PL419907A1 - Sposób detekcji materiału genetycznego w próbce biologicznej oraz urządzenie do jego realizacji - Google Patents

Sposób detekcji materiału genetycznego w próbce biologicznej oraz urządzenie do jego realizacji

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Publication number
PL419907A1
PL419907A1 PL419907A PL41990716A PL419907A1 PL 419907 A1 PL419907 A1 PL 419907A1 PL 419907 A PL419907 A PL 419907A PL 41990716 A PL41990716 A PL 41990716A PL 419907 A1 PL419907 A1 PL 419907A1
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PL
Poland
Prior art keywords
genetic material
biological sample
reaction chambers
execution
detection
Prior art date
Application number
PL419907A
Other languages
English (en)
Other versions
PL235210B1 (pl
Inventor
Miron TOKARSKI
Henryk Waldemar ROGUSZCZAK
Tadeusz Dobosz
Leszek GOLONKA
Arkadiusz Dąbrowski
Małgorzata MAŁODOBRA-MAZUR
Damian Andrzejewski
Original Assignee
Genomtec Spółka Akcyjna
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
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Publication date
Application filed by Genomtec Spółka Akcyjna filed Critical Genomtec Spółka Akcyjna
Priority to PL419907A priority Critical patent/PL235210B1/pl
Priority to CN201780078465.0A priority patent/CN110088266A/zh
Priority to HUE17002043A priority patent/HUE058240T2/hu
Priority to RS20220414A priority patent/RS63179B1/sr
Priority to JP2019534892A priority patent/JP6961700B2/ja
Priority to CA2989599A priority patent/CA2989599C/en
Priority to BR112019012501-9A priority patent/BR112019012501B1/pt
Priority to EP22155747.3A priority patent/EP4029607A1/en
Priority to HRP20220582TT priority patent/HRP20220582T1/hr
Priority to DK17002043.2T priority patent/DK3338891T3/da
Priority to EP17002043.2A priority patent/EP3338891B8/en
Priority to ES17002043T priority patent/ES2913092T3/es
Priority to LTEP17002043.2T priority patent/LT3338891T/lt
Priority to PCT/PL2017/050065 priority patent/WO2018117882A1/en
Priority to PT170020432T priority patent/PT3338891T/pt
Priority to SI201731139T priority patent/SI3338891T1/sl
Priority to US15/850,733 priority patent/US10781479B2/en
Publication of PL419907A1 publication Critical patent/PL419907A1/pl
Publication of PL235210B1 publication Critical patent/PL235210B1/pl
Priority to US17/002,321 priority patent/US11608521B2/en

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    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • B01L3/502738Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by integrated valves
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701Specific hybridization probes
    • C12Q1/702Specific hybridization probes for retroviruses
    • C12Q1/703Viruses associated with AIDS
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/06Fluid handling related problems
    • B01L2200/0605Metering of fluids
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2300/06Auxiliary integrated devices, integrated components
    • B01L2300/0627Sensor or part of a sensor is integrated
    • B01L2300/0663Whole sensors
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2300/06Auxiliary integrated devices, integrated components
    • B01L2300/0672Integrated piercing tool
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2300/00Additional constructional details
    • B01L2300/08Geometry, shape and general structure
    • B01L2300/0809Geometry, shape and general structure rectangular shaped
    • B01L2300/0816Cards, e.g. flat sample carriers usually with flow in two horizontal directions
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2300/00Additional constructional details
    • B01L2300/16Surface properties and coatings
    • B01L2300/161Control and use of surface tension forces, e.g. hydrophobic, hydrophilic
    • B01L2300/165Specific details about hydrophobic, oleophobic surfaces
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00Additional constructional details
    • B01L2300/18Means for temperature control
    • B01L2300/1861Means for temperature control using radiation
    • B01L2300/1872Infrared light
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2400/00Moving or stopping fluids
    • B01L2400/04Moving fluids with specific forces or mechanical means
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    • B01L2400/0406Moving fluids with specific forces or mechanical means specific forces capillary forces
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
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    • B01L2400/04Moving fluids with specific forces or mechanical means
    • B01L2400/0475Moving fluids with specific forces or mechanical means specific mechanical means and fluid pressure
    • B01L2400/0487Moving fluids with specific forces or mechanical means specific mechanical means and fluid pressure fluid pressure, pneumatics
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    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
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    • B01L2400/00Moving or stopping fluids
    • B01L2400/06Valves, specific forms thereof
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • G01N2021/6439Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" with indicators, stains, dyes, tags, labels, marks
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    • G01MEASURING; TESTING
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  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
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  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
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  • AIDS & HIV (AREA)
  • Botany (AREA)
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  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
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Abstract

Przedmiotem niniejszego zgłoszenia jest sposób detekcji materiału genetycznego w próbce biologicznej, w którym próbkę biologiczną wprowadza się do wkładu reakcyjnego (6), a następnie umieszcza się wkład reakcyjny (6) w urządzeniu sterującym, wprowadza się pobraną próbkę biologiczną do komory izolacji (7), przeprowadza się izolację materiału genetycznego z próbki biologicznej poprzez ogrzewanie komory izolacji (7), przemieszcza się wyizolowany materiał genetyczny do szeregu komór reakcyjnych (8.1, 8.2, 8.3), przeprowadza się amplifikację materiału genetycznego poprzez ogrzewanie komór reakcyjnych (8.1, 8.2, 8.3), przy czym w komorach reakcyjnych (8.1, 8.2, 8.3) znajdują się zliofilizowane odczynniki do amplifikacji materiału genetycznego wraz z zliofilizowanym znacznikiem fluorescencyjnym interkalującym z wykrywanym materiałem genetycznym, a jednocześnie z etapem amplifikacji materiału genetycznego prowadzi się detekcję sygnału ze znaczników fluorescencyjnych.
PL419907A 2016-12-21 2016-12-21 Sposób detekcji materiału genetycznego w próbce biologicznej oraz urządzenie do jego realizacji PL235210B1 (pl)

Priority Applications (18)

Application Number Priority Date Filing Date Title
PL419907A PL235210B1 (pl) 2016-12-21 2016-12-21 Sposób detekcji materiału genetycznego w próbce biologicznej oraz urządzenie do jego realizacji
DK17002043.2T DK3338891T3 (da) 2016-12-21 2017-12-20 En fremgangsmåde til at detektere genetisk materiale i en biologisk prøve og en indretning til implementering deraf
EP17002043.2A EP3338891B8 (en) 2016-12-21 2017-12-20 A method of detecting genetic material in a biological sample and a device for its implementation
RS20220414A RS63179B1 (sr) 2016-12-21 2017-12-20 Postupak otkrivanja genetskog materijala u biološkom uzorku i uređaj za nјegovu primenu
JP2019534892A JP6961700B2 (ja) 2016-12-21 2017-12-20 生体サンプル中の遺伝物質を検出する方法及びその実施のための装置
CA2989599A CA2989599C (en) 2016-12-21 2017-12-20 A method of detecting genetic material in a biological sample and a device for its implementation
BR112019012501-9A BR112019012501B1 (pt) 2016-12-21 2017-12-20 Um método para detectar material genético em uma amostra biológica e um dispositivo para sua implementação
EP22155747.3A EP4029607A1 (en) 2016-12-21 2017-12-20 A method of detecting genetic material in a biological sample and a device for its implementation
HRP20220582TT HRP20220582T1 (hr) 2016-12-21 2017-12-20 Postupak otkrivanja genetskog materijala u biološkom uzorku i uređaj za njegovu implementaciju
CN201780078465.0A CN110088266A (zh) 2016-12-21 2017-12-20 检测生物样品中的遗传物质的方法及其实施设备
HUE17002043A HUE058240T2 (hu) 2016-12-21 2017-12-20 Eljárás genetikai anyag biológiai mintában való detektálására, és annak megvalósítására szolgáló eszköz
ES17002043T ES2913092T3 (es) 2016-12-21 2017-12-20 Un método para detectar material genético en una muestra biológica y un dispositivo para su implementación
LTEP17002043.2T LT3338891T (lt) 2016-12-21 2017-12-20 Genetinės medžiagos aptikimo biologiniame ėminyje būdas ir prietaisas jam įgyvendinti
PCT/PL2017/050065 WO2018117882A1 (en) 2016-12-21 2017-12-20 A method of detecting genetic material in a biological sample and a device for its implementation
PT170020432T PT3338891T (pt) 2016-12-21 2017-12-20 Um método para detetar material genético numa amostra biológica e um dispositivo para a sua implementação
SI201731139T SI3338891T1 (sl) 2016-12-21 2017-12-20 Metoda zaznavanja genetskega materiala v biološkem vzorcu in naprava za izvajanje omenjene metode
US15/850,733 US10781479B2 (en) 2016-12-21 2017-12-21 Method of detecting genetic material in a biological sample and a device for its implementation
US17/002,321 US11608521B2 (en) 2016-12-21 2020-08-25 Method of detecting genetic material in a biological sample and a device for its implementation

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PL419907A PL235210B1 (pl) 2016-12-21 2016-12-21 Sposób detekcji materiału genetycznego w próbce biologicznej oraz urządzenie do jego realizacji

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PL419907A1 true PL419907A1 (pl) 2018-07-02
PL235210B1 PL235210B1 (pl) 2020-06-15

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Country Status (16)

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US (2) US10781479B2 (pl)
EP (2) EP4029607A1 (pl)
JP (1) JP6961700B2 (pl)
CN (1) CN110088266A (pl)
BR (1) BR112019012501B1 (pl)
CA (1) CA2989599C (pl)
DK (1) DK3338891T3 (pl)
ES (1) ES2913092T3 (pl)
HR (1) HRP20220582T1 (pl)
HU (1) HUE058240T2 (pl)
LT (1) LT3338891T (pl)
PL (1) PL235210B1 (pl)
PT (1) PT3338891T (pl)
RS (1) RS63179B1 (pl)
SI (1) SI3338891T1 (pl)
WO (1) WO2018117882A1 (pl)

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CN115290606A (zh) * 2022-08-22 2022-11-04 凤凰医学诊断科技有限公司 一种检测装置

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