TR201809128T4 - Gram-pozitif bakterilere spesifik bağlanan bileşikler. - Google Patents
Gram-pozitif bakterilere spesifik bağlanan bileşikler. Download PDFInfo
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- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/5005—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
- G01N33/5091—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing the pathological state of an organism
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- C07K16/1271—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from bacteria from Gram-positive bacteria from Micrococcaceae (F), e.g. Staphylococcus
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- C07K2317/20—Immunoglobulins specific features characterized by taxonomic origin
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- C07K2317/567—Framework region [FR]
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Abstract
Bu buluş, Gram-pozitif bakterilere spesifik olarak bağlanabilen gelişmiş bağlanma bileşikleri ortaya koymaktadır. Tamamen insan menşeli olup bu sayede insanlara yönelik terapötik uygulamalarda kullanılabilecek olan bağlanma bileşikleri sunulmaktadır.
Claims (2)
1. Bir Staphylococcus türüne baglanma kabiliyetine sahip olan ve asagida belirtilenleri içeren bir izole antikor veya onun bir 5 fonksiyonel parçasi: (a) bir agir zincir CDRl sekansi olan RFAMS (SEKANS KOD NO.: 1), ve (b) bir agir zincir CDR2 sekansi olan 10 SINNGNNPYYARSVQY (SEKANS KOD NO.: 2), ve (c) bir agir zincir CDR3 sekansi olan DHPSSGWPTFDS (SEKANS KOD NO.: 3), ve ((1) bir hafif zincir CDRl sekansi olan RASENVGDWLA (SEKANS KOD NO.: 4), ve 15 (e) bir hafif zincir CDR2 sekansi olan KTSILES (SEKANS KOD NO.: 5), ve (I) bir hafif zincir CDR3 sekansi olan X'in I veya M oldugu QHYXRFPYT (SEKANS KOD NO.: 6). 20
2. Istem l'e uygun antikor veya onun fonksiyonel parçasi olup, burada antikor veya onun fonksiyonel parçasi asagida belirtilenleri (i) asagida belirtilenleri içeren bir agir zincir degisken 25 domain sekansi: (a) EVQLLESGGGLVQPGGSLRLSCAASGFTL S (SEKANS KOD NO.: 38) sekansina sahip olan çerçeve l (FW1); (b) WVRQAPGRGLEWVA (SEKANS KOD NO.: 40) sekansina sahip olan çerçeve 2 (FW2); (c) RFTVSRDVSQNTVSLQMNNLRAEDSATYF CAK (SEKANS KOD NO.: 42) sekansina sahip olan çerçeve 3 (FW3); ve (d) WGPGTLVTVSS (SEKANS KOD NO.: 44) sekansina sahip olan çerçeve 4 (FW4); (ii) asagida belirtilenleri içeren bir hafif zincir degisken domain sekansi: (a) DIQLTQSPSALPASVGDRVSITC (SEKANS KOD NO.: 48) sekansina sahip olan çerçeve 1 (b) WYRQKPGKAPNLLIY (SEKANS KOD NO.: 50) sekansina sahip olan çerçeve 2 (FW2); (C) GVPSRFSGSGSGTEFTLTISSLQPDDFATYY C (SEKANS KOD NO.: 52) sekansina sahip olan çerçeve 3 (FW3); ve (d) FGQGTKLEIKRTV (SEKANS KOD NO.: 54) sekansina sahip olan çerçeve 4 (FW4); veya (a) DIQLTQSPSALPASVGDRVSITC (SEKANS KOD NO.: 48) sekansina sahip olan çerçeve l (b) WYRQKPGKAPNLLIY (SEKANS KOD NO.: 50) sekansina sahip olan çerçeve 2 (FW2); (c) GVPSRFSGSGSGTEFTLTISSLQPDDFATYY C (SEKANS KOD NO.: 52) sekansina sahip olan çerçeve 3 (FW3); ve (d) FGQGTKVEIKRTV (SEKANS KOD NO.: 59) sekansina sahip olan çerçeve 4 (FW4). Istem l'e uygun antikor veya oiiun fonksiyonel parçasi olup, burada antikor veya onun fonksiyonel parçasi asagida belirtilenleri içerir: (i) EVQLLESGGGLVQPGGSLRLSCAASGFTLSRFA MSWVRQAPGRGLEWVASINNGNNPYYARSVQYR FTVSRDVSQNTVSLQMNNLRAEDSATYFCAKDHPS SGWPTFDSWGP GTLVTVSS (SEKANS KOD NO.: 7) sekansi ile en az %70 oraninda sekans özdesligine sahip olan bir sekans içeren bir agir zincir degisken domain sekansi; (ii) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDWLAW YRQKPGKAPNLLIYKTSILESGVPSRFSGSGSGTEFT LTISSLQPDDFATYYCQHYXRFPYTFGQGTKLEIKR TV (SEKANS KOD NO.: 8) sekansi ile en az %70 oraninda sekans özdesligine sahip olan bir sekans içeren bir hafif zincir degisken domain sekansi. Istem 3 ”e uygun antikor veya onun fonksiyonel parçasi olup, burada antikor veya onun fonksiyonel parçasi EVQLLESGGGLVQPGGSLRLSCAASGFTLSRFAMSWVR QAPGRGLEWVASINNGNNPYYARSVQYRFTVSRDVSQN TVSLQMNNLRAEDSATYFCAKDHPSSGWPTFDSWGP GTLVTVSS (SEKANS KOD NO.: 7) sekansina sahip olan bir agir zincir degisken domaini içerir burada antikor vay onun fonksiyonel parçasi X'in 1 veya M DIQLTQSPSALPASVGDRVSITCRASENVGDWLAWYRQK PGKAPNLLIYKTSILESGVPSRFSGSGSGTEFTLTISSLQPD DFATYYCQHYXRFPYTFGQGTKVEIKRTV (SEKANS KOD NO.: 1 l) sekansina sahip olan bir hafif zincir degisken domaini içerir. Istem l'e uygun bir izole antikor veya onun fonksiyonel parçasi burada söz konusu antikor veya onun fonksiyonel parçasi istege bagli olarak insan kaynaklidir, ve burada Staphylococcus türü istege bagli olarak bir metisiline dirençli S. aureus (MRSA) veya bir inetisiline duyarli S. aureus (MSSA) veya bir vankomisine orta düzeyde duyarli S. aureus (VISA)°dir ve burada antikor veya bunun fonksiyonel parçasi asagida belirtilenlerden birini içerir: (a) EVQLLESGGGLVQPGGSLRLSCAASGFTL SRFAMSWVRQAPGRGLEWVASINNGNN PYYARSVQYRFTVSRDVSQNTVSLQMNN LRAEDSATYFCAKDHPSSGWPTFDSWGP GTLVTVSS (SEKANS KOD NO.: 7) sekansini içeren bir agir zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGVPSRFSG SGSGTEFTLTISSLQPDDFATYYCQHYXRFPY TFGQGTKVEIKRTV (SEKANS KOD NO.: 1 1) sekansini içeren bir hafif zincir degisken domaini; (a) EVQLVESGGGLVQPGGSLRLSCAASGFTL SRFAMSWVRQAPGRGLEWVASINNGNNP YYARSVQYRFTVSRDVSQNTVSLQMNNL RAEDSATYFCAKDHPSSGWPTFDSWGPGT LVTVSS (SEKANS KOD NO.: 9) sekansini içeren bir agir zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGV PSRFSGSGSGTEFTLTISSLQPDDFATYYCQHY XRFPYTFGQGTKLEIKRTV (SEKANS KOD NO 8) sekansini içeren bir hafif zincir degisken domaini; veya (a) EVQLVESGGGLVQPGGSLRLSCAASGFTL SRFAMSWVRQAPGRGLEWVASINNGNNP YYARSVQYRFTVSRDVSQNTVSLQMNNL RAEDSATYFCAKDHPSSGWPTFDSWGPGT LVTVSS (SEKANS KOD NO.: 9) sekansini içeren bir agir Zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGV PSRFSGSGSGTEFTLTISSLQPDDFATYYCQHY XRFPYTFGQGTKLEIKRA (SEKANS KOD NO.: 10) sekansini içeren bir hafif zincir degisken domaini; veya (21) EVQLVESGGGLVQPGGSLRLSCAASGFTL SRFAMSWVRQAPGRGLEWVASINNGNNP YYARSVQYRFTVSRDVSQNTVSLQMNNL RAEDSATYFCAKDHPSSGWPTFDSWGPGT LVTVSS (SEKANS KOD NO.: 9) sekansini içeren bir agir zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGV PSRFSGSGSGTEFTLTISSLQPDDFATYYCQHY XRFPYTFGQGTKVEIKRTV (SEKANS KOD NO.: 11) sekansini içeren bir hafif zincir degisken domaini; veya (21) EVQLLESGGGLVQPGGSLRLSCAASGFTL SRFAMSWVRQAPGRGLEWVASINNGNNP YYARSVQYRFTVSRDVSQNTVSLQMNNL RAEDSATYFCAKDHPSSGWPTFDSWGPGT LVTVSS (SEKANS KOD NO.: 7) sekansini içeren bir agir zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGV PSRFSGSGSGTEFTLTISSLQPDDFATYYCQHY XRFPYTFGQGTKLEIKRTV (SEKANS KOD NO 8) sekansini içeren bir hafif zincir degisken domaini; veya (a) EVQLLESGGGLVQPGGSLRLSCAASGF TL SRFAMSWVRQAPGRGLEWVASINNGNNP YYARSVQYRFTVSRDVSQNTVSLQMNNL RAEDSATYFCAKDHPSSGWPTFDSWGPGT LVTVSS (SEKANS KOD NO.: 7) sekansini içeren bir agir zincir degisken domaini; (b) burada X'in 1 veya M oldugu DIQLTQSPSALPASVGDRVSITCRASENVGDW LAWYRQKPGKAPNLLIYKTSILESGV PSRFSGSGSGTEFTLTISSLQPDDFATYYCQHY XRFPYTFGQGTKLEIKRA (SEKANS KOD NO.: 10) sekansiiii içeren bir hafif zincir degisken domaini.
6. Asagida belirtilenleri içeren, istem l'e uygun bir izole antikor veya onun bir fonksiyonel parçasi: (a) SEKANS KOD NO.: 55 sekansini içeren bir agir zincir (Sekil 9A, rFl agir zinciri); ve (b) SEKANS KOD NO.: 57 sekansini içeren bir hafif zincir (Sekil 9B, rFl hafif zinciri).
7. Bir Staphylococcus türüne baglanma kabiliyetine sahip olan ve asagida belirtilenleri içeren ve asagidaki (i), (ii) ve (iii) sayili maddelerden herhangi birinde belirtilen ainino asit ikame(1er)ini bünyesinde barindiran bir izole antikor veya onun bir fonksiyonel parçasi: (a) bir agir zincir CDRl sekansi olan RFAMS (SEKANS KOD NO.: 1), ve (b) bir agir zincir CDR2 sekansi olan SINNGNNPYYARSVQY (SEKANS KOD NO.: 2), ve (0) bir agir zincir CDR3 sekansi olan DHPSSGWPTFDS (SEKANS KOD NO.: 3), ve (d) bir hafif zincir CDR] sekansi olan RASENVGDWLA (SEKANS KOD NO.: 4), ve (e) bir hafif zincir CDR2 sekansi olan KTSILES (SEKANS KOD NO.: 5), ve (f) bir hafif zincir CDR3 sekansi olan X'in 1 veya M oldugu QHYXRFPYT (SEKANS KOD NO.: 6); (i) "Kabat (1991)" eserinde gösterilen amino asit nuinaralandirma sistemine göre agir zincir degisken domaininde 53 numarali pozisyonda yer alan asparajinin baska bir amino asit ile ikamesi, amino asidin serin ile ikamesi; veya (ii) "Kabat (1991)" eserinde gösterilen amino asit nuinaralandirma sistemine göre agir zincir degisken domaininde 53 numarali pozisyonda yer alan asparajinin serin ile ikamesi, 114 numarali pozisyonda yer alan alaninin sistein ile ikamesi ve 222 numarali pozisyonda yer alan ar jininin lizin ile ikamesi; veya (iii) "Kabat (1991)" eserinde gösterilen amino asit numaralandirma sistemine göre hafif zincir degisken domaininde 205 numarali pozisyonda yer alan valinin sistein ile ikamesi, hafif zincir degisken domaininde 110 numarali pozisyonda yer alan alaniniii valin ile ikamesi ve hafif zincir degisken domaininde 104 numarali pozisyonda yer alan lösinin valin ile ikamesi. Asagida belirtileiileri içeren, istem 7'ye uygun bir izole antikor veya onun bir fonksiyonel parçasi: (a) SEKANS KOD NO.: 56 sekansini içeren bir agir zincir (Sekil 9A, rFl A1 14C); ve (b) SEKANS KOD NO.: 58 sekansini içeren bir hafif zincir (Sekil 9B, rFl V205G). Istem 1'e uygun antikorun bir fonksiyonel parçasini içeren bir bilesim olup, burada antikorun fonksiyonel parçasi bir tek domainli antikor, bir tek zincirli antikor, bir nanobody, bir unibody, bir tek zincirli degisken bölge fragmani (scFV), bir Fab fragmani ve bir F(ab')2 fragmani arasindan seçilir. Asagida belirtilenlerden birini kodlayaii bir izole, sentetik veya rekombinan iiükleik asit sekansi: (i) istem 1 ilâ 8'e uygun antikorlar veya bunun fonksiyonel parçalarindan herhangi biri; veya (ii) agir zincir CDRl, CDR2 veya CDR3 ya da hafif zincir CDRl, CDR2 veya CDR3 burada sekans asagida olusan grup arasindan seçilir: agir zincir CDRl sekansi cgctttgccatgagc (SEKANS KOD NO.: 12), agir zincir CDR2 sekansi (SEKANS KOD NO.: 13), agir zincir CDR3 sekansi gatcaccctagtagtggctggcccacctttgactcc (SEKANS KOD NO.: 14), hafif zincir CDRl sekansi cgggccagtgaaaacgttggtgactggttgg cc (SEKANS KOD NO.: 15), hafif zincir CDR2 sekansi aagacatctattctagaaagt (SEKANS KOD NO.: 16) ve hafif zincir CDR3 sekansi Caacactatatacgtttcccgtacact (SEKANS KOD NO.: 17). Istem lO'a uygun nükleik asidi içeren bir izole hücre. Bir ilaç ve/Veya profilaktik ajan olarak kullanim için, istemler 1 ilâ 8'den herhangi birine uygun bir antikor veya onun fonksiyonel parçasi ya da istem lO'a uygun bir nükleik asit sekansi. Asagida belirtilen kullanim alanlarindan birinde kullanim için, isteniler l ilâ 8'den herhangi birine uygun bir antikor veya onun fonksiyonel parçasi ya da istem lO'a uygun bir nükleik asit sekansi: (i) bir Gram-pozitif bakteri ile iliskili rahatsizligi tedavi etmeye ve/veya Önlemeye yönelik bir ilaç ve/veya profilaktik ajan olarak; veya (ii) bir Staphylococcus enfeksiyonunun in vivo ortamda teshisinde. Istemler 1 ilâ 8'de11 herhangi birine uygun bir antikor veya onun fonksiyonel parçasi ya da istein lO'a uygun bir nükleik asit sekansinin bir Gram-pozitif bakteri ile iliskili hastaligi tedavi etmeye ve/veya önlemeye yönelik bir ilaç ve/veya profilaktik a janin hazirlanma asamasinda kullanimi. Istemler l ilâ 8'den herhangi birine uygun bir antikor veya onun fonksiyonel parçasinin ya da istem 10'a uygun bir nükleik asit sekansinin bulundugu ve ayrica bir faimasötik açidan kabul edilebilir tasiyici, seyreltici veya yardimci madde ihtiva eden bir farmasötik bilesim. Isteinler 1 ilâ 8'den herhangi birine uygun bir antikor veya bir fonksiyonel antikor parçasi üretme kabiliyetine sahip olan bir izole veya rekombinan antikor üreten hücre. Istemler 1 ilâ 8'den herhangi birine uygun bir antikor veya bir fonksiyonel antikor parçasi üretmek için olan ve istem 10'a uygun bir nükleik asit sekansi bulunan bir hücrenin temin edilmesi ve o hücrenin söz konusu nükleik asit sekansini translate etmesine izin vermek suretiyle bahsi geçen antikor veya fonksiyonel antikor parçasini üretmeye dayanan ve istege bagli olarak ayrica söz konusu antikor veya fonksiyonel antikor parçasinin hasat edildigi, saflastirildigi ve/Veya izole edildigi bir yöntem. Isteniler l ilâ 8'den herhangi birine uygun bir antikor veya onun fonksiyonel parçasi ya da istem 10'a uygun bir nükleik asit sekansinin asagida belirtilen kullanim alanlarindan birinde in vitro ortamda kullanimi: (a) bir Staphylococcus enfeksiyonunun teshisi; veya (b) S. aureus ve/veya S. epiderinidis'in tespiti. Bir çözeltide bulunan S. aureus ve/Veya S. epiderinidis bakterilerini o çözeltiden isteinler l ilâ 8'den herhangi birine uygun bir antikor veya bir fonksiyonel antikor parçasi kullanarak izole etmek için olan bir yöntem.
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