TW200730825A - Method and apparatus for correlating levels of biomarker products with disease - Google Patents
Method and apparatus for correlating levels of biomarker products with diseaseInfo
- Publication number
- TW200730825A TW200730825A TW095138974A TW95138974A TW200730825A TW 200730825 A TW200730825 A TW 200730825A TW 095138974 A TW095138974 A TW 095138974A TW 95138974 A TW95138974 A TW 95138974A TW 200730825 A TW200730825 A TW 200730825A
- Authority
- TW
- Taiwan
- Prior art keywords
- colorectal
- products
- test individual
- disease
- pathologies
- Prior art date
Links
- 239000000090 biomarker Substances 0.000 title abstract 3
- 238000000034 method Methods 0.000 title abstract 3
- 201000010099 disease Diseases 0.000 title 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 title 1
- 230000007170 pathology Effects 0.000 abstract 6
- 238000012360 testing method Methods 0.000 abstract 3
- 206010009944 Colon cancer Diseases 0.000 abstract 1
- 208000001333 Colorectal Neoplasms Diseases 0.000 abstract 1
- 238000012544 monitoring process Methods 0.000 abstract 1
- 238000010998 test method Methods 0.000 abstract 1
- 230000001225 therapeutic effect Effects 0.000 abstract 1
- 238000011282 treatment Methods 0.000 abstract 1
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/30—Detection of binding sites or motifs
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/50—Mutagenesis
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- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
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- G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
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- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/10—Signal processing, e.g. from mass spectrometry [MS] or from PCR
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- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/20—Supervised data analysis
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/30—Unsupervised data analysis
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
- G16B5/20—Probabilistic models
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- G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
- G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
- G16H50/30—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for calculating health indices; for individual health risk assessment
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/112—Disease subtyping, staging or classification
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/136—Screening for pharmacological compounds
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/158—Expression markers
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
- Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Medical Informatics (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Evolutionary Biology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Theoretical Computer Science (AREA)
- Molecular Biology (AREA)
- Chemical & Material Sciences (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Analytical Chemistry (AREA)
- Data Mining & Analysis (AREA)
- Public Health (AREA)
- Epidemiology (AREA)
- Databases & Information Systems (AREA)
- Organic Chemistry (AREA)
- Pathology (AREA)
- Software Systems (AREA)
- Evolutionary Computation (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Bioethics (AREA)
- Artificial Intelligence (AREA)
- Immunology (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Physiology (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Oncology (AREA)
- Biochemistry (AREA)
- Hospice & Palliative Care (AREA)
- Signal Processing (AREA)
- Probability & Statistics with Applications (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US72905505P | 2005-10-21 | 2005-10-21 | |
| US75841806P | 2006-01-12 | 2006-01-12 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| TW200730825A true TW200730825A (en) | 2007-08-16 |
Family
ID=37734038
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| TW095138974A TW200730825A (en) | 2005-10-21 | 2006-10-23 | Method and apparatus for correlating levels of biomarker products with disease |
Country Status (9)
| Country | Link |
|---|---|
| US (4) | US8239136B2 (https=) |
| EP (2) | EP1945816B1 (https=) |
| JP (2) | JP5237817B2 (https=) |
| CN (2) | CN101370946B (https=) |
| AT (1) | ATE518007T1 (https=) |
| AU (2) | AU2006304883A1 (https=) |
| CA (1) | CA2626604A1 (https=) |
| TW (1) | TW200730825A (https=) |
| WO (1) | WO2007048074A1 (https=) |
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| AU2006304883A1 (en) * | 2005-10-21 | 2007-04-26 | Genenews Inc. | Method and apparatus for correlating levels of biomarker products with disease |
| JP4661640B2 (ja) * | 2006-03-09 | 2011-03-30 | 株式会社日立製作所 | 空調制御システム |
| EP1849878A1 (en) * | 2006-04-24 | 2007-10-31 | DKFZ Deutsches Krebsforschungszentrum | Means and methods for diagnosing and treating cancer based on the frmd3 gene |
| US20080228700A1 (en) | 2007-03-16 | 2008-09-18 | Expanse Networks, Inc. | Attribute Combination Discovery |
| WO2008121239A1 (en) * | 2007-03-29 | 2008-10-09 | Response Biomedical Corporation | Modular assay reader system and apparatus |
| AU2008300338A1 (en) | 2007-06-04 | 2009-03-26 | Diagnoplex | Biomarker combinations for colorectal cancer |
| EP2215112A1 (en) * | 2007-11-26 | 2010-08-11 | Merck Serono S.A. | Novel bank1 splice variant |
| US8921074B2 (en) | 2008-04-10 | 2014-12-30 | Genenews, Inc. | Method and apparatus for determining a probability of colorectal cancer in a subject |
| US8108406B2 (en) | 2008-12-30 | 2012-01-31 | Expanse Networks, Inc. | Pangenetic web user behavior prediction system |
| US8463554B2 (en) | 2008-12-31 | 2013-06-11 | 23Andme, Inc. | Finding relatives in a database |
| CA2749869A1 (en) * | 2009-03-03 | 2010-09-10 | Merck Serono S.A. | Bank1 related snps and sle and/or ms susceptibility |
| CN102549014A (zh) * | 2009-10-02 | 2012-07-04 | 学校法人东京女子医科大学 | 人血清淀粉样蛋白a3抗体及其应用 |
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| EP2388336A1 (en) | 2010-05-19 | 2011-11-23 | Signature Diagnostics AG | Method and kits for diagnosing colorectal cancer |
| US11559540B2 (en) | 2010-07-28 | 2023-01-24 | Janssen Pharmaceutica Nv | Method of determining acute myeloid leukemia response to treatment with farnesyltransferase inhibitors |
| CA2806112C (en) * | 2010-07-28 | 2023-03-21 | Veridex, Llc | Methods of determining acute myeloid leukemia response to treatment with farnesyltransferase inhibitors |
| US9208405B2 (en) | 2010-08-06 | 2015-12-08 | Sony Corporation | Systems and methods for digital image analysis |
| KR20130131371A (ko) * | 2010-12-17 | 2013-12-03 | 에프. 호프만-라 로슈 아게 | 정량적 샘플 분석을 위한 분리 및 검출 처리의 복수의 장치들을 자동으로 제어하는 방법 |
| JP2014509189A (ja) | 2011-01-25 | 2014-04-17 | アルマック ダイアグノスティックス リミテッド | 結腸ガン遺伝子発現シグネチャーおよび使用方法 |
| EP2524967A1 (en) * | 2011-05-19 | 2012-11-21 | Signature Diagnostics AG | Methods and kits for diagnosing colorectal cancer |
| EP2524968A1 (en) * | 2011-05-19 | 2012-11-21 | Signature Diagnostics AG | Methods and kits for diagnosing colorectal cancer |
| WO2013045464A1 (en) * | 2011-09-26 | 2013-04-04 | Roche Diagnostics Gmbh | Cdna biomarkers in whole blood for colorectal cancer assessment |
| CA2852098C (en) * | 2011-10-21 | 2023-05-02 | Chronix Biomedical | Colorectal cancer associated circulating nucleic acid biomarkers |
| WO2013102187A1 (en) * | 2011-12-29 | 2013-07-04 | The Brigham And Women's Hospital Corporation | Methods and compositions for diagnosing and treating cancer |
| DE102012209059B4 (de) | 2012-05-30 | 2024-05-02 | Siemens Healthineers Ag | Verfahren und Vorrichtung zur Bestimmung einer zeitlichen Änderung eines Biomarkers in einem Untersuchungsgebiet |
| TWI485252B (zh) * | 2012-09-17 | 2015-05-21 | Cathay General Hospital | 一種以糞便中細胞基因套組偵測大腸直腸癌可能性的方法 |
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| JP6270221B2 (ja) * | 2015-02-13 | 2018-01-31 | 国立研究開発法人産業技術総合研究所 | バイオマーカー探索方法、バイオマーカー探索装置、及びプログラム |
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| US20200190585A1 (en) * | 2017-02-15 | 2020-06-18 | Checkpoint Sciences, Inc. | Data Processing and Classification for Determining a Likelihood Score for Immune-Related Adverse Events |
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| NL154598B (nl) | 1970-11-10 | 1977-09-15 | Organon Nv | Werkwijze voor het aantonen en bepalen van laagmoleculire verbindingen en van eiwitten die deze verbindingen specifiek kunnen binden, alsmede testverpakking. |
| US3817837A (en) | 1971-05-14 | 1974-06-18 | Syva Corp | Enzyme amplification assay |
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| US3996345A (en) | 1974-08-12 | 1976-12-07 | Syva Company | Fluorescence quenching with immunological pairs in immunoassays |
| US4016043A (en) | 1975-09-04 | 1977-04-05 | Akzona Incorporated | Enzymatic immunological method for the determination of antigens and antibodies |
| US4196265A (en) | 1977-06-15 | 1980-04-01 | The Wistar Institute | Method of producing antibodies |
| US4277437A (en) | 1978-04-05 | 1981-07-07 | Syva Company | Kit for carrying out chemically induced fluorescence immunoassay |
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-
2006
- 2006-10-23 AU AU2006304883A patent/AU2006304883A1/en not_active Abandoned
- 2006-10-23 CA CA002626604A patent/CA2626604A1/en not_active Abandoned
- 2006-10-23 US US11/585,666 patent/US8239136B2/en not_active Expired - Fee Related
- 2006-10-23 CN CN2006800488076A patent/CN101370946B/zh not_active Expired - Fee Related
- 2006-10-23 WO PCT/US2006/041600 patent/WO2007048074A1/en not_active Ceased
- 2006-10-23 EP EP06836517A patent/EP1945816B1/en not_active Not-in-force
- 2006-10-23 AT AT06836517T patent/ATE518007T1/de not_active IP Right Cessation
- 2006-10-23 JP JP2008536621A patent/JP5237817B2/ja not_active Expired - Fee Related
- 2006-10-23 CN CN2011101964034A patent/CN102260742A/zh active Pending
- 2006-10-23 TW TW095138974A patent/TW200730825A/zh unknown
- 2006-10-23 US US12/091,049 patent/US8249814B2/en not_active Expired - Fee Related
- 2006-10-23 EP EP11150414A patent/EP2319941A3/en not_active Withdrawn
-
2012
- 2012-08-03 US US13/566,394 patent/US20130013214A1/en not_active Abandoned
-
2013
- 2013-02-25 JP JP2013034252A patent/JP2013150612A/ja not_active Ceased
- 2013-05-16 AU AU2013205891A patent/AU2013205891A1/en not_active Abandoned
-
2015
- 2015-01-14 US US14/597,200 patent/US20150191796A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| US20150191796A1 (en) | 2015-07-09 |
| CN101370946B (zh) | 2011-07-20 |
| US8249814B2 (en) | 2012-08-21 |
| US20130013214A1 (en) | 2013-01-10 |
| AU2006304883A1 (en) | 2007-04-26 |
| CN102260742A (zh) | 2011-11-30 |
| WO2007048074A1 (en) | 2007-04-26 |
| JP2009512440A (ja) | 2009-03-26 |
| EP1945816A1 (en) | 2008-07-23 |
| CN101370946A (zh) | 2009-02-18 |
| US20090208942A1 (en) | 2009-08-20 |
| ATE518007T1 (de) | 2011-08-15 |
| US20070213939A1 (en) | 2007-09-13 |
| EP1945816B1 (en) | 2011-07-27 |
| EP2319941A3 (en) | 2011-08-17 |
| CA2626604A1 (en) | 2007-04-26 |
| US8239136B2 (en) | 2012-08-07 |
| EP2319941A2 (en) | 2011-05-11 |
| AU2013205891A1 (en) | 2013-06-06 |
| JP5237817B2 (ja) | 2013-07-17 |
| JP2013150612A (ja) | 2013-08-08 |
| HK1128310A1 (en) | 2009-10-23 |
| WO2007048074B1 (en) | 2007-06-28 |
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