CA2418502A1 - Nanoparticules comportant des oligonucleotides fixes dessus et utilisations associees - Google Patents
Nanoparticules comportant des oligonucleotides fixes dessus et utilisations associees Download PDFInfo
- Publication number
- CA2418502A1 CA2418502A1 CA002418502A CA2418502A CA2418502A1 CA 2418502 A1 CA2418502 A1 CA 2418502A1 CA 002418502 A CA002418502 A CA 002418502A CA 2418502 A CA2418502 A CA 2418502A CA 2418502 A1 CA2418502 A1 CA 2418502A1
- Authority
- CA
- Canada
- Prior art keywords
- oligonucleotides
- nanoparticles
- nucleic acid
- bound
- sequence
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
- 0 C*=*(*)C1CCCC1 Chemical compound C*=*(*)C1CCCC1 0.000 description 1
Classifications
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y30/00—Nanotechnology for materials or surface science, e.g. nanocomposites
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y15/00—Nanotechnology for interacting, sensing or actuating, e.g. quantum dots as markers in protein assays or molecular motors
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6825—Nucleic acid detection involving sensors
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Genetics & Genomics (AREA)
- Analytical Chemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- General Engineering & Computer Science (AREA)
- Immunology (AREA)
- Biophysics (AREA)
- Nanotechnology (AREA)
- Crystallography & Structural Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Condensed Matter Physics & Semiconductors (AREA)
- Composite Materials (AREA)
- Materials Engineering (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
- Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
- Saccharide Compounds (AREA)
Abstract
L'invention concerne des procédés de détection d'acide nucléique. Ces procédés consistent à mettre en contact l'acide nucléique avec un ou plusieurs types de particules sur lesquels sont attachés des oligonucléotides. Dans une réalisation du procédé, les oligonucléotides sont attachés à des nanoparticules et contiennent des séquences complémentaires des portions de la séquence de l'acide nucléique. Un changement détectable (de préférence un changement de couleur) s'opère comme résultat de l'hybridation entre l'acide nucléique et les oligonucléotides portés par les nanoparticules. L'invention concerne en outre des compositions et des nécessaires contenant des nanoparticules. L'invention concerne aussi des procédés de synthèse de conjugués uniques nanoparticule-oligonucléotide, les conjugués produits à l'aide de ces procédés, et des procédés d'utilisation de ces conjugués. Elle concerne encore des nanomatériaux et des nanostructures comprenant des nanoparticules ainsi que des procédés de nanofabrication utilisant ces nanoparticules. Elle concerne enfin un procédé de séparation d'un acide nucléique sélectionné parmi d'autres acides nucléiques.
Applications Claiming Priority (11)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US22463100P | 2000-08-11 | 2000-08-11 | |
US60/224,631 | 2000-08-11 | ||
US25439200P | 2000-12-08 | 2000-12-08 | |
US60/254,392 | 2000-12-08 | ||
US25523500P | 2000-12-11 | 2000-12-11 | |
US60/255,235 | 2000-12-11 | ||
US09/760,500 | 2001-01-12 | ||
US09/760,500 US6767702B2 (en) | 1996-07-29 | 2001-01-12 | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US09/820,279 US6750016B2 (en) | 1996-07-29 | 2001-03-28 | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US09/820,279 | 2001-03-28 | ||
PCT/US2001/025237 WO2002018643A2 (fr) | 2000-08-11 | 2001-08-10 | Nanoparticules comportant des oligonucleotides fixes dessus et utilisations associees |
Publications (1)
Publication Number | Publication Date |
---|---|
CA2418502A1 true CA2418502A1 (fr) | 2002-03-07 |
Family
ID=27539880
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CA002418502A Abandoned CA2418502A1 (fr) | 2000-08-11 | 2001-08-10 | Nanoparticules comportant des oligonucleotides fixes dessus et utilisations associees |
Country Status (5)
Country | Link |
---|---|
EP (1) | EP1362121A2 (fr) |
JP (1) | JP2004525607A (fr) |
AU (1) | AU2001281248A1 (fr) |
CA (1) | CA2418502A1 (fr) |
WO (1) | WO2002018643A2 (fr) |
Families Citing this family (55)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6750016B2 (en) | 1996-07-29 | 2004-06-15 | Nanosphere, Inc. | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US6582921B2 (en) | 1996-07-29 | 2003-06-24 | Nanosphere, Inc. | Nanoparticles having oligonucleotides attached thereto and uses thereof |
CA2262018C (fr) | 1996-07-29 | 2007-10-02 | Nanosphere Llc | Nanoparticules sur lesquelles sont attaches des oligonucleotides et utilisations desdites nanoparticules |
US6506564B1 (en) | 1996-07-29 | 2003-01-14 | Nanosphere, Inc. | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US7098320B1 (en) | 1996-07-29 | 2006-08-29 | Nanosphere, Inc. | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US6984491B2 (en) | 1996-07-29 | 2006-01-10 | Nanosphere, Inc. | Nanoparticles having oligonucleotides attached thereto and uses therefor |
US6974669B2 (en) | 2000-03-28 | 2005-12-13 | Nanosphere, Inc. | Bio-barcodes based on oligonucleotide-modified nanoparticles |
CA2396113C (fr) | 2000-01-13 | 2009-04-07 | Nanosphere, Inc. | Nanoparticules auxquelles sont attaches des oligonucleotides et utilisations de ces dernieres |
CA2415494C (fr) | 2000-07-11 | 2007-09-18 | Northwestern University | Procede de detection par accroissement du marquage a l'argent |
ATE403751T1 (de) | 2001-11-09 | 2008-08-15 | Nanosphere Inc | Biokonjugat-nanopartikelsonden |
US20030211488A1 (en) | 2002-05-07 | 2003-11-13 | Northwestern University | Nanoparticle probs with Raman spectrocopic fingerprints for analyte detection |
FR2841156B1 (fr) * | 2002-06-19 | 2004-09-10 | Bio Merieux | Nouvelles particules magnetiques fluorescentes,ainsi que les conjugues de telles particules et les compositions diagnostiques , therapeutiques ou prophylactiques les contenant |
US7153687B2 (en) | 2002-08-13 | 2006-12-26 | Hong Kong Dna Chips Limited | Apparatus and methods for detecting DNA in biological samples |
JP4732683B2 (ja) * | 2003-12-29 | 2011-07-27 | ユニバーサル・バイオ・リサーチ株式会社 | 標的物質の検出方法 |
ES2242528B1 (es) * | 2004-03-25 | 2006-12-01 | Consejo Sup. Investig. Cientificas | Nanoparticulas magneticas de metales nobles. |
JP2005292007A (ja) | 2004-04-01 | 2005-10-20 | Seiko Epson Corp | 核酸固定化方法およびそれを用いるバイオセンサの製造方法 |
US20080213177A1 (en) * | 2004-05-24 | 2008-09-04 | Thomas William Rademacher | Nanoparticles Comprising Rna Ligands |
JP2006322709A (ja) * | 2005-05-17 | 2006-11-30 | Institute Of Physical & Chemical Research | 物質固定化基板 |
JP4821219B2 (ja) * | 2005-09-02 | 2011-11-24 | ニプロ株式会社 | 定性反応用試験片 |
KR100816419B1 (ko) * | 2005-10-14 | 2008-03-27 | 래플진(주) | 핵산의 등온증폭 방법 및 핵산과 신호 프로브의 동시등온증폭을 이용한 핵산의 검출방법 |
JP5089589B2 (ja) * | 2006-08-10 | 2012-12-05 | 古河電気工業株式会社 | 吸光物質含有コロイドシリカ粒子、ナノ吸光材料、及び吸光標識ナノビーズキット |
US8835358B2 (en) | 2009-12-15 | 2014-09-16 | Cellular Research, Inc. | Digital counting of individual molecules by stochastic attachment of diverse labels |
WO2012085064A1 (fr) | 2010-12-23 | 2012-06-28 | Roche Diagnostics Gmbh | Détection d'un polypeptide à modification post-translationnelle par un agent de liaison bivalent |
WO2012085069A2 (fr) * | 2010-12-23 | 2012-06-28 | Roche Diagnostics Gmbh | Détection d'un dimère polypeptidique par un agent de liaison bivalent |
WO2012085111A1 (fr) | 2010-12-23 | 2012-06-28 | F. Hoffmann-La Roche Ag | Complexe polypeptide-polynucléotide et son utilisation dans l'administration d'une fraction effectrice ciblée |
US9335292B2 (en) | 2011-10-13 | 2016-05-10 | Auburn University | Electrochemical proximity assay |
GB2504240B (en) | 2012-02-27 | 2015-05-27 | Cellular Res Inc | Compositions and kits for molecular counting of nucleic acids |
JP6545682B2 (ja) | 2013-08-28 | 2019-07-17 | ベクトン・ディキンソン・アンド・カンパニーBecton, Dickinson And Company | 大規模並列単一細胞分析 |
EP3262192B1 (fr) | 2015-02-27 | 2020-09-16 | Becton, Dickinson and Company | Codage à barres moléculaire à adressage spatial |
ES2934982T3 (es) | 2015-03-30 | 2023-02-28 | Becton Dickinson Co | Métodos para la codificación con códigos de barras combinatorios |
US11390914B2 (en) | 2015-04-23 | 2022-07-19 | Becton, Dickinson And Company | Methods and compositions for whole transcriptome amplification |
CN108026524A (zh) | 2015-09-11 | 2018-05-11 | 赛卢拉研究公司 | 用于核酸文库标准化的方法和组合物 |
US10301677B2 (en) | 2016-05-25 | 2019-05-28 | Cellular Research, Inc. | Normalization of nucleic acid libraries |
US10640763B2 (en) | 2016-05-31 | 2020-05-05 | Cellular Research, Inc. | Molecular indexing of internal sequences |
US10202641B2 (en) | 2016-05-31 | 2019-02-12 | Cellular Research, Inc. | Error correction in amplification of samples |
KR102522023B1 (ko) | 2016-09-26 | 2023-04-17 | 셀룰러 리서치, 인크. | 바코딩된 올리고뉴클레오티드 서열을 갖는 시약을 이용한 단백질 발현의 측정 |
US11319583B2 (en) | 2017-02-01 | 2022-05-03 | Becton, Dickinson And Company | Selective amplification using blocking oligonucleotides |
US10852274B2 (en) | 2017-03-09 | 2020-12-01 | Auburn University | Differential circuit for background correction in electrochemical measurements |
CA3059559A1 (fr) | 2017-06-05 | 2018-12-13 | Becton, Dickinson And Company | Indexation d'echantillon pour des cellules uniques |
US11505799B2 (en) | 2017-07-07 | 2022-11-22 | Innamed, Inc. | Aptamers for measuring lipoprotein levels |
CN112272710A (zh) | 2018-05-03 | 2021-01-26 | 贝克顿迪金森公司 | 高通量多组学样品分析 |
CN112243461B (zh) | 2018-05-03 | 2024-07-12 | 贝克顿迪金森公司 | 在相对的转录物末端进行分子条形码化 |
US11560565B2 (en) | 2018-06-13 | 2023-01-24 | Auburn University | Electrochemical detection nanostructure, systems, and uses thereof |
JP7158969B2 (ja) * | 2018-09-18 | 2022-10-24 | 株式会社東芝 | 有機物プローブおよび分子検出装置 |
WO2020072380A1 (fr) | 2018-10-01 | 2020-04-09 | Cellular Research, Inc. | Détermination de séquences de transcripts 5' |
US11932849B2 (en) | 2018-11-08 | 2024-03-19 | Becton, Dickinson And Company | Whole transcriptome analysis of single cells using random priming |
CN113195717A (zh) | 2018-12-13 | 2021-07-30 | 贝克顿迪金森公司 | 单细胞全转录组分析中的选择性延伸 |
US11661631B2 (en) | 2019-01-23 | 2023-05-30 | Becton, Dickinson And Company | Oligonucleotides associated with antibodies |
EP4004231A1 (fr) | 2019-07-22 | 2022-06-01 | Becton, Dickinson and Company | Dosage de séquençage par immunoprécipitation de la chromatine monocellulaire |
CN114729350A (zh) | 2019-11-08 | 2022-07-08 | 贝克顿迪金森公司 | 使用随机引发获得用于免疫组库测序的全长v(d)j信息 |
CN115244184A (zh) | 2020-01-13 | 2022-10-25 | 贝克顿迪金森公司 | 用于定量蛋白和rna的方法和组合物 |
US11661625B2 (en) | 2020-05-14 | 2023-05-30 | Becton, Dickinson And Company | Primers for immune repertoire profiling |
US11932901B2 (en) | 2020-07-13 | 2024-03-19 | Becton, Dickinson And Company | Target enrichment using nucleic acid probes for scRNAseq |
WO2022109343A1 (fr) | 2020-11-20 | 2022-05-27 | Becton, Dickinson And Company | Profilage de protéines hautement exprimées et faiblement exprimées |
WO2023192917A1 (fr) * | 2022-03-29 | 2023-10-05 | Nautilus Subsidiary, Inc. | Réseaux intégrés pour processus à analyte unique |
Family Cites Families (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5849486A (en) * | 1993-11-01 | 1998-12-15 | Nanogen, Inc. | Methods for hybridization analysis utilizing electrically controlled hybridization |
GB9212164D0 (en) * | 1992-06-09 | 1992-07-22 | Medical Res Council | Preparation of nucleic acids |
CA2262018C (fr) * | 1996-07-29 | 2007-10-02 | Nanosphere Llc | Nanoparticules sur lesquelles sont attaches des oligonucleotides et utilisations desdites nanoparticules |
EP0934082B1 (fr) * | 1996-10-23 | 2002-07-17 | SKW Trostberg Aktiengesellschaft | Procede de production de conjugues biologiquement actifs d'acides nucleiques et de nanoparticules polymeres |
US5900481A (en) * | 1996-11-06 | 1999-05-04 | Sequenom, Inc. | Bead linkers for immobilizing nucleic acids to solid supports |
US6287765B1 (en) * | 1998-05-20 | 2001-09-11 | Molecular Machines, Inc. | Methods for detecting and identifying single molecules |
AU2001232779A1 (en) * | 2000-01-24 | 2001-07-31 | Nanogen, Inc. | Systems and devices for photoelectrophoretic transport and hybridization of oligonucleotides |
-
2001
- 2001-08-10 EP EP01959723A patent/EP1362121A2/fr not_active Withdrawn
- 2001-08-10 AU AU2001281248A patent/AU2001281248A1/en not_active Abandoned
- 2001-08-10 CA CA002418502A patent/CA2418502A1/fr not_active Abandoned
- 2001-08-10 WO PCT/US2001/025237 patent/WO2002018643A2/fr active Application Filing
- 2001-08-10 JP JP2002522548A patent/JP2004525607A/ja active Pending
Also Published As
Publication number | Publication date |
---|---|
JP2004525607A (ja) | 2004-08-26 |
EP1362121A2 (fr) | 2003-11-19 |
WO2002018643A3 (fr) | 2003-09-04 |
WO2002018643A9 (fr) | 2003-11-06 |
AU2001281248A1 (en) | 2002-03-13 |
WO2002018643A2 (fr) | 2002-03-07 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
EEER | Examination request | ||
FZDE | Discontinued |