaact tcctgtacct ggccagccac tatgagaagc tgaagggctc 4800
ccccgaggat aatgagcaga aacagctgtt tgtggaacag cacaagcact acctggacga 4860
gatcatcgag cagatcagcg agttctccaa gagagtgatc ctggccgacg ctaatctgga 4920
caaagtgctg tccgcctaca acaagcaccg ggataagccc atcagagagc aggccgagaa 4980
tatcatccac ctgtttaccc tgaccaatct gggagcccct gccgccttca agtactttga 5040
caccaccatc gaccggaaga ggtacaccag caccaaagag gtgctggacg ccaccctgat 5100
ccaccagagc atcaccggcc tgtacgagac acggatcgac ctgtctcagc tgggaggcga 5160
caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa aagaaaaagg gcggctccaa 5220
gcggcctgcc gcgacgaaga aagcgggaca ggccaagaaa aagaaaggat ccggcgcaac 5280
aaacttctct ctgctgaaac aagccggaga tgtcgaagag aatcctggac cggtgagcaa 5340
gggcgaggag ctgttcaccg gggtggtgcc catcctggtc gagctggacg gcgacgtaaa 5400
cggccacaag ttcagcgtgt ccggcgaggg cgagggcgat gccacctacg gcaagctgac 5460
cctgaagttc atctgcacca ccggcaagct gcccgtgccc tggcccaccc tcgtgaccac 5520
cctgacctac ggcgtgcagt gcttcagccg ctaccccgac cacatgaagc agcacgactt 5580
cttcaagtcc gccatgcccg aaggctacgt ccaggagcgc accatcttct tcaaggacga 5640
cggcaactac aagacccgcg ccgaggtgaa gttcgagggc gacaccctgg tgaaccgcat 5700
cgagctgaag ggcatcgact tcaaggagga cggcaacatc ctggggcaca agctggagta 5760
caactacaac agccacaacg tctatatcat ggccgacaag cagaagaacg gcatcaaggt 5820
gaacttcaag atccgccaca acatcgagga cggcagcgtg cagctcgccg accactacca 5880
gcagaacacc cccatcggcg acggccccgt gctgctgccc gacaaccact acctgagcac 5940
ccagtccgcc ctgagcaaag accccaacga gaagcgcgat cacatggtcc tgctggagtt 6000
cgtgaccgcc gccgggatca ctctcggcat ggacgagctg tacaagggct ccggcgaggg 6060
caggggaagt cttctaacat gcggggacgt ggaggaaaat cccggcccaa ccgagtacaa 6120
gcccacggtg cgcctcgcca cccgcgacga cgtccccagg gccgtacgca ccctcgccgc 6180
cgcgttcgcc gactaccccg ccacgcgcca caccgtcgat ccggaccgcc acatcgagcg 6240
ggtcaccgag ctgcaagaac tcttcctcac gcgcgtcggg ctcgacatcg gcaaggtgtg 6300
ggtcgcggac gacggcgccg cggtggcggt ctggaccacg ccggagagcg tcgaagcggg 6360
ggcggtgttc gccgagatcg gcccgcgcat ggccgagttg agcggttccc ggctggccgc 6420
gcagcaacag atggaaggcc tcctggcgcc gcaccggccc aaggagcccg cgtggttcct 6480
ggccaccgtc ggagtctcgc ccgaccacca gggcaagggt ctgggcagcg ccgtcgtgct 6540
ccccggagtg gaggcggccg agcgcgccgg ggtgcccgcc ttcctggaga cctccgcgcc 6600
ccgcaacctc cccttctacg agcggctcgg cttcaccgtc accgccgacg tcgaggtgcc 6660
cgaaggaccg cgcacctggt gcatgacccg caagcccggt gcctgaacgc gttaagtcga 6720
caatcaacct ctggattaca aaatttgtga aagattgact ggtattctta actatgttgc 6780
tccttttacg ctatgtggat acgctgcttt aatgcctttg tatcatgcta ttgcttcccg 6840
tatggctttc attttctcct ccttgtataa atcctggttg ctgtctcttt atgaggagtt 6900
gtggcccgtt gtcaggcaac gtggcgtggt gtgcactgtg tttgctgacg caacccccac 6960
tggttggggc attgccacca cctgtcagct cctttccggg actttcgctt tccccctccc 7020
tattgccacg gcggaactca tcgccgcctg ccttgcccgc tgctggacag gggctcggct 7080
gttgggcact gacaattccg tggtgttgtc ggggaaatca tcgtcctttc cttggctgct 7140
cgcctgtgtt gccacctgga ttctgcgcgg gacgtccttc tgctacgtcc cttcggccct 7200
caatccagcg gaccttcctt cccgcggcct gctgccggct ctgcggcctc ttccgcgtct 7260
tcgccttcgc cctcagacga gtcggatctc cctttgggcc gcctccccgc gtcgacttta 7320
agaccaatga cttacaaggc agctgtagat cttagccact ttttaaaaga aaagggggga 7380
ctggaagggc taattcactc ccaacgaaga caagatctgc tttttgcttg tactgggtct 7440
ctctggttag accagatctg agcctgggag ctctctggct aactagggaa cccactgctt 7500
aagcctcaat aaagcttgcc ttgagtgctt caagtagtgt gtgcccgtct gttgtgtgac 7560
tctggtaact agagatccct cagacccttt tagtcagtgt ggaaaatctc tagcagggcc 7620
cgtttaaacc cgctgatcag cctcgactgt gccttctagt tgccagccat ctgttgtttg 7680
cccctccccc gtgccttcct tgaccctgga aggtgccact cccactgtcc tttcctaata 7740
aaatgaggaa attgcatcgc attgtctgag taggtgtcat tctattctgg ggggtggggt 7800
ggggcaggac agcaaggggg aggattggga agacaatagc aggcatgctg gggatgcggt 7860
gggctctatg gcctgcaggg gcgcctgatg cggtattttc tccttacgca tctgtgcggt 7920
atttcacacc gcatacgtca aagcaaccat agtacgcgcc ctgtagcggc gcattaagcg 7980
cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc ttagcgcccg 8040
ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc cgtcaagctc 8100
taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc gaccccaaaa 8160
aacttgattt gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg gtttttcgcc 8220
ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact ggaacaacac 8280
tcaactctat ctcgggctat tcttttgatt tataagggat tttgccgatt tcggtctatt 8340
ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa atattaacgt 8400
ttacaatttt atggtgcact ctcagtacaa tctgctctga tgccgcatag ttaagccagc 8460
cccgacaccc gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc ccggcatccg 8520
cttacagaca agctgtgacc gtctccggga gctgcatgtg tcagaggttt tcaccgtcat 8580
caccgaaacg cgcgagacga aagggcctcg tgatacgcct atttttatag gttaatgtca 8640
tgataataat ggtttcttag acgtcaggtg gcacttttcg gggaaatgtg cgcggaaccc 8700
ctatttgttt atttttctaa atacattcaa atatgtatcc gctcatgaga caataaccct 8760
gataaatgct tcaataatat tgaaaaagga agagtatgag tattcaacat ttccgtgtcg 8820
cccttattcc cttttttgcg gcattttgcc ttcctgtttt tgctcaccca gaaacgctgg 8880
tgaaagtaaa agatgctgaa gatcagttgg gtgcacgagt gggttacatc gaactggatc 8940
tcaacagcgg taagatcctt gagagttttc gccccgaaga acgttttcca atgatgagca 9000
cttttaaagt tctgctatgt ggcgcggtat tatcccgtat tgacgccggg caagagcaac 9060
tcggtcgccg catacactat tctcagaatg acttggttga gtactcacca gtcacagaaa 9120
agcatcttac ggatggcatg acagtaagag aattatgcag tgctgccata accatgagtg 9180
ataacactgc ggccaactta cttctgacaa cgatcggagg accgaaggag ctaaccgctt 9240
ttttgcacaa catgggggat catgtaactc gccttgatcg ttgggaaccg gagctgaatg 9300
aagccatacc aaacgacgag cgtgacacca cgatgcctgt agcaatggca acaacgttgc 9360
gcaaactatt aactggcgaa ctacttactc tagcttcccg gcaacaatta atagactgga 9420
tggaggcgga taaagttgca ggaccacttc tgcgctcggc ccttccggct ggctggttta 9480
ttgctgataa atctggagcc ggtgagcgtg gaagccgcgg tatcattgca gcactggggc 9540
cagatggtaa gccctcccgt atcgtagtta tctacacgac ggggagtcag gcaactatgg 9600
atgaacgaaa tagacagatc gctgagatag gtgcctcact gattaagcat tggtaactgt 9660
cagaccaagt ttactcatat atactttaga ttgatttaaa acttcatttt taatttaaaa 9720
ggatctaggt gaagatcctt tttgataatc tcatgaccaa aatcccttaa cgtgagtttt 9780
cgttccactg agcgtcagac cccgtagaaa agatcaaagg atcttcttga gatccttttt 9840
ttctgcgcgt aatctgctgc ttgcaaacaa aaaaaccacc gctaccagcg gtggtttgtt 9900
tgccggatca agagctacca actctttttc cgaaggtaac tggcttcagc agagcgcaga 9960
taccaaatac tgttcttcta gtgtagccgt agttaggcca ccacttcaag aactctgtag 10020
caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc agtggcgata 10080
agtcgtgtct taccgggttg gactcaagac gatagttacc ggataaggcg cagcggtcgg 10140
gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac accgaactga 10200
gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga aaggcggaca 10260
ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt ccagggggaa 10320
acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag cgtcgatttt 10380
tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgcg gcctttttac 10440
ggttcctggc cttttgctgg ccttttgctc acatgt 10476
<210> 3
<211> 3120
<212> DNA
<213> Artificial sequence
<400> 3
gacgaaaggg cctcgtgata cgcctatttt tataggttaa tgtcatgata ataatggttt 60
cttagacgtc aggtggcact tttcggggaa atgtgcgcgg aacccctatt tgtttatttt 120
tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa atgcttcaat 180
aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt attccctttt 240
ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa gtaaaagatg 300
ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac agcggtaaga 360
tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt aaagttctgc 420
tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt cgccgcatac 480
actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat cttacggatg 540
gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac actgcggcca 600
acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg cacaacatgg 660
gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc ataccaaacg 720
acgagcgtga caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa ctattaactg 780
gcgaactact tactctagct tcccggcaac aattaataga ctggatggag gcggataaag 840
ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct gataaatctg 900
gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat ggtaagccct 960
cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa cgaaatagac 1020
agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac caagtttact 1080
catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc taggtgaaga 1140
tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc cactgagcgt 1200
cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg cgcgtaatct 1260
gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg gatcaagagc 1320
taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca aatactgttc 1380
ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg cctacatacc 1440
tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg tgtcttaccg 1500
ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga acggggggtt 1560
cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac ctacagcgtg 1620
agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat ccggtaagcg 1680
gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc tggtatcttt 1740
atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga tgctcgtcag 1800
gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc ctggcctttt 1860
gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg gataaccgta 1920
ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag cgcagcgagt 1980
cagtgagcga ggaagcggaa gagcgcccaa tacgcaaacc gcctctcccc gcgcgttggc 2040
cgattcatta atgcagctgg cacgacaggt ttcccgactg gaaagcgggc agtgagcgca 2100
acgcaattaa tgtgagttag ctcactcatt aggcacccca ggctttacac tttatgcttc 2160
cggctcgtat gttgtgtgga attgtgagcg gataacaatt tcacacagga aacagctatg 2220
accatgatta cgccaagctt gcatgcaggc ctctgcagtc gacgggcccg ggatccgatg 2280
ataaacatgt gagggcctat ttcccatgat tccttcatat ttgcatatac gatacaaggc 2340
tgttagagag ataattggaa ttaatttgac tgtaaacaca aagatattag tacaaaatac 2400
gtgacgtaga aagtaataat ttcttgggta gtttgcagtt ttaaaattat gttttaaaat 2460
ggactatcat atgcttaccg taacttgaaa gtatttcgat ttcttggctt tatatatctt 2520
gtggaaagga cgaaacaccg ggtcttcgag aagacctgtt ttagagctag aaatagcaag 2580
ttaaaataag gctagtccgt tatcaacttg aaaaagtggc accgagtcgg tgcttttttc 2640
tagcgcgtgc gccaattctg cagacaaatg gctctagagg tacccataga tctagatgca 2700
ttcgcgaggt accgagctcg aattcactgg ccgtcgtttt acaacgtcgt gactgggaaa 2760
accctggcgt tacccaactt aatcgccttg cagcacatcc ccctttcgcc agctggcgta 2820
atagcgaaga ggcccgcacc gatcgccctt cccaacagtt gcgcagcctg aatggcgaat 2880
ggcgcctgat gcggtatttt ctccttacgc atctgtgcgg tatttcacac cgcatatggt 2940
gcactctcag tacaatctgc tctgatgccg catagttaag ccagccccga cacccgccaa 3000
cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac agacaagctg 3060
tgaccgtctc cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg aaacgcgcga 3120
<210> 4
<211> 368
<212> PRT
<213> Sus scrofa
<400> 4
Met Leu Lys Pro Pro Leu Pro Val Lys Ser Leu Leu Phe Leu Gln Leu
1 5 10 15
Pro Leu Leu Gly Val Gly Leu Asn Pro Lys Val Leu Thr His Ser Gly
20 25 30
Asn Glu Asp Ile Thr Ala Asp Phe Leu Leu Leu Ser Thr Pro Pro Gly
35 40 45
Thr Leu Asn Val Ser Thr Leu Pro Leu Pro Lys Val Gln Cys Phe Val
50 55 60
Phe Asn Val Glu Tyr Met Asn Cys Thr Trp Asn Ser Ser Ser Glu Leu
65 70 75 80
Gln Pro Thr Asn Leu Thr Leu His Tyr Trp Tyr Lys Thr Ser Asn Asp
85 90 95
Asp Lys Val Gln Glu Cys Gly His Tyr Leu Phe Ser Glu Gly Ile Thr
100 105 110
Ser Gly Cys Trp Phe Gly Lys Glu Glu Ile Arg Leu Tyr Gln Thr Phe
115 120 125
Val Val Gln Leu Gln Asp Pro Arg Glu Pro Arg Arg Gln Asp Pro Gln
130 135 140
Thr Leu Lys Leu Gln Asp Leu Val Ile Pro Trp Ala Pro Ala Asn Leu
145 150 155 160
Thr Leu Arg Thr Leu Ser Glu Ser Gln Leu Glu Leu Asn Trp Ser Asn
165 170 175
Arg Tyr Leu Asp His Cys Leu Glu His Leu Val Gln Tyr Arg Ser Asp
180 185 190
Arg Asp Arg Ser Trp Thr Glu Gln Ser Val Asp His Arg Gln Ser Phe
195 200 205
Ser Leu Pro Ser Val Asp Ala Gln Lys Leu Tyr Thr Phe Arg Val Arg
210 215 220
Ser Arg Tyr Asn Pro Leu Cys Gly Ser Ala Gln Arg Trp Ser Asp Trp
225 230 235 240
Ser His Pro Ile His Trp Gly Asn Thr Ser Lys Glu Asn Pro Leu Leu
245 250 255
Phe Ala Leu Glu Ala Val Leu Ile Pro Leu Gly Ser Met Gly Leu Ile
260 265 270
Val Gly Leu Met Cys Val Tyr Cys Trp Leu Glu Arg Thr Met Pro Arg
275 280 285
Ile Pro Thr Leu Lys Asn Leu Glu Asp Leu Val Thr Glu Tyr His Gly
290 295 300
Asn Phe Ser Ala Trp Ser Gly Val Ser Lys Gly Leu Ala Glu Ser Leu
305 310 315 320
Gln Pro Asp Tyr Ser Glu Arg Leu Cys His Val Ser Glu Ile Ser Pro
325 330 335
Lys Gly Gly Ala Leu Gly Glu Gly Pro Gly Gly Ser Pro Cys Ser Gln
340 345 350
His Ser Pro Tyr Trp Ala Pro Pro Cys Tyr Thr Leu Lys Pro Glu Thr
355 360 365
<210> 5
<211> 1185
<212> DNA
<213> Sus scrofa
<400> 5
aaattttaga gtactggggg gagggcaagg ggaagggttc cctgcctagt gctgcttctt 60
cttctgacca tcatgtcttc cctttgcctc ccccacttca ttttctcccc gtcctagatt 120
tcctcctgct ctctacaccc cctgggactc tcaacgtttc cactctaccc ctcccaaagg 180
ttcagtgttt tgtgttcaat gttgagtaca tgaattgcac ttggaacagc agctctgagc 240
tccagcctac caacctaact ctgcactact ggtatgagaa gggaagaggg gatatagcac 300
aggggaggga ggaagaggcg ctgggctaga tgtgagagat tgtgtgagga ccaagaaaga 360
ggttagccag catcccaggc ttcccactat attctcgtgg ggtaagtcat aagtcagttc 420
gtaggagctg aggctggact gtggaatctg tggtattcac atttacctca ctgttattct 480
tccttgaaat ccttctctag gtacaagacc tctaatgatg ataaagtcca ggagtgtggc 540
cactatctat tctctgaagg gatcacttct ggctgttggt ttggaaaaga ggagatccgc 600
ctctaccaaa catttgttgt ccagctccag gacccacggg aacccaggag gcaggaccca 660
cagacgctaa aactacagga tctgggtaat ttggaaatgg ggagggtcaa gggatattgt 720
gggggtattg gtgtatgtag agtggtattc ttgcaccata agggtacttg ggcagaaaag 780
aagaagtgag ggatccaatg gggtcgggag gagggatcag gagcactgcc ctcaggatcc 840
tgacttgtct aggccagggg aatgaccaca cacgcacaca tatctccagt gatcccctgg 900
gcgccggcga atctgaccct tcgcaccctg agtgaatccc agctagaact cagctggagc 960
aaccgatact tggaccactg tttggagcac ctcgtgcaat accggagtga ccgggaccgc 1020
agctggactg tgagtgagtg ggaacagcag ctggggctga gcaagtgggg ataaaggatt 1080
caatcagtcc agtaggaagg cttgattccc agctcctatt ctctgcatcc tggtgcctct 1140
gcccaccttc tcccctcctt ggactccttt ctctgtcgtc accat 1185
<210> 6
<211> 100
<212> RNA
<213> Artificial sequence
<400> 6
ccuguaguuu uagcgucugu guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 7
<211> 100
<212> RNA
<213> Artificial sequence
<400> 7
caacaaaugu uugguagagg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 8
<211> 100
<212> RNA
<213> Artificial sequence
<400> 8
gaugauaaag uccaggagug guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 9
<211> 100
<212> RNA
<213> Artificial sequence
<400> 9
cuggacuuua ucaucauuag guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 10
<211> 100
<212> RNA
<213> Artificial sequence
<400> 10
uuguccagcu ccaggaccca guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 11
<211> 100
<212> RNA
<213> Artificial sequence
<400> 11
ggccacuauc uauucucuga guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 12
<211> 100
<212> RNA
<213> Artificial sequence
<400> 12
ucccuucaga gaauagauag guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 13
<211> 100
<212> RNA
<213> Artificial sequence
<400> 13
aacauuuguu guccagcucc guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 14
<211> 100
<212> RNA
<213> Artificial sequence
<400> 14
uguccagcuc caggacccac guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 15
<211> 364
<212> PRT
<213> Sus scrofa
<400> 15
Met Thr Gln Thr Pro Ala Phe Asp Lys Pro Lys Val Glu Leu His Val
1 5 10 15
His Leu Asp Gly Ala Ile Lys Pro Glu Thr Ile Leu Tyr Tyr Gly Arg
20 25 30
Lys Arg Gly Ile Ala Leu Pro Ala Asn Thr Pro Glu Glu Leu Gln Asp
35 40 45
Val Ile Gly Met Asp Lys Pro Leu Ser Leu Pro Ala Phe Leu Ala Lys
50 55 60
Phe Asp Tyr Tyr Met Pro Ala Ile Ala Xaa Gly Leu Pro Glu Ala Val
65 70 75 80
Lys Arg Ile Ala Tyr Glu Phe Val Glu Met Lys Ala Lys Glu Gly Val
85 90 95
Val Tyr Val Glu Val Arg Tyr Ser Pro His Leu Leu Ala Asn Ser Lys
100 105 110
Val Glu Pro Ile Pro Trp Asn Gln Ala Glu Gly Asp Leu Thr Pro Asp
115 120 125
Glu Val Val Asp Leu Val Gly Gln Gly Leu Gln Glu Gly Glu Arg Asp
130 135 140
Phe Gly Val Lys Val Arg Ser Ile Leu Cys Cys Met Arg His Gln Pro
145 150 155 160
Thr Trp Ser Pro Glu Val Val Glu Leu Cys Lys Lys Tyr Arg Gln Gln
165 170 175
Thr Val Val Ala Ile Asp Leu Ala Gly Asp Glu Thr Ile Glu Gly Ser
180 185 190
Ser Leu Phe Pro Gly His Val Gln Ala Tyr Glu Glu Ala Val Lys Ser
195 200 205
Gly Val His Arg Thr Val His Ala Gly Glu Val Gly Ser Ala Glu Val
210 215 220
Val Lys Glu Ala Val Asp Thr Leu Lys Thr Glu Arg Leu Gly His Gly
225 230 235 240
Tyr His Thr Leu Glu Asp Glu Ala Leu Tyr Thr Arg Leu Arg Gln Ala
245 250 255
Asn Met His Phe Glu Val Cys Pro Trp Ser Ser Tyr Leu Thr Gly Ala
260 265 270
Trp Lys Pro Gly Thr Glu His Ala Val Ile Arg Phe Lys Asn Asp Gln
275 280 285
Ala Asn Tyr Ser Leu Asn Thr Asp Asp Pro Leu Ile Phe Lys Ser Thr
290 295 300
Leu Asp Thr Asp Tyr Gln Met Thr Lys Arg Asp Met Gly Phe Thr Glu
305 310 315 320
Glu Glu Phe Lys Arg Leu Asn Ile Asn Ala Ala Lys Ser Ser Phe Leu
325 330 335
Pro Asp Asp Glu Lys Thr Glu Leu Leu Asp Leu Leu Tyr Lys Ala Tyr
340 345 350
Gly Met Pro Pro Thr Ser Ser Ala Glu His Arg Pro
355 360
<210> 16
<211> 1143
<212> DNA
<213> Sus scrofa
<400> 16
cgtggagatg gggagactgg ttagagggcg aaggtggtta gaagcacaga ggaagggccg 60
agaactggca tagagatcag aaataaagct cagtggtaat gaacctgact agtatccata 120
aagatgtggg tctgatccct ggcctgctca gtgggttaag gatctggtgt tgcggtgagc 180
tgcggtgtag gtcgcagaca cggcctggat ctggcattgc catgactgtg gtatatgctg 240
gcagctccat tttgacctct ggcctgggaa cttacatatg tcatgagtgt agtcctaaaa 300
acaaacaaaa aaattagagc caatgggact ctctatgctt ctagaatttt cttcagcaga 360
tgccaagagc tcgagactga gtaataagac tgggggccag acatgggttt gatctgccac 420
aggttgtgga cagctttgtt actcctggag ctcccaagag acttgggcag cattgtcccc 480
aacccctctt tccttctcag gggctcccgg aggccgtcaa aaggattgcc tacgagtttg 540
tggagatgaa agccaaggag ggcgtggtgt acgtggaggt gcgctacagc ccgcacctgc 600
tggccaactc caaggtggag ccgatcccct ggaaccaggc tgagtgagca accacccgga 660
gggctgtggc ggggtggccc aacccgcaac cgagcggcgg actctcagga gaccctgacc 720
caagagagac tttgatcttg ctccctgtgc tggtccacgg cctcagaaag atgggcttgg 780
ccgtcctaag ggacaggttc ccatccctca cctgggcttg cgtgttcacc ttgggtgaaa 840
gcgtttggct gcgtggccgt ccctcgtcct agatacaggg ctggagtcta ggagtgtgaa 900
cctggttatc cagtgactcc tagagggcct gtcctaaccc tgtaactgaa gtgggtctgg 960
cctattcctg ccctctctgc ccggacctca gggaggtcta agtggtacca cccgactacc 1020
ttgctccctt ctagccatga ctttgatgct tgtggacatg tgggaatctg acaccatagc 1080
agcgctctcc atcttggggc gggggatggg tttgtgtgcg acaacccccc caacacactg 1140
gga 1143
<210> 17
<211> 100
<212> RNA
<213> Artificial sequence
<400> 17
aaggauugcc uacgaguuug guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 18
<211> 100
<212> RNA
<213> Artificial sequence
<400> 18
uuggaguugg ccagcaggug guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 19
<211> 100
<212> RNA
<213> Artificial sequence
<400> 19
uuucaucucc acaaacucgu guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 20
<211> 100
<212> RNA
<213> Artificial sequence
<400> 20
ucagccuggu uccaggggau guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 21
<211> 100
<212> RNA
<213> Artificial sequence
<400> 21
ccugcuggcc aacuccaaag guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 22
<211> 100
<212> RNA
<213> Artificial sequence
<400> 22
ggagggcgug guguacgugg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 23
<211> 100
<212> RNA
<213> Artificial sequence
<400> 23
caaggagggc gugguguacg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 24
<211> 100
<212> RNA
<213> Artificial sequence
<400> 24
uguggagaug aaagccaagg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

Claims (10)

  1. The application of sgRNA combination or plasmid combination in the preparation of a kit; the application of the kit is as follows (a) or (b): (a) preparing a recombinant cell; (b) preparing an immunodeficiency animal model;
    the sgRNA combination consists of sgRNAsIL2RG-g7And sgRNAADA-g7Composition is carried out;
    the plasmid combination consists of a plasmid pKG-T6gRNA (IL2RG-g7) and a plasmid pKG-T6gRNA (ADA-g 7);
    the sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (IL2RG-g7)IL2RG-g7
    The sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (ADA-g7)ADA-g7
    The sgRNAIL2RG-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20;
    the sgRNAADA-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20.
  2. 2. Use of the plasmid combination of claim 1 and plasmid pKG-GE3 in the preparation of a kit; the application of the kit is as follows (a) or (b): (a) preparing a recombinant cell; (b) preparing an immunodeficiency animal model;
    the plasmid pKG-GE3 has a specific fusion gene; the specific fusion gene encodes a specific fusion protein;
    the specific fusion protein sequentially comprises the following elements from N end to C end: two nuclear localization signals, Cas9 protein, two nuclear localization signals, self-splicing polypeptide P2A, fluorescent reporter protein, self-cleavage polypeptide T2A and resistance screening marker protein;
    in plasmid pKG-GE3, the expression of the specific fusion gene is driven by the EF1a promoter;
    in plasmid pKG-GE3, the specific fusion gene has downstream of it a WPRE sequence element, a 3' LTR sequence element and a bGH poly (A) signal sequence element.
  3. sgRNA combinations consisting of sgRNAsIL2RG-g7And sgRNAADA-g7Composition is carried out;
    the sgRNAIL2RG-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20;
    the sgRNAADA-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20.
  4. 4. A plasmid combination consisting of a plasmid pKG-T6gRNA (IL2RG-g7) and a plasmid pKG-T6gRNA (ADA-g 7);
    the sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (IL2RG-g7)IL2RG-g7
    The sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (ADA-g7)ADA-g7
    The sgRNAIL2RG-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20;
    the sgRNAADA-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20.
  5. 5. A kit comprising the sgRNA combination of claim 3 or the plasmid combination of claim 4; the application of the kit is as follows (a) or (b): (a) preparing a recombinant cell; (b) and (4) preparing an immunodeficiency animal model.
  6. 6. The kit of claim 5, wherein: the kit further comprises the plasmid pKG-GE3 as described in claim 2.
  7. 7. The sgRNA combination according to claim 3, or the plasmid combination according to claim 4, or the kit according to claim 5, or the kit according to claim 6, for use in (a) or (b) as follows: (a) preparing a recombinant cell; (b) and (4) preparing an immunodeficiency animal model.
  8. 8. A method of making a recombinant cell comprising the steps of: co-transfecting pig cells with plasmid pKG-T6gRNA (IL2RG-g7), plasmid pKG-T6gRNA (ADA-g7) and plasmid pKG-GE3 to obtain recombinant cells with mutated IL2RG genes and ADA genes;
    the sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (IL2RG-g7)IL2RG-g7
    The sgRNA is obtained by transcribing the plasmid pKG-T6gRNA (ADA-g7)ADA-g7
    The sgRNAIL2RG-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 12, nucleotides 1 to 20;
    the sgRNAADA-g7The target sequence binding region of (a) is as shown in SEQ ID NO: 22 from nucleotide 1 to nucleotide 20;
    the plasmid pKG-GE3 has a specific fusion gene; the specific fusion gene encodes a specific fusion protein;
    the specific fusion protein sequentially comprises the following elements from N end to C end: two nuclear localization signals, Cas9 protein, two nuclear localization signals, self-splicing polypeptide P2A, fluorescent reporter protein, self-cleavage polypeptide T2A and resistance screening marker protein;
    in plasmid pKG-GE3, the expression of the specific fusion gene is driven by the EF1a promoter;
    in plasmid pKG-GE3, the specific fusion gene has downstream of it a WPRE sequence element, a 3' LTR sequence element and a bGH poly (A) signal sequence element.
  9. 9. The recombinant cell produced by the method of claim 8.
  10. 10. Use of the recombinant cell of claim 9 for the preparation of an immunodeficient animal model.
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