AR068526A1 - Metodos para identificar variaciones de secuencias de nucleotidos (polimorfismos o mutaciones) en sujetos poliploides mediante un metodo de secuenciacion terminado con un dideoxinucleotido trifosfato (ddntp) - Google Patents

Metodos para identificar variaciones de secuencias de nucleotidos (polimorfismos o mutaciones) en sujetos poliploides mediante un metodo de secuenciacion terminado con un dideoxinucleotido trifosfato (ddntp)

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Publication number
AR068526A1
AR068526A1 ARP080104101A ARP080104101A AR068526A1 AR 068526 A1 AR068526 A1 AR 068526A1 AR P080104101 A ARP080104101 A AR P080104101A AR P080104101 A ARP080104101 A AR P080104101A AR 068526 A1 AR068526 A1 AR 068526A1
Authority
AR
Argentina
Prior art keywords
polymorphisms
mutations
subjects
poliploid
phyloside
Prior art date
Application number
ARP080104101A
Other languages
English (en)
Inventor
Mathew James Hayden
Tania Tabone
Original Assignee
Molecular Plant Breeding Nominees Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Molecular Plant Breeding Nominees Ltd filed Critical Molecular Plant Breeding Nominees Ltd
Publication of AR068526A1 publication Critical patent/AR068526A1/es

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10Sequence alignment; Homology search
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Medical Informatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

Método para identificar un polimorfismo o una mutacion en un genoma de un sujeto poliploide, que comprende comparar las secuencias de un ácido nucleico blanco de los genomas de dos o más sujetos poliploides y determinar el ligamiento entre uno o más nucleotidos variables en las secuencias y uno o más nucleotidos en un genoma específico de un sujeto poliploide, identificando de esa manera un polimorfismo o una mutacion en un genoma de un sujeto poliploide. La presente solicitud provee un método para producir una sonda o un cebador que comprende una secuencia capaz de alinearse o hibridizarse preferentemente o específicamente con un ácido nucleico que comprende un polimorfismo o una mutacion identificada mediante el método de la presente. La presente solicitud también provee el uso del método para determinar variaciones en poblaciones, asociaciones entre polimorfismos o mutaciones y características específicas, y en el mejoramiento.
ARP080104101A 2008-04-04 2008-09-19 Metodos para identificar variaciones de secuencias de nucleotidos (polimorfismos o mutaciones) en sujetos poliploides mediante un metodo de secuenciacion terminado con un dideoxinucleotido trifosfato (ddntp) AR068526A1 (es)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US4254908P 2008-04-04 2008-04-04

Publications (1)

Publication Number Publication Date
AR068526A1 true AR068526A1 (es) 2009-11-18

Family

ID=41134718

Family Applications (1)

Application Number Title Priority Date Filing Date
ARP080104101A AR068526A1 (es) 2008-04-04 2008-09-19 Metodos para identificar variaciones de secuencias de nucleotidos (polimorfismos o mutaciones) en sujetos poliploides mediante un metodo de secuenciacion terminado con un dideoxinucleotido trifosfato (ddntp)

Country Status (2)

Country Link
AR (1) AR068526A1 (es)
WO (1) WO2009121091A1 (es)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101974629A (zh) * 2010-10-26 2011-02-16 西南大学 一种虚拟合成物种调查异源多倍体物种起源的方法
CN116779035B (zh) * 2023-05-26 2024-03-15 成都基因汇科技有限公司 多倍体转录组亚基因组分型方法及计算机可读存储介质
CN116403642B (zh) * 2023-06-06 2023-08-04 中国农业科学院作物科学研究所 一种qtl快速精细定位方法

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020187477A1 (en) * 2001-06-06 2002-12-12 Hong Xue Method for detecting single nucleotide polymorphisms (SNPs) and point mutations
AUPR882701A0 (en) * 2001-11-12 2001-12-06 Biogemma Novel isoamylase and associated methods and products
WO2005039389A2 (en) * 2003-10-22 2005-05-06 454 Corporation Sequence-based karyotyping
US8536429B2 (en) * 2006-07-12 2013-09-17 Commonwealth Scientific And Industrial Research Organisation Polynucleotides encoding a NAX2 polypeptide and methods for enhancing salinity tolerance in plants
WO2008025097A1 (en) * 2006-08-31 2008-03-06 Commonwealth Scientific And Industrial Research Organisation Salt tolerant plants

Also Published As

Publication number Publication date
WO2009121091A1 (en) 2009-10-08

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