JP7444521B2 - 臨床使用に適した無血清懸濁細胞培養システムにおいて組換えアデノ随伴ウイルス(aav)ベクターを産生するスケーラブルな方法 - Google Patents
臨床使用に適した無血清懸濁細胞培養システムにおいて組換えアデノ随伴ウイルス(aav)ベクターを産生するスケーラブルな方法 Download PDFInfo
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Description
[0003]本発明が属する技術の現状を説明するために、本明細書全体にわたりいくつかの刊行物及び特許文書が引用されている。これらの引用のそれぞれは、全部が明記されているかのように、参照により本明細書に組み込まれている。
[0158]本実施例は、様々な材料及び方法の説明を含む。
[0169]本実施例は、様々な結果の説明を含む。
[0186]本発明の実施形態のうちのいくつかを説明し、上に具体的に例示したものの、本発明がそのような実施形態に限定されることは意図されない。本発明の範囲及び精神から逸脱せずに、以下の特許請求の範囲に示されるように実施形態に様々な改変が加えられる場合がある。
[0001]本特許出願は、その全体が参照により本明細書に明白に組み込まれている、2015年12月1日に出願された米国特許出願第62/261,815号の利益を主張する。
Claims (37)
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する形質移入細胞を生産する方法であって、
(a)AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミドを用意するステップ;
(b)目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミドを用意するステップ;
(c)ポリエチレンイミン(PEI)を含む溶液を用意するステップ;
(d)ステップ(a)及び(b)のプラスミドをステップ(c)のPEI溶液と混合して、プラスミド/PEI混合物を生産し、任意選択で前記プラスミド/PEI混合物を10秒~4時間の範囲の期間インキュベートするステップであって、前記ステップ(a)及び(b)のプラスミドが、1:0.01~1:100のモル比範囲である、ステップ;
(e)細胞をステップ(d)の前記プラスミド/PEI混合物と接触させて、プラスミド/PEI細胞培養物を生産するステップ;
(f)ステップ(e)で生産した前記プラスミド/PEI細胞培養物に遊離PEIを添加して、遊離PEI/プラスミド/PEI細胞培養物を生産するステップ;並びに
(g)ステップ(f)の前記遊離PEI/プラスミド/PEI細胞培養物を少なくとも4時間インキュベートし、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する形質移入細胞を生産するステップ
を含む、方法。 - ステップ(g)で生産した前記形質移入細胞及び/又はステップ(g)で生産した前記形質移入細胞からの培養培地を収集して、細胞及び/又は培養培地収集物を生産するステップをさらに含む、請求項1に記載の方法。
- ステップ(g)から前記形質移入細胞及び/又は培養培地収集物から組換えAAVベクターを単離及び/又は精製し、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産するステップをさらに含む、請求項2に記載の方法。
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する方法であって、
(a)AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミドを用意するステップ;
(b)目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミドを用意するステップ;
(c)ポリエチレンイミン(PEI)を含む溶液を用意するステップ;
(d)ステップ(a)及び(b)の前記プラスミドをステップ(c)の前記PEI溶液と混合して、プラスミド/PEI混合物を生産し、任意選択でプラスミド/PEI混合物を10秒~4時間の範囲の期間インキュベートするステップであって、前記ステップ(a)及び(b)のプラスミドが、1:0.01~1:100のモル比範囲である、ステップ;
(e)細胞をステップ(d)で生産した前記プラスミド/PEI混合物と接触させて、プラスミド/PEI細胞培養物を生産するステップ;
(f)ステップ(e)で生産した前記プラスミド/PEI細胞培養物に遊離PEIを添加して、遊離PEI/プラスミド/PEI細胞培養物を生産するステップ;
(g)ステップ(f)の前記遊離PEI/プラスミド/PEI細胞培養物を少なくとも4時間インキュベートして、形質移入細胞を生産するステップ;
(h)ステップ(g)で生産した前記形質移入細胞及び/又はステップ(g)で生産した形質移入細胞からの培養培地を収集して、細胞及び/又は培養培地収集物を生産するステップ;並びに
(i)ステップ(h)で生産した前記細胞及び/又は培養培地収集物から組換えAAVベクターを単離及び/又は精製し、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産するステップ
を含む、方法。 - 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する形質移入細胞を生産する方法であって、
(a)成分(i)、(ii)及び(iii):
(i)AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミド;
(ii)目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミド;並びに
(iii)ポリエチレンイミン(PEI)溶液
の混合物を用意するステップ、
(b)前記プラスミド(i)及び(ii)が、1:0.01~1:100のモル比範囲となるように、前記プラスミドを前記PEI溶液(iii)と混合して、プラスミド/PEI混合物を生産し、任意選択で前記プラスミド/PEI混合物を10秒~4時間の範囲の期間インキュベートするステップ;
(c)細胞をステップ(b)で生産した前記プラスミド/PEI混合物と接触させて、プラスミド/PEI細胞培養物を生産するステップ;
(d)ステップ(c)で生産した前記プラスミド/PEI細胞培養物に遊離PEIを添加して、遊離PEI/プラスミド/PEI細胞培養物を生産するステップ;
(e)ステップ(c)の前記プラスミド/PEI細胞培養物又はステップ(d)の前記遊離PEI/プラスミド/PEI細胞培養物を少なくとも4時間インキュベートして、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する形質移入細胞を生産するステップ
を含む、方法。 - ステップ(h)で生産した前記形質移入細胞から組換えAAVベクターを精製し、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む精製された組換えAAVベクターを生産することを含む、請求項4に記載の方法。
- ステップ(e)で生産した形質移入細胞を収集して、細胞及び/若しくは培養培地収集物を生産するステップ;並びに/又はステップ(e)で生産した形質移入細胞から組換えAAVベクターを単離及び/若しくは精製し、それにより、目的のタンパク質をコードする若しくは目的の転写物に転写される核酸を含む組換えAAVベクターを生産するステップをさらに含む、請求項5に記載の方法。
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する方法であって、
(a)成分(i)、(ii)及び(iii):
(i)AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミド;
(ii)目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミド;並びに
(iii)ポリエチレンイミン(PEI)溶液
の混合物を用意するステップ、
(b)前記プラスミド(i)及び(ii)が、1:0.01~1:100のモル比範囲となるように、前記プラスミドを前記PEI溶液(iii)と混合して、プラスミド/PEI混合物を生産し、任意選択で前記プラスミド/PEI混合物を10秒~4時間の期間インキュベートするステップ;
(c)細胞をステップ(b)で生産した前記プラスミド/PEI混合物と接触させて、プラスミド/PEI細胞培養物を生産するステップ;
(d)ステップ(c)で生産した前記プラスミド/PEI細胞培養物に遊離PEIを添加して、遊離PEI/プラスミド/PEI細胞培養物を生産するステップ;
(e)ステップ(c)の前記プラスミド/PEI細胞培養物又はステップ(d)の前記遊離PEI/プラスミド/PEI細胞培養物を少なくとも4時間インキュベートして、形質移入細胞を生産するステップ;
(f)ステップ(e)で生産した前記形質移入細胞及び/又はステップ(e)で生産した形質移入細胞からの培養培地を収集して、細胞及び/又は培養培地収集物を生産するステップ;並びに
(g)ステップ(f)で生産した細胞及び/又は培養培地収集物から組換えAAVベクターを単離及び/又は精製し、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産するステップ
を含む、方法。 - 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産する方法であって、
(a)成分(i)、(ii)及び(iii):
(i)AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミド;
(ii)目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミド;並びに
(iii)ポリエチレンイミン(PEI)溶液
の混合物を用意するステップであって、
前記プラスミド(i)及び(ii)が、1:0.01~1:100のモル比範囲であり、成分(i)、(ii)及び(iii)の混合物が、任意選択で10秒~4時間の期間インキュベートされたものである、ステップ;
(b)細胞を、ステップ(a)で生産した混合物と接触させて、プラスミド/PEI細胞培養物を生産するステップ;
(c)ステップ(b)で生産した前記プラスミド/PEI細胞培養物に遊離PEIを添加して、遊離PEI/プラスミド/PEI細胞培養物を生産するステップ;
(d)ステップ(b)の前記プラスミド/PEI細胞培養物又はステップ(c)の前記遊離PEI/プラスミド/PEI細胞培養物を少なくとも4時間インキュベートして、形質移入細胞を生産するステップ;
(e)ステップ(d)で生産した前記形質移入細胞及び/又はステップ(d)で生産した形質移入細胞からの培養培地を収集して、細胞及び/又は培養培地収集物を生産するステップ;並びに
(f)ステップ(e)で生産した細胞及び/又は培養培地収集物から組換えAAVベクターを単離及び/又は精製し、それにより、目的のタンパク質をコードする又は目的の転写物に転写される核酸を含む組換えAAVベクターを生産するステップ
を含む、方法。 - 前記プラスミド/PEI細胞培養物、又は前記遊離PEI/プラスミド/PEI細胞培養物が、4時間~140時間の範囲の期間インキュベートされる、請求項1~9のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物が、0.1:1~5:1の範囲のPEI:プラスミド重量比を有するか、前記遊離PEI/プラスミド/PEI細胞培養物が、0.1:1~5:1の範囲のPEI:プラスミド重量比を有する、請求項1~10のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物及び/又は遊離PEIのPEIが、加水分解直鎖状ポリエチレンイミンを含む、請求項1~11のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物及び/又は前記遊離PEIのPEIが、4,000~160,000の範囲の分子量及び/又は遊離塩基形態で2,500~250,000の範囲の分子量を有する加水分解直鎖状ポリエチレンイミンを含む、請求項1~12のいずれか一項に記載の方法。
- 総PEI中の窒素(N)とプラスミド中のリン酸(P)とのモル比が、前記遊離PEI/プラスミド/PEI細胞培養物において1:1~50:1(N:P)の範囲である、請求項1~13のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物が、30秒~4時間の範囲の期間インキュベートされる、請求項1~14のいずれか一項に記載の方法。
- 遊離PEIの量が、総PEIの10%~90%の範囲である、請求項1~15のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物が前記細胞と接触した後に、前記遊離PEIが、前記細胞に添加される、請求項1~16のいずれか一項に記載の方法。
- 前記細胞が、懸濁培養中にある、請求項1~17のいずれか一項に記載の方法。
- 前記細胞が、無血清培養培地中で成長又は維持される、請求項1~18のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物及び/又は前記遊離PEIと接触するときに、前記細胞が、細胞1×105個/mL~1×108個/mLの範囲の密度である、請求項1~19のいずれか一項に記載の方法。
- 前記プラスミド/PEI混合物若しくは前記遊離PEIと接触するときに、前記細胞の生存率が、60%若しくは60%超であるか、前記プラスミド/PEI混合物と接触するときに、前記細胞が、対数期成長中である、請求項1~20のいずれか一項に記載の方法。
- コードされるAAVパッケージングタンパク質が、AAV rep及び/又はAAV capを含む、請求項1~21のいずれか一項に記載の方法。
- コードされるヘルパー機能が、アデノウイルスE2及び/若しくはE4タンパク質、VA RNA、並びに/又は非AAVヘルパータンパク質を含む、請求項1~22のいずれか一項に記載の方法。
- 前記細胞が、哺乳動物細胞である、請求項1~23のいずれか一項に記載の方法。
- 前記細胞が、HEK293E細胞又はHEK293F細胞である、請求項1~23のいずれか一項に記載の方法。
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミドと、AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミドとの合計量が、細胞1mLあたり0.1μg~15μgの範囲である、請求項1~25のいずれか一項に記載の方法。
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミドと、AAVパッケージングタンパク質をコードする核酸及びヘルパー機能をコードする核酸を含む複数種のプラスミドとのモル比が、1:5~1:1の範囲又は1:1~5:1の範囲である、請求項1~26のいずれか一項に記載の方法。
- 前記複数種のプラスミドが、AAVパッケージングタンパク質をコードする核酸を含む第1のプラスミド及びヘルパー機能をコードする核酸を含む第2のプラスミドを含む、請求項1~27のいずれか一項に記載の方法。
- 目的のタンパク質をコードする又は目的の転写物に転写される核酸を含むプラスミドと、AAVパッケージングタンパク質をコードする核酸を含む第1のプラスミドと、ヘルパー機能をコードする核酸を含む第2のプラスミドとのモル比が、1~5:1:1、又は1:1~5:1、又は1:1:1~5の範囲である、請求項28に記載の方法。
- AAVベクターが、AAV血清型又はAAV偽型を含み、前記AAV偽型が、ITR血清型と異なるAAVカプシド血清型を含む、請求項1~29のいずれか一項に記載の方法。
- AAVベクターが、イントロン、発現制御エレメント、1つ若しくは複数のアデノ随伴ウイルス(AAV)逆位末端反復(ITR)及び/又はフィラーポリヌクレオチド配列をさらに含む、請求項1~30のいずれか一項に記載の方法。
- 発現制御エレメントが、構成的若しくは調節可能制御エレメント、又は組織特異的発現制御エレメント若しくはプロモーターを含む、請求項31に記載の方法。
- 発現制御エレメントが、肝臓における発現を付与するエレメントを含む、請求項31に記載の方法。
- AAVベクターが、AAV1、AAV2、AAV3、AAV4、AAV5、AAV6、AAV10、AAV11、若しくはAAV-2i8のVP1、VP2及び/若しくはVP3カプシドタンパク質のうちのいずれかと90%以上の配列同一性を有するVP1、VP2及び/若しくはVP3カプシドタンパク質を含むか、AAV1、AAV2、AAV3、AAV4、AAV5、AAV6、AAV10、AAV11、及びAAV-2i8のAAV血清型のうちのいずれかから選択される改変若しくはバリアントVP1、VP2及び/若しくはVP3カプシドタンパク質を含む、請求項1~33のいずれか一項に記載の方法。
- 細胞が、前記プラスミド/PEI混合物と接触する前に、細胞0.1×106個/ml~5.0×106個/mlの範囲の細胞密度に継代培養される、請求項1~34のいずれか一項に記載の方法。
- 細胞が、継代培養の後に、前記プラスミド/PEI混合物と2日~5日の間の期間接触する、請求項35に記載の方法。
- 生産した組換えAAVベクターの量が、プラスミド/PEI細胞培養物に遊離PEIを添加するステップのない状態と比較して、プラスミド/PEI細胞培養物に遊離PEIを添加するステップのある状態で、少なくとも50%以上である、請求項1~36のいずれか一項に記載の方法。
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