SG11201808514YA - Method for designing mutant primer - Google Patents
Method for designing mutant primerInfo
- Publication number
- SG11201808514YA SG11201808514YA SG11201808514YA SG11201808514YA SG11201808514YA SG 11201808514Y A SG11201808514Y A SG 11201808514YA SG 11201808514Y A SG11201808514Y A SG 11201808514YA SG 11201808514Y A SG11201808514Y A SG 11201808514YA SG 11201808514Y A SG11201808514Y A SG 11201808514YA
- Authority
- SG
- Singapore
- Prior art keywords
- primer
- nucleotide residue
- region
- loop structure
- designing
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6811—Selection methods for production or design of target specific oligonucleotides or binding molecules
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
- G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- General Health & Medical Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Genetics & Genomics (AREA)
- Molecular Biology (AREA)
- Analytical Chemistry (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Evolutionary Biology (AREA)
- Medical Informatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2016067252 | 2016-03-30 | ||
| JP2016154013A JP6681804B2 (ja) | 2016-03-30 | 2016-08-04 | 変異プライマーの設計方法 |
| PCT/JP2017/004162 WO2017169119A1 (ja) | 2016-03-30 | 2017-02-06 | 変異プライマーの設計方法 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| SG11201808514YA true SG11201808514YA (en) | 2018-10-30 |
Family
ID=60044331
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| SG11201808514YA SG11201808514YA (en) | 2016-03-30 | 2017-02-06 | Method for designing mutant primer |
Country Status (8)
| Country | Link |
|---|---|
| US (1) | US20190144933A1 (ko) |
| EP (1) | EP3438257A4 (ko) |
| JP (1) | JP6681804B2 (ko) |
| KR (1) | KR20180129806A (ko) |
| CN (1) | CN109072221A (ko) |
| CA (1) | CA3019468A1 (ko) |
| SG (1) | SG11201808514YA (ko) |
| ZA (1) | ZA201806890B (ko) |
Family Cites Families (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ES2230631T3 (es) * | 1997-03-20 | 2005-05-01 | F. Hoffmann-La Roche Ag | Cebadores modificados. |
| US6277607B1 (en) * | 1999-05-24 | 2001-08-21 | Sanjay Tyagi | High specificity primers, amplification methods and kits |
| DE60115811T2 (de) * | 2000-10-25 | 2006-08-03 | Roche Diagnostics Gmbh | Amplifizierung unter Verwendung von modifizierten Primern |
| CN101171343A (zh) * | 2005-04-14 | 2008-04-30 | 阿普里拉股份有限公司 | 含有假异胞嘧啶核碱基衍生物的3’修饰寡核苷酸及其作为引物或探针的应用 |
| ES2647237T3 (es) * | 2007-07-03 | 2017-12-20 | Genaphora Ltd. | Cebadores quiméricos para reacciones de amplificación de ácidos nucleicos mejoradas |
| KR101110013B1 (ko) * | 2007-10-05 | 2012-02-29 | (주)바이오니아 | 서열 내에 어베이직 부분을 포함하는 ｐｃｒ 증폭용프라이머 |
| US9783844B2 (en) * | 2012-04-27 | 2017-10-10 | Kaneka Corporation | Method for amplifying nucleic acid and method for detecting amplified nucleic acid |
| AU2012384852B2 (en) * | 2012-07-03 | 2015-10-08 | Mackay Memorial Hospital | Self-competitive primer and method of use |
| WO2017144457A1 (en) * | 2016-02-25 | 2017-08-31 | F. Hoffmann-La Roche Ag | Elimination of primer-primer interactions during primer extension |
-
2016
- 2016-08-04 JP JP2016154013A patent/JP6681804B2/ja not_active Expired - Fee Related
-
2017
- 2017-02-06 CA CA3019468A patent/CA3019468A1/en not_active Abandoned
- 2017-02-06 KR KR1020187028480A patent/KR20180129806A/ko unknown
- 2017-02-06 EP EP17773668.3A patent/EP3438257A4/en not_active Withdrawn
- 2017-02-06 US US16/089,980 patent/US20190144933A1/en not_active Abandoned
- 2017-02-06 CN CN201780020530.4A patent/CN109072221A/zh not_active Withdrawn
- 2017-02-06 SG SG11201808514YA patent/SG11201808514YA/en unknown
-
2018
- 2018-10-16 ZA ZA2018/06890A patent/ZA201806890B/en unknown
Also Published As
| Publication number | Publication date |
|---|---|
| CA3019468A1 (en) | 2017-10-05 |
| US20190144933A1 (en) | 2019-05-16 |
| JP2017184710A (ja) | 2017-10-12 |
| ZA201806890B (en) | 2020-01-29 |
| CN109072221A (zh) | 2018-12-21 |
| EP3438257A4 (en) | 2019-10-23 |
| EP3438257A1 (en) | 2019-02-06 |
| JP6681804B2 (ja) | 2020-04-15 |
| KR20180129806A (ko) | 2018-12-05 |
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