CN102686747A - 使用探针杂交和限制性通过信号扩大而检测靶核酸的方法 - Google Patents

使用探针杂交和限制性通过信号扩大而检测靶核酸的方法 Download PDF

Info

Publication number
CN102686747A
CN102686747A CN2010800606469A CN201080060646A CN102686747A CN 102686747 A CN102686747 A CN 102686747A CN 2010800606469 A CN2010800606469 A CN 2010800606469A CN 201080060646 A CN201080060646 A CN 201080060646A CN 102686747 A CN102686747 A CN 102686747A
Authority
CN
China
Prior art keywords
sequence
probe
oligonucleotide probe
nucleic acid
oligonucleotide
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CN2010800606469A
Other languages
English (en)
Chinese (zh)
Inventor
J·纳德乌
T·赫雷尔
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Becton Dickinson and Co
Original Assignee
Becton Dickinson and Co
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Becton Dickinson and Co filed Critical Becton Dickinson and Co
Publication of CN102686747A publication Critical patent/CN102686747A/zh
Pending legal-status Critical Current

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/682Signal amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6823Release of bound markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN2010800606469A 2009-11-23 2010-11-23 使用探针杂交和限制性通过信号扩大而检测靶核酸的方法 Pending CN102686747A (zh)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US26359609P 2009-11-23 2009-11-23
US61/263,596 2009-11-23
PCT/US2010/057781 WO2011063388A2 (en) 2009-11-23 2010-11-23 Assay method for target nucleic acid by signal amplification using probe hybridization and restriction

Publications (1)

Publication Number Publication Date
CN102686747A true CN102686747A (zh) 2012-09-19

Family

ID=44060410

Family Applications (1)

Application Number Title Priority Date Filing Date
CN2010800606469A Pending CN102686747A (zh) 2009-11-23 2010-11-23 使用探针杂交和限制性通过信号扩大而检测靶核酸的方法

Country Status (5)

Country Link
US (1) US8916349B2 (enExample)
EP (1) EP2504453A4 (enExample)
JP (1) JP2013511292A (enExample)
CN (1) CN102686747A (enExample)
WO (1) WO2011063388A2 (enExample)

Cited By (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105555969A (zh) * 2013-06-18 2016-05-04 Lgc有限公司 具有通用元件的基于荧光团的寡核苷酸探针
CN108707652A (zh) * 2013-12-02 2018-10-26 苏州新波生物技术有限公司 核酸探针和检测基因组片段的方法
CN110730825A (zh) * 2017-05-23 2020-01-24 新泽西鲁特格斯州立大学 用双相互作用发夹探针进行的靶标介导的原位信号放大
CN113637728A (zh) * 2014-08-11 2021-11-12 卢米耐克斯公司 用于在核酸测定中改善解链分辨和多重性的探针

Families Citing this family (17)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2772123C (en) 2009-08-31 2018-03-06 The Governors Of The University Of Alberta Binding-induced hairpin detection system
US9603949B2 (en) 2011-09-01 2017-03-28 University Of Iowa Research Foundation Oligonucleotide-based probes for detection of bacterial nucleases
JP2015508655A (ja) * 2012-02-14 2015-03-23 コーネル ユニバーシティー 組み合わせたヌクレアーゼ反応、連結反応、およびポリメラーゼ反応を用いて核酸配列、発現、またはコピー変化を相対的に定量するための方法
GB201217770D0 (en) * 2012-10-04 2012-11-14 Base4 Innovation Ltd Biological probes and the use thereof
EP3102704B1 (en) 2014-02-07 2020-02-12 University of Iowa Research Foundation Oligonucleotide-based probes and methods for detection of microbes
US10947588B2 (en) 2014-06-19 2021-03-16 Multiplicom N.V. Restriction mediated quantitative polymerase chain reactions
WO2016141040A1 (en) * 2015-03-02 2016-09-09 The Regents Of The University Of California Homogenous entropy-driven biomolecular assay (heba)
JP2018526009A (ja) * 2015-09-03 2018-09-13 ナノストリング テクノロジーズ,インコーポレイティド ヌクレオチド1個の分解能を有する多価プローブ
ITUB20155686A1 (it) * 2015-11-18 2017-05-18 Fondazione St Italiano Tecnologia Procedimento di rivelazione di acidi nucleici e relativo kit.
ITUB20155706A1 (it) * 2015-11-18 2017-05-18 Fondazione St Italiano Tecnologia Procedimento di rivelazione di acidi nucleici e relativo kit.
CN109790566A (zh) * 2016-09-20 2019-05-21 贝斯4创新公司 单核苷酸检测方法及相关的探针
US20190023675A1 (en) * 2017-07-20 2019-01-24 Eastman Chemical Company Method for producing purified dialkyl-furan-2,5-dicarboxylate
JP7421202B2 (ja) 2017-09-29 2024-01-24 ユニバーシティー オブ アイオワ リサーチ ファンデーション デジタルヌクレアーゼ検出組成物および方法
EP4162068A4 (en) * 2020-06-04 2024-10-02 Logicink Corporation MULTIPLE DETECTION OF NUCLEIC ACID MARKERS AND SMALL MOLECULES
CN111944928B (zh) * 2020-09-01 2024-05-31 湖南工程学院 基于三链dna结构的多维立体网状杂交链式信号放大的检测eb病毒的序列组合和方法
CN114002200B (zh) * 2021-11-01 2024-05-07 中国科学院苏州纳米技术与纳米仿生研究所 近红外二区激活型探针及其应用
JP2025531879A (ja) * 2022-09-08 2025-09-25 アドヴァンスド セル ダイアグノスティックス インコーポレイテッド Rna遮断分子を使用した標的核酸の検出方法

Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5451503A (en) * 1992-01-22 1995-09-19 Gen-Probe Incorporated Method for use of branched nucleic acid probes
US20040142369A1 (en) * 1999-11-29 2004-07-22 Sara Alajem Oligonucleotides and assemblies thereof useful in the detection of the presence or absence of target nucleic acid sequences in a sample
JP2007075023A (ja) * 2005-09-15 2007-03-29 Shimadzu Corp 蛍光共鳴エネルギー移動法を用いた遺伝子多型検出法及びキット
CN101215600A (zh) * 2007-01-04 2008-07-09 中国科学院广州生物医药与健康研究院 核酸目的序列的检测探针及检测方法
CN101250593A (zh) * 2008-02-03 2008-08-27 广州益善生物技术有限公司 乳头瘤病毒检测与分型方法及其液相芯片
CN101328498A (zh) * 2008-06-11 2008-12-24 北京大学 一种通用、实时的核酸酶荧光检测方法
WO2009055366A1 (en) * 2007-10-22 2009-04-30 Translational Genomics Research Institute (Tgen) Method and kit used in performing high resolution genomic profiling of clonal cell populations in heterogeneous tissues
WO2010030716A1 (en) * 2008-09-10 2010-03-18 Igor Kutyavin Detection of nucleic acids by oligonucleotide probes cleaved in presence of endonuclease v
US20100279295A1 (en) * 2009-03-18 2010-11-04 Sequenom, Inc. Use of thermostable endonucleases for generating reporter molecules

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4766062A (en) 1984-05-07 1988-08-23 Allied Corporation Displacement polynucleotide assay method and polynucleotide complex reagent therefor
US5925517A (en) 1993-11-12 1999-07-20 The Public Health Research Institute Of The City Of New York, Inc. Detectably labeled dual conformation oligonucleotide probes, assays and kits
US5538848A (en) 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
US5866336A (en) 1996-07-16 1999-02-02 Oncor, Inc. Nucleic acid amplification oligonucleotides with molecular energy transfer labels and methods based thereon
US5846726A (en) 1997-05-13 1998-12-08 Becton, Dickinson And Company Detection of nucleic acids by fluorescence quenching
US5935791A (en) * 1997-09-23 1999-08-10 Becton, Dickinson And Company Detection of nucleic acids by fluorescence quenching
AU752220B2 (en) 1998-01-27 2002-09-12 British Biocell International Limited Modified nucleic acid probes and uses thereof
US6316200B1 (en) 2000-06-08 2001-11-13 Becton, Dickinson And Company Probes and methods for detection of nucleic acids
US7361469B2 (en) 2004-08-13 2008-04-22 Stratagene California Dual labeled fluorescent probes
EP2385141B1 (en) 2005-10-07 2013-08-07 SpeeDx Pty Ltd Multicomponent nucleic acid enzymes and methods for their use
WO2007060707A2 (en) 2005-11-23 2007-05-31 Diasorin Spa Reagents and method for simultaneous nucleic acid amplification and detection
NZ548731A (en) 2006-07-24 2008-12-24 Zygem Corp Ltd Isothermal detection methods and uses thereof

Patent Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5451503A (en) * 1992-01-22 1995-09-19 Gen-Probe Incorporated Method for use of branched nucleic acid probes
US20040142369A1 (en) * 1999-11-29 2004-07-22 Sara Alajem Oligonucleotides and assemblies thereof useful in the detection of the presence or absence of target nucleic acid sequences in a sample
JP2007075023A (ja) * 2005-09-15 2007-03-29 Shimadzu Corp 蛍光共鳴エネルギー移動法を用いた遺伝子多型検出法及びキット
CN101215600A (zh) * 2007-01-04 2008-07-09 中国科学院广州生物医药与健康研究院 核酸目的序列的检测探针及检测方法
WO2009055366A1 (en) * 2007-10-22 2009-04-30 Translational Genomics Research Institute (Tgen) Method and kit used in performing high resolution genomic profiling of clonal cell populations in heterogeneous tissues
CN101250593A (zh) * 2008-02-03 2008-08-27 广州益善生物技术有限公司 乳头瘤病毒检测与分型方法及其液相芯片
CN101328498A (zh) * 2008-06-11 2008-12-24 北京大学 一种通用、实时的核酸酶荧光检测方法
WO2010030716A1 (en) * 2008-09-10 2010-03-18 Igor Kutyavin Detection of nucleic acids by oligonucleotide probes cleaved in presence of endonuclease v
US20100279295A1 (en) * 2009-03-18 2010-11-04 Sequenom, Inc. Use of thermostable endonucleases for generating reporter molecules

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
JAMES G.NADEAU,ET AL.: "real-time,sequcence-specific detection of nucleic acids during stand displacement amplication", 《ANALYTICAL BIOCHEMISTRY》, vol. 276, 31 December 1999 (1999-12-31), pages 177 - 187 *

Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105555969A (zh) * 2013-06-18 2016-05-04 Lgc有限公司 具有通用元件的基于荧光团的寡核苷酸探针
CN108707652A (zh) * 2013-12-02 2018-10-26 苏州新波生物技术有限公司 核酸探针和检测基因组片段的方法
CN108707652B (zh) * 2013-12-02 2022-04-15 苏州新波生物技术有限公司 核酸探针和检测基因组片段的方法
CN113637728A (zh) * 2014-08-11 2021-11-12 卢米耐克斯公司 用于在核酸测定中改善解链分辨和多重性的探针
CN113637728B (zh) * 2014-08-11 2025-04-29 卢米耐克斯公司 用于在核酸测定中改善解链分辨和多重性的探针
CN110730825A (zh) * 2017-05-23 2020-01-24 新泽西鲁特格斯州立大学 用双相互作用发夹探针进行的靶标介导的原位信号放大
CN110730825B (zh) * 2017-05-23 2023-08-11 新泽西鲁特格斯州立大学 用双相互作用发夹探针进行的靶标介导的原位信号放大

Also Published As

Publication number Publication date
WO2011063388A3 (en) 2011-10-20
US8916349B2 (en) 2014-12-23
US20120322067A1 (en) 2012-12-20
JP2013511292A (ja) 2013-04-04
EP2504453A4 (en) 2013-07-17
EP2504453A2 (en) 2012-10-03
WO2011063388A2 (en) 2011-05-26

Similar Documents

Publication Publication Date Title
CN102686747A (zh) 使用探针杂交和限制性通过信号扩大而检测靶核酸的方法
Shen et al. Recent advances and perspectives of nucleic acid detection for coronavirus
EP3880843B1 (en) Method for detection of rna
EP2789689B1 (en) Chimeric primers with hairpin conformations and methods of using same
WO2018050828A1 (en) Methods for performing multiplexed real-time pcr
EP2285985A1 (en) Simultaneous detection of multiple nucleic acid sequences in a reaction
RU2012109893A (ru) Зонд td и его применения
WO2016101959A1 (en) Dual quenching assay for multiplex detection of target nucleic acids
WO2010009060A2 (en) Molecular beacon-based methods for detection of targets using abscription
US20250122577A1 (en) A method for detection of point mutations in target nucleic acid using loop-mediated isothermal amplification
CN112752850A (zh) 用于蛋白质检测的数字化扩增
EP3068897B1 (en) Detecting single nucleotide polymorphism using overlapped primer and melting probe
EP1426448A1 (en) Method for lowering the effects of sequence variations in a diagnostic hybridization assay, probe for use in the assay and assay
CA2862373A1 (en) Hev assay
AU2012299323B2 (en) Compositions, methods, and kits for nucleic acid hybridization
EP1829964A1 (en) Method of examining gene sequence
WO2011086006A1 (en) Method for detecting more than one target in a pcr-based approach applying an unspecific dye which is not interfering with the emission of fluorophore-labeled probes
EP4388133A2 (en) Compositions and methods for multiplex detection of mirna and other polynucelotides
EP4435115A1 (en) Improved padlock probes for nucleic acid detection by hyperbranched rolling circle amplification
KR20160094288A (ko) PNA 프로브를 이용한 실시간 중합효소연쇄반응의 임계 사이클(Ct)에 따른 핵산 검출의 문제를 해결하는 방법
US20240368688A1 (en) Methods and compositions for detection of mutant nucleic acid sequences
US20240209420A1 (en) Compositions and methods for multiplex detection of mirna and other polynucelotides
EP3971302A1 (en) Method for detecting 5-hydroxymethylated cytosine
JP4644944B2 (ja) 標的核酸検出法およびそのための試薬
CN108026569A (zh) 用于催化性测定的方法和组合物

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
C02 Deemed withdrawal of patent application after publication (patent law 2001)
WD01 Invention patent application deemed withdrawn after publication

Application publication date: 20120919