WO2002044967A1 - Procede et systeme permettant de delivrer des informations d'analyse genetique et procede d'identification permettant une authentification - Google Patents
Procede et systeme permettant de delivrer des informations d'analyse genetique et procede d'identification permettant une authentification Download PDFInfo
- Publication number
- WO2002044967A1 WO2002044967A1 PCT/JP2000/008489 JP0008489W WO0244967A1 WO 2002044967 A1 WO2002044967 A1 WO 2002044967A1 JP 0008489 W JP0008489 W JP 0008489W WO 0244967 A1 WO0244967 A1 WO 0244967A1
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- WO
- WIPO (PCT)
- Prior art keywords
- gene
- information
- gene sequence
- analysis
- customer
- Prior art date
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Classifications
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
- G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
- G16H10/40—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for data related to laboratory analysis, e.g. patient specimen analysis
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
- G16H70/00—ICT specially adapted for the handling or processing of medical references
- G16H70/60—ICT specially adapted for the handling or processing of medical references relating to pathologies
Definitions
- the present invention relates to a method and system for providing gene analysis information, and a method for authenticating and identifying a gene donor utilizing these method and system.
- Japanese Patent Application Laid-Open No. 2000-60553 discloses a gene motif extraction processing apparatus, a gene motif extraction processing method, and a recording medium on which a gene motif extraction processing program is recorded.
- a data input section for inputting two gene sequence information a data editing section for performing various edits on the input gene sequence information and specifying a motif extraction range, etc., and an input gene sequence information or a designated motif extraction range.
- a motif extraction unit that automatically extracts gene motifs from the database; an extraction result processing unit that displays the extracted motifs and registers them in the motif database; and a gene array that partially includes the extracted motifs
- An object of the present invention is to supply genetic information for a long time in view of the characteristics of genetic information.
- the customer and the organization for gene management are linked by means of electronic information transmission such as internet, and further 1) means for securing the confidentiality of individuals , 2) Provision of step-by-step information according to the needs of customers (including medical institutions; the same applies hereinafter) 3) Long-term gene storage, a business form that provides information by adding the function of providing information as needed during that period Was devised.
- gene information in this case, information obtained by processing the obtained gene information
- the gene information provided is mainly based on the base sequence information of the gene chains that make up the genome, but information can also be provided by behavior comparison results of restriction enzyme cleavage fragments and the like.
- the nucleotide sequence is analyzed using a commonly used DNA analyzer.
- Various electrophoresis devices, DNA sequencers, and DNA chip analyzers are mainly used, but are not limited to these technologies.
- the gene base sequence Based on the information of the gene base sequence, it is compared with normal human gene information and polymorphism information to derive the characteristics of the customer's gene, evaluate its influence and mutation degree, and use it in the form desired by the customer. Provide an answer. Customers' requests first diverge based on the importance of obtaining information. ⁇ If the genetic information is related to the latest disease or treatment, consider a customer who wants to obtain the results immediately. Therefore, according to the easiness of gene analysis information and the length of time required for analysis, we set three levels of orders.
- the short term is set to about one month, and it is assumed that genes that can be analyzed within that range and that information can be provided. If information is needed in a short period of time, obtain prior information before receiving treatment, eliminate anxiety and fear about genes, and get pregnant It is assumed that information will be provided in response to genetic analysis, which can be performed in a short period of time, depending on the needs of the customer, such as eliminating concerns about the condition and genetic disease. Genomic DNA is stable and urgent information supply is rarely needed for diagnostics, but urgent needs of some customer needs.
- Long-term analysis does not merely analyze specific disease or gene characteristics and provide information, but analyzes the entire base sequence of the customer's gene, analyzes its characteristics, and analyzes its characteristics, and provides the customer with the genetic information. It is assumed to be provided. In the case of this course, it may take a long period of one year or more to obtain the full analysis results, and it is assumed that the sequential analysis results will be provided. In addition, if the elucidation of new genes progresses with the progress of genetic research, such long-term analysis can respond to customer requests for analysis.
- the fee is presented to the customer and executed if accepted.
- Gene DNA information is based on the sequence information of the four bases, and by discriminating the functional part of the gene from a certain part of this sequence, it is possible to clarify the genetic characteristics possessed by individuals and to provide genetic information Is the purpose. Genetic information has a large capacity, and it is best to use a widespread electronic information network such as the Internet to convey this to customers. This enables quick information transmission and facilitates two-way information communication. ⁇
- FIG. 1 is an information route diagram in the embodiment.
- FIG. 2 is a diagram showing the transition of the customer computer screen.
- FIG. 3 is a diagram showing an example of a customer identification access screen.
- FIG. 4 is a diagram showing an example of a provided service screen.
- FIG. 5 is a diagram showing a screen example of the short-term analysis menu.
- FIG. 6 is a diagram showing a screen example of the medium-term analysis menu.
- FIG. 7 is a diagram showing a screen example of the long-term analysis menu.
- FIG. 8 is a diagram showing an example of a screen of an information request menu.
- FIG. 9 is a diagram showing an example of an analysis order screen from a customer.
- FIG. 10 is a diagram showing a screen example of the analysis result.
- FIG. 11 is a diagram showing a screen example of the mediation / link information.
- FIG. 12 is an example of a screen showing an explanation for a customer.
- FIG. 13 is a diagram showing a payment method. BEST MODE FOR CARRYING OUT THE INVENTION
- FIG. 1 schematically illustrates an embodiment of the present invention.
- the mechanism that plays a central role is the genetic information access center 6, which is responsible for gene acquisition from customers, analysis, data storage, data transmission, analysis information provision, contact / mediation to medical institutions, etc. Everything is done in this organization. Information is communicated with customers through computerized computer networks and the Internet.
- Gene Information Access Center 6 a customer who wants to provide services, for example, a new customer 1 will provide the gene.
- the normal gene isolation method is performed by the method described in “Clinical Laboratory Gene and Chromosome Test Textbook” (edited by the Japan Society of Clinical Sanitary Engineers) (Modern Publishing, published in 1998).
- the reception section 3 of the genetic information access center performs the following work. Normally, the peripheral blood of the customer is collected using a syringe or the like, a buffer solution for lysing erythrocytes is added, and this is centrifuged at 300 rpm / min for 5 minutes using a centrifuge, and the supernatant is discarded.
- Reception department 3 melts a small amount of 5 to 10 grams of stored genes and analyzes them in order to accurately identify the genes of customers who want to analyze next. Cleavage into appropriate fragments with restriction enzymes, and adding a primer for personal identification, amplifies a DNA fragment containing a sequence for identification. ⁇ ⁇ ⁇ Amplify by the PCR method (Roche) etc. according to the conventional method as the width method, and read the base sequence. From such sequence information of gene fragments, it is desired to use the base sequence of a fragment having a large individual variation as an identification code.
- a discrimination code can be obtained by combining nucleotide sequence information of a plurality of short fragments.
- Example 1 identifies individuals with 4 A, T, G, or C alphabets.
- Examples 2 and 3 are identical twin gene passwords, but the X and Y alphabets were added at the end to distinguish them. In this way, the length of the password can be determined by selecting an appropriate mutation rate and a determination method that does not duplicate the base. If it is too long, it is difficult to memorize it, so you can use appropriate segmentation as in Example 4 or mix it with other symbols. Also, a combination of a plurality of passwords may be used. However, select the nucleotide sequence site to be used in the password so that there is no duplication.
- a method of analyzing genes and providing the information The process of transmitting information based on the customer's unique genetic information for information provision, collecting, separating, and storing the customer's genes.
- the process of conducting analysis when necessary the customer can select the analysis content stepwise and over time, receiving orders based on it, the process of transmitting the analysis results to the customer, the process of storing the customer's genetic information for a long time, the customer Establish an organization that implements a process for exchanging information with external institution 2 (for example, an external medical institution) in accordance with the requirements of A method for providing gene analysis information is configured.
- Gene information is composed of a DNA base sequence.
- the selection range for providing information should include the time required to obtain information, the type and number of analyzed genes, and ⁇ gene-related disease information.
- information transmission, analysis content selection, ordering, and billing (ordering, information provision, and billing) 9 are performed through an electronic network.
- the organization will issue a password to the customer, combining multiple base sequence symbols, for authentication and identification by the customer's gene.
- Genetic information access center 6 is the core organization of the present invention as described above. Gene exchange with customers, storage and analysis of genes, ⁇ ⁇ Orders for gene analysis ⁇ Result report, charge exchange, customer Manage genetic information of The communication between the customer 1 and the genetic information access center 6 and the exchange of information can be performed quickly and safely using a widely spread network such as the Internet. Since the organization manages genetic information, which is extremely important information for individuals, it is necessary to strictly manage information and genes. Only possible with the consent of the customer or with the permission of the requested manager. The Genetic Information Access Center issues a password based on the unique genetic information of the customer, and after confirming it, moves on to analysis (save and order analysis).
- Genetic DNA provided by customers can be stored stably for a long period of time if the contact with degrading enzymes is cut off, and it can withstand customers' long-term requests for providing genetic information. It is also possible to obtain an overall picture of an individual's genetic information by connecting the genetic information obtained over time.
- the diseases analyzed are as follows. Phenylketonuria, sickle cell anemia, 1 antitrypsin deficiency, citrullinemia, hemophilia, von Villebrand disease, antithrombin III disorder, urea cycle enzyme deficiency Disease, alginosuccinic aciduria, glycogenosis, mucopolysaccharidosis, gothic disease, T.
- ⁇ Also single nucleotide polymorphisms of genes that are said to be related to constitution, side effects of drugs, etc.
- Very little information about type SNP (single nucleotide polymorphism) is currently known to be associated with disease, but if it can be provided as genetic information, it will be effective in treating the disease of customers. Because genetic information influences the biological function of a human over the life of the human, it is also important to provide the genetic information needed at each stage of life.
- Long-term analysis requests can also respond to customer requests to clarify the genetic characteristics of individuals that are not directly related to the disease.
- the Genetic Information Access Center provides customers with profession, age, gender, pre-existing medical history, Based on various factors, such as environmental information, additional information may be added to the results of gene analysis for the purpose of preventing disease.
- the distinction between short-term, medium-term and long-term is also a relative division, and depending on the gene, the period may change for a given period.
- the analysis menu may be updated frequently.
- Passwords for customer identification are essential for confidentiality. Although it is possible to specify an arbitrary password, in the present invention, a password determined from a customer's gene is used so that the person can be surely recognized.
- a password is basically a personal identification code composed of four alphabets, A, T, G, and C, which are abbreviations of bases. The more digits, the more unique the password. However, it is difficult to discriminate between siblings with very similar or identical twins or more. In such a case, it is sufficient to add an alphabet for further distinction. It is desirable to determine which gene sequence site is to be a pass-side sequence depending on the mutation probability. Select multiple base sequences, including those around the sequences with extremely high base variation for each individual-create a password.
- a password different for each individual can be determined by selecting the same gene sequence site for many subjects. In this way, if the password contains the individual's genetic report, it is difficult to decode it. It becomes difficult and confidentiality becomes easy. Before issuing, make sure that there is no duplication with the existing gene password.
- FIG. 2 is a diagram showing the transition of the customer computer screen by the registered customer personal computer 7.
- the selection course screen 13 is displayed such that the selection menu screen 12 appears from the registration screen 11.
- Request analysis by referring to the gene description screen 15 ⁇ Request analysis from the order screen 14 ⁇ Place an order.
- Payment condition ⁇ Result report condition
- the customer confirmation and collation work shown in Fig. 3 is performed first, and when confirmation is completed, the menu screen of the gene analysis service is next displayed. Appear. Next, the display of the selected course as shown in Fig. 4 appears. This course includes gradual (chronological) short-term analysis requests (within 1 month), medium-term analysis requests (within 6 months) and long-term analysis requests (within 1 year). As described above, in the case of gene analysis, three steps are preferable, but two steps may be used.
- the genetic information access center 6 clarifies the analysis contents desired by the customer with reference information with reference to FIGS. 5 to 8 so that the customer can make a selection.
- the Genetic Information Access Center 6 responds to customer questions and requests via the Internet. Estimated cost estimates are shown on the customer access screen based on the selected time period, analysis request, and reporting frequency ( Figure 9). After informing the customer of the analysis, a consent screen is presented. Billing is determined by the following factors Is done. 1) Selection period (short term, middle term, long term), 2) Number of genes to be analyzed, 3) Difficulty of analysis gene, 3) Mutation status, 4) Information usage period, 5) Access center usage frequency, 5) Additional information (Including mediation / introduction), etc., and are determined by the following addition method.
- T [A (m l + m 20... + mX) + B (n l + n 20... + nX) + C
- A, B, and C are the basic rates of charge according to the period course
- mX, nX, p X Indicates the basic fee for each gene to be analyzed in each course.
- D indicates the basic fee for information provision, and tX indicates the individual information fee.
- E is another service fee regardless of the number of times.
- L is the information provision period, and T is the total amount of billing per unit period.
- payment and collection of charges can be digitized through networks such as the Internet.
- the provision of information is, of course, not limited to the above, and may be added or changed.
- the gene access center makes a plan to analyze the storage gene and carries out the analysis work.
- the analysis work is started. Based on the content selected and requested, the obtained result is reported to the customer in the form shown in Figure 10.
- the company will refer to the medical institution and provide new relevant information to the medical institution with the consent of the customer ( Figure 11 1).
- Gene Information Access Center 6 the genetic information of individuals obtained by the above method is stored for a long period of time.
- the names and base sequences of the genes are stored on a magnetic storage medium such as a computer hard disk, MO, or compact disk, and all are protected with a personal identification password.
- the information department of the genetic information access center manages information and communicates with customers. It performs access management and management of genetic information in the access center.
- the services received by customers are divided into various stages according to the period, the degree of difficulty of the required gene information, and the frequency of use, and the charges vary accordingly.
- the customer order system is configured so that the customer can freely select according to the information he or she wants, the estimated amount of billing, etc., and can adopt all the information provision bag methods.
- Figure 13 shows the payment method.
- a customer 1 ie, a gene provider
- this billing request is based on a three-stage analysis, but in the case of a comprehensive contract, a uniform price may be set.
- the customer 1 makes a payment from the registered customer computer 7 to the genetic information access center 6 via the financial institution / credit company 100.
- a process of collecting, isolating and storing a customer's gene a process of performing a step-by-step selection of gene sequence analysis content by a customer, receiving an order for gene sequence analysis based on the selection, and charging
- a process of requesting payment and transmitting the gene sequence information to the customer providing and storing the stored and stored gene sequence information to the customer or an external organization, subject to the storage and storage process and the request from the customer
- the present invention provides a method for providing genetic analysis information, which comprises all or a combination thereof.
- a process of setting the gene sequence content in at least three stages and setting a fee corresponding to the stage a process in which the customer makes a stepwise selection of the gene sequence analysis content, and a sequence of the gene sequence based on the selection
- a method for providing genetic analysis information comprising all or a combination of the steps of providing to an institution.
- the customer's step-by-step selection depends on the type and number of genes, Information.
- the gene sequence can be a DNA base sequence.
- a receiving unit for collecting, separating, and storing at least one gene
- an input unit for inputting stepwise selection of the gene sequence analysis content, and information on ordering of gene sequence analysis based on the selection.
- a processing unit for charging and paying bills corresponding to the selected stage
- a storage unit for storing gene sequence information.
- a processing computer comprising: an input unit for inputting stepwise selection of gene sequence analysis content; an order information input unit for inputting order information for gene sequence analysis based on the selection; and a storage unit for storing gene sequence information.
- the computer is provided with a system for providing gene analysis information for issuing a password consisting of a gene base sequence symbol corresponding to the step.
- the passcode is created by combining a plurality of gene base sequence symbols.
- a step of inputting stepwise selection of gene sequence analysis content a step of inputting order information for gene sequence analysis based on the selection; a step of accumulating gene sequence information;
- a method for providing gene analysis information comprising: combining a plurality of gene base sequence symbols to issue a password for authentication and identification corresponding to the selected step.
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Description
Claims
Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
JP2002547064A JPWO2002044967A1 (ja) | 2000-11-30 | 2000-11-30 | 遺伝子解析情報の提供方法およびシステム並びに認証識別方法 |
EP00978042A EP1345137A4 (en) | 2000-11-30 | 2000-11-30 | METHOD AND SYSTEM FOR DELIVERING GENETIC ANALYSIS INFORMATION AND IDENTIFICATION METHOD FOR AUTHENTICATION |
PCT/JP2000/008489 WO2002044967A1 (fr) | 2000-11-30 | 2000-11-30 | Procede et systeme permettant de delivrer des informations d'analyse genetique et procede d'identification permettant une authentification |
US10/432,932 US20050069874A1 (en) | 2000-11-30 | 2000-11-30 | Method and system for offering gene analysis information and autentication identification method |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
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PCT/JP2000/008489 WO2002044967A1 (fr) | 2000-11-30 | 2000-11-30 | Procede et systeme permettant de delivrer des informations d'analyse genetique et procede d'identification permettant une authentification |
Publications (1)
Publication Number | Publication Date |
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WO2002044967A1 true WO2002044967A1 (fr) | 2002-06-06 |
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Family Applications (1)
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PCT/JP2000/008489 WO2002044967A1 (fr) | 2000-11-30 | 2000-11-30 | Procede et systeme permettant de delivrer des informations d'analyse genetique et procede d'identification permettant une authentification |
Country Status (4)
Country | Link |
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US (1) | US20050069874A1 (ja) |
EP (1) | EP1345137A4 (ja) |
JP (1) | JPWO2002044967A1 (ja) |
WO (1) | WO2002044967A1 (ja) |
Cited By (8)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2004077334A1 (ja) * | 2003-02-27 | 2004-09-10 | Hitachi, Ltd. | 塩基配列関連情報を用いた情報処理システム |
JP2006048423A (ja) * | 2004-08-05 | 2006-02-16 | Sanyo Electric Co Ltd | ヘルスケアサービス提供システム |
JPWO2004046997A1 (ja) * | 2002-11-20 | 2006-03-16 | 株式会社日立製作所 | 塩基配列関連情報を用いた情報処理システム |
JPWO2004046996A1 (ja) * | 2002-11-18 | 2006-03-16 | 株式会社日立製作所 | 塩基配列関連情報を用いた情報処理システム |
JP2008139924A (ja) * | 2006-11-30 | 2008-06-19 | Tamotsu Koyama | 記憶ストックシステム |
WO2016151702A1 (ja) * | 2015-03-20 | 2016-09-29 | 株式会社日立製作所 | 遺伝子調査対象抽出方法およびシステム |
CN107301332A (zh) * | 2011-10-17 | 2017-10-27 | 英特托拉斯技术公司 | 用于保护和管理基因组及其它信息的系统和方法 |
US9953137B2 (en) | 2012-07-06 | 2018-04-24 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
Families Citing this family (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2005088504A1 (en) * | 2004-03-17 | 2005-09-22 | Fidelitygenetic Limited | Secure transaction of dna data |
CN112614545B (zh) * | 2020-12-29 | 2022-11-01 | 暨南大学 | 一种支持多属性匿名认证的基因序列安全比对方法及系统 |
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- 2000-11-30 US US10/432,932 patent/US20050069874A1/en not_active Abandoned
- 2000-11-30 EP EP00978042A patent/EP1345137A4/en not_active Withdrawn
- 2000-11-30 JP JP2002547064A patent/JPWO2002044967A1/ja active Pending
- 2000-11-30 WO PCT/JP2000/008489 patent/WO2002044967A1/ja not_active Application Discontinuation
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Cited By (14)
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JPWO2004046996A1 (ja) * | 2002-11-18 | 2006-03-16 | 株式会社日立製作所 | 塩基配列関連情報を用いた情報処理システム |
JPWO2004046997A1 (ja) * | 2002-11-20 | 2006-03-16 | 株式会社日立製作所 | 塩基配列関連情報を用いた情報処理システム |
WO2004077334A1 (ja) * | 2003-02-27 | 2004-09-10 | Hitachi, Ltd. | 塩基配列関連情報を用いた情報処理システム |
JP2006048423A (ja) * | 2004-08-05 | 2006-02-16 | Sanyo Electric Co Ltd | ヘルスケアサービス提供システム |
JP2008139924A (ja) * | 2006-11-30 | 2008-06-19 | Tamotsu Koyama | 記憶ストックシステム |
CN107301332A (zh) * | 2011-10-17 | 2017-10-27 | 英特托拉斯技术公司 | 用于保护和管理基因组及其它信息的系统和方法 |
CN107301332B (zh) * | 2011-10-17 | 2021-10-29 | 英特托拉斯技术公司 | 用于保护和管理基因组及其它信息的系统和方法 |
US11481729B2 (en) | 2011-10-17 | 2022-10-25 | Intertrust Technologies Corporation | Systems and methods for protecting and governing genomic and other information |
US9953137B2 (en) | 2012-07-06 | 2018-04-24 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
US10055546B2 (en) | 2012-07-06 | 2018-08-21 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
US10095835B2 (en) | 2012-07-06 | 2018-10-09 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
US10580523B2 (en) | 2012-07-06 | 2020-03-03 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
US10957429B2 (en) | 2012-07-06 | 2021-03-23 | Nant Holdings Ip, Llc | Healthcare analysis stream management |
WO2016151702A1 (ja) * | 2015-03-20 | 2016-09-29 | 株式会社日立製作所 | 遺伝子調査対象抽出方法およびシステム |
Also Published As
Publication number | Publication date |
---|---|
JPWO2002044967A1 (ja) | 2004-04-02 |
US20050069874A1 (en) | 2005-03-31 |
EP1345137A4 (en) | 2006-11-02 |
EP1345137A1 (en) | 2003-09-17 |
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