JP2019528762A5 - - Google Patents

Download PDF

Info

Publication number
JP2019528762A5
JP2019528762A5 JP2019517311A JP2019517311A JP2019528762A5 JP 2019528762 A5 JP2019528762 A5 JP 2019528762A5 JP 2019517311 A JP2019517311 A JP 2019517311A JP 2019517311 A JP2019517311 A JP 2019517311A JP 2019528762 A5 JP2019528762 A5 JP 2019528762A5
Authority
JP
Japan
Prior art keywords
sequence
capture
oligonucleotide
cassetteable
hybridization probe
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP2019517311A
Other languages
English (en)
Japanese (ja)
Other versions
JP2019528762A (ja
JP7280181B2 (ja
Filing date
Publication date
Application filed filed Critical
Priority claimed from PCT/US2017/054628 external-priority patent/WO2018064640A1/en
Publication of JP2019528762A publication Critical patent/JP2019528762A/ja
Publication of JP2019528762A5 publication Critical patent/JP2019528762A5/ja
Application granted granted Critical
Publication of JP7280181B2 publication Critical patent/JP7280181B2/ja
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

JP2019517311A 2016-10-01 2017-09-29 Dnaバーコード組成物及びマイクロ流体デバイスによるインサイチュ同定法 Active JP7280181B2 (ja)

Applications Claiming Priority (11)

Application Number Priority Date Filing Date Title
US201662403116P 2016-10-01 2016-10-01
US201662403111P 2016-10-01 2016-10-01
US62/403,116 2016-10-01
US62/403,111 2016-10-01
US201762457582P 2017-02-10 2017-02-10
US201762457399P 2017-02-10 2017-02-10
US62/457,399 2017-02-10
US62/457,582 2017-02-10
US201762470669P 2017-03-13 2017-03-13
US62/470,669 2017-03-13
PCT/US2017/054628 WO2018064640A1 (en) 2016-10-01 2017-09-29 Dna barcode compositions and methods of in situ identification in a microfluidic device

Publications (3)

Publication Number Publication Date
JP2019528762A JP2019528762A (ja) 2019-10-17
JP2019528762A5 true JP2019528762A5 (cg-RX-API-DMAC10.html) 2020-11-12
JP7280181B2 JP7280181B2 (ja) 2023-05-23

Family

ID=61763605

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2019517311A Active JP7280181B2 (ja) 2016-10-01 2017-09-29 Dnaバーコード組成物及びマイクロ流体デバイスによるインサイチュ同定法

Country Status (11)

Country Link
US (2) US20190345488A1 (cg-RX-API-DMAC10.html)
EP (1) EP3519612B1 (cg-RX-API-DMAC10.html)
JP (1) JP7280181B2 (cg-RX-API-DMAC10.html)
KR (1) KR102650753B1 (cg-RX-API-DMAC10.html)
CN (1) CN110114520B (cg-RX-API-DMAC10.html)
AU (2) AU2017336164A1 (cg-RX-API-DMAC10.html)
CA (1) CA3038535A1 (cg-RX-API-DMAC10.html)
DK (1) DK3519612T3 (cg-RX-API-DMAC10.html)
IL (1) IL265681A (cg-RX-API-DMAC10.html)
TW (1) TWI835713B (cg-RX-API-DMAC10.html)
WO (1) WO2018064640A1 (cg-RX-API-DMAC10.html)

Families Citing this family (162)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8835358B2 (en) 2009-12-15 2014-09-16 Cellular Research, Inc. Digital counting of individual molecules by stochastic attachment of diverse labels
EP3321378B1 (en) 2012-02-27 2021-11-10 Becton, Dickinson and Company Compositions for molecular counting
CN105705659B (zh) 2013-08-28 2019-11-29 贝克顿迪金森公司 大规模平行单细胞分析
WO2016138496A1 (en) 2015-02-27 2016-09-01 Cellular Research, Inc. Spatially addressable molecular barcoding
CN107406888A (zh) 2015-03-30 2017-11-28 赛卢拉研究公司 用于组合条形编码的方法和组合物
EP4321627A3 (en) 2015-04-10 2024-04-17 10x Genomics Sweden AB Spatially distinguished, multiplex nucleic acid analysis of biological specimens
WO2016191533A1 (en) 2015-05-26 2016-12-01 The Trustees Of Columbia University In The City Of New York Rna printing and sequencing devices, methods, and systems
WO2017044574A1 (en) 2015-09-11 2017-03-16 Cellular Research, Inc. Methods and compositions for nucleic acid library normalization
US11371094B2 (en) 2015-11-19 2022-06-28 10X Genomics, Inc. Systems and methods for nucleic acid processing using degenerate nucleotides
US10301677B2 (en) 2016-05-25 2019-05-28 Cellular Research, Inc. Normalization of nucleic acid libraries
US10202641B2 (en) 2016-05-31 2019-02-12 Cellular Research, Inc. Error correction in amplification of samples
US10640763B2 (en) 2016-05-31 2020-05-05 Cellular Research, Inc. Molecular indexing of internal sequences
IL265478B2 (en) 2016-09-26 2024-10-01 Becton Dickinson Co Measurement of protein expression using reagents with barcoded oligonucleotide sequences
EP3551745A4 (en) 2016-12-12 2020-07-15 Xcella Biosciences, Inc. SCREENING METHODS AND SYSTEMS USING MICROCAPILLARY NETWORKS
US10550429B2 (en) 2016-12-22 2020-02-04 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10815525B2 (en) 2016-12-22 2020-10-27 10X Genomics, Inc. Methods and systems for processing polynucleotides
CN110382439B (zh) 2016-12-30 2026-07-21 埃克切拉生物科学公司 多级样品回收系统
US12264411B2 (en) 2017-01-30 2025-04-01 10X Genomics, Inc. Methods and systems for analysis
EP4310183B1 (en) 2017-01-30 2025-07-09 10X Genomics, Inc. Methods and systems for droplet-based single cell barcoding
US11319583B2 (en) 2017-02-01 2022-05-03 Becton, Dickinson And Company Selective amplification using blocking oligonucleotides
CN110520541B (zh) 2017-02-13 2024-03-26 耶鲁大学 高通量单细胞多组学
JP7536450B2 (ja) 2017-06-05 2024-08-20 ベクトン・ディキンソン・アンド・カンパニー 単一細胞用のサンプルインデックス付加
JP7227162B2 (ja) 2017-06-06 2023-02-21 ザイマージェン インコーポレイテッド 真菌株を改良するためのhtpゲノム操作プラットフォーム
US11364503B2 (en) * 2017-07-17 2022-06-21 Hewlett-Packard Development Company, L.P. Dielectrophoresis separators with cell ejection devices
US11084037B2 (en) 2017-09-25 2021-08-10 Plexium, Inc. Oligonucleotide encoded chemical libraries
WO2019099908A1 (en) 2017-11-17 2019-05-23 10X Genomics, Inc. Methods and systems for associating physical and genetic properties of biological particles
EP3717661A1 (en) 2017-11-27 2020-10-07 The Trustees of Columbia University in the City of New York Rna printing and sequencing devices, methods, and systems
WO2019126789A1 (en) 2017-12-22 2019-06-27 10X Genomics, Inc. Systems and methods for processing nucleic acid molecules from one or more cells
EP3752832A1 (en) 2018-02-12 2020-12-23 10X Genomics, Inc. Methods characterizing multiple analytes from individual cells or cell populations
CA3097976A1 (en) 2018-05-03 2019-11-07 Becton, Dickinson And Company High throughput multiomics sample analysis
EP3788170B1 (en) 2018-05-03 2025-01-01 Becton, Dickinson and Company Molecular barcoding on opposite transcript ends
WO2019236848A1 (en) 2018-06-06 2019-12-12 Zymergen Inc. Manipulation of genes involved in signal transduction to control fungal morphology during fermentation and production
US12188014B1 (en) 2018-07-25 2025-01-07 10X Genomics, Inc. Compositions and methods for nucleic acid processing using blocking agents
US11519033B2 (en) 2018-08-28 2022-12-06 10X Genomics, Inc. Method for transposase-mediated spatial tagging and analyzing genomic DNA in a biological sample
EP3861134B1 (en) 2018-10-01 2024-09-04 Becton, Dickinson and Company Determining 5' transcript sequences
CN113195085B (zh) 2018-10-11 2024-04-19 伯克利之光生命科技公司 用于识别优化蛋白产生的系统和方法以及其试剂盒
US20210382061A1 (en) * 2018-10-22 2021-12-09 The General Hospital Corporation Multiplexed single-cell analysis using optically-encoded rna capture particles
JP7528067B2 (ja) * 2018-10-25 2024-08-05 イルミナ インコーポレイテッド インデックス及びバーコードを使用してアレイ上のリガンドを識別するための方法及び組成物
EP3877520B1 (en) 2018-11-08 2025-03-19 Becton, Dickson And Company Whole transcriptome analysis of single cells using random priming
SG11202102700TA (en) * 2018-11-30 2021-04-29 Illumina Inc Analysis of multiple analytes using a single assay
DK3890876T3 (da) 2018-12-06 2024-07-22 Xcella Biosciences Inc Lateral påfyldning af mikrokapillære arrays
EP3894585A2 (en) 2018-12-10 2021-10-20 10X Genomics, Inc. Generating capture probes for spatial analysis
EP3894552B1 (en) 2018-12-13 2026-01-28 Becton, Dickinson and Company Selective extension in single cell whole transcriptome analysis
US11649485B2 (en) 2019-01-06 2023-05-16 10X Genomics, Inc. Generating capture probes for spatial analysis
US11926867B2 (en) 2019-01-06 2024-03-12 10X Genomics, Inc. Generating capture probes for spatial analysis
EP3914728B1 (en) 2019-01-23 2023-04-05 Becton, Dickinson and Company Oligonucleotides associated with antibodies
US11467153B2 (en) 2019-02-12 2022-10-11 10X Genomics, Inc. Methods for processing nucleic acid molecules
WO2020168013A1 (en) * 2019-02-12 2020-08-20 10X Genomics, Inc. Methods for processing nucleic acid molecules
CN113454234B (zh) 2019-02-14 2025-03-18 贝克顿迪金森公司 杂合体靶向和全转录物组扩增
WO2020168258A1 (en) 2019-02-15 2020-08-20 Berkeley Lights, Inc. Laser-assisted repositioning of a micro-object and culturing of an attachment-dependent cell in a microfluidic environment
SG11202111242PA (en) 2019-03-11 2021-11-29 10X Genomics Inc Systems and methods for processing optically tagged beads
EP3962652A4 (en) 2019-04-30 2023-01-18 Berkeley Lights, Inc. CELL ENCAPSULATION AND ANALYSIS PROCESSES
EP3976820A1 (en) 2019-05-30 2022-04-06 10X Genomics, Inc. Methods of detecting spatial heterogeneity of a biological sample
WO2021016239A1 (en) 2019-07-22 2021-01-28 Becton, Dickinson And Company Single cell chromatin immunoprecipitation sequencing assay
US20220403374A1 (en) * 2019-09-03 2022-12-22 Flexomics, Llc Optically readable barcodes and systems and methods for characterizing molecular interactions
WO2021046475A1 (en) * 2019-09-06 2021-03-11 10X Genomics, Inc. Systems and methods for barcoding cells and cell beads
JP7796538B2 (ja) * 2019-09-20 2026-01-09 イルミナ インコーポレイテッド インデックス及びバーコードを使用してアレイ上のリガンドを識別するための方法及び組成物
AU2020357801A1 (en) * 2019-09-30 2022-04-14 Yale University Deterministic Barcoding for spatial omics sequencing
AU2020361681A1 (en) 2019-10-10 2022-05-05 1859, Inc. Methods and systems for microfluidic screening
US20220390436A1 (en) * 2019-10-25 2022-12-08 Scribe Biosciences T-cell receptor neoantigen interaction analysis via microfluidics
EP4025711A2 (en) 2019-11-08 2022-07-13 10X Genomics, Inc. Enhancing specificity of analyte binding
WO2021091611A1 (en) 2019-11-08 2021-05-14 10X Genomics, Inc. Spatially-tagged analyte capture agents for analyte multiplexing
EP4055160B1 (en) 2019-11-08 2024-04-10 Becton Dickinson and Company Using random priming to obtain full-length v(d)j information for immune repertoire sequencing
CA3156776A1 (en) 2019-11-08 2021-05-14 xCella Biosciences, Inc. Apparatus and methods for laser-based single cell recovery from microcapillary arrays
CA3157616A1 (en) 2019-11-17 2021-05-20 Darshan THAKER Systems and methods for analyses of biological samples
IT201900024159A1 (it) * 2019-12-16 2021-06-16 Menarini Silicon Biosystems Spa Metodo e kit per amplificazione totale del genoma e analisi di molecole bersaglio in un campione biologico
CN121022991A (zh) 2019-12-23 2025-11-28 10X基因组学有限公司 使用rna模板化连接进行空间分析的方法
EP4081656A1 (en) 2019-12-23 2022-11-02 10X Genomics, Inc. Compositions and methods for using fixed biological samples in partition-based assays
EP4752521A3 (en) 2019-12-23 2026-08-12 10X Genomics, Inc. Reversible fixing reagents and methods of use thereof
US12365942B2 (en) 2020-01-13 2025-07-22 10X Genomics, Inc. Methods of decreasing background on a spatial array
CN115244184A (zh) 2020-01-13 2022-10-25 贝克顿迪金森公司 用于定量蛋白和rna的方法和组合物
CN115279919A (zh) 2020-01-13 2022-11-01 贝克顿迪金森公司 使用含有du的寡核苷酸的细胞捕获
US12405264B2 (en) 2020-01-17 2025-09-02 10X Genomics, Inc. Electrophoretic system and method for analyte capture
US11702693B2 (en) 2020-01-21 2023-07-18 10X Genomics, Inc. Methods for printing cells and generating arrays of barcoded cells
US11732299B2 (en) 2020-01-21 2023-08-22 10X Genomics, Inc. Spatial assays with perturbed cells
US20210230681A1 (en) 2020-01-24 2021-07-29 10X Genomics, Inc. Methods for spatial analysis using proximity ligation
US12577702B2 (en) 2020-01-28 2026-03-17 Plexium, Inc. Oligonucleotide encoded chemical libraries, related systems, devices, and methods for detecting, analyzing, quantifying, and testing biologics/genetics
US11821035B1 (en) 2020-01-29 2023-11-21 10X Genomics, Inc. Compositions and methods of making gene expression libraries
WO2021155057A1 (en) * 2020-01-29 2021-08-05 Becton, Dickinson And Company Barcoded wells for spatial mapping of single cells through sequencing
US12076701B2 (en) 2020-01-31 2024-09-03 10X Genomics, Inc. Capturing oligonucleotides in spatial transcriptomics
US11898205B2 (en) 2020-02-03 2024-02-13 10X Genomics, Inc. Increasing capture efficiency of spatial assays
US12110541B2 (en) 2020-02-03 2024-10-08 10X Genomics, Inc. Methods for preparing high-resolution spatial arrays
US11732300B2 (en) 2020-02-05 2023-08-22 10X Genomics, Inc. Increasing efficiency of spatial analysis in a biological sample
US12129516B2 (en) 2020-02-07 2024-10-29 10X Genomics, Inc. Quantitative and automated permeabilization performance evaluation for spatial transcriptomics
US11835462B2 (en) 2020-02-11 2023-12-05 10X Genomics, Inc. Methods and compositions for partitioning a biological sample
US12281357B1 (en) 2020-02-14 2025-04-22 10X Genomics, Inc. In situ spatial barcoding
US12399123B1 (en) 2020-02-14 2025-08-26 10X Genomics, Inc. Spatial targeting of analytes
CN116157533A (zh) 2020-02-21 2023-05-23 10X基因组学有限公司 使用杂交方法捕获遗传靶标
US11891654B2 (en) 2020-02-24 2024-02-06 10X Genomics, Inc. Methods of making gene expression libraries
US12153043B2 (en) 2020-02-25 2024-11-26 Becton, Dickinson And Company Bi-specific probes to enable the use of single-cell samples as single color compensation control
US11926863B1 (en) 2020-02-27 2024-03-12 10X Genomics, Inc. Solid state single cell method for analyzing fixed biological cells
US11768175B1 (en) 2020-03-04 2023-09-26 10X Genomics, Inc. Electrophoretic methods for spatial analysis
US20230340589A1 (en) * 2020-03-10 2023-10-26 Western Digital Technologies, Inc. Magnetic sensor arrays for nucleic acid sequencing and methods of making and using them
EP4139485B1 (en) 2020-04-22 2023-09-06 10X Genomics, Inc. Methods for spatial analysis using targeted rna depletion
US11702689B2 (en) * 2020-04-24 2023-07-18 Microsoft Technology Licensing, Llc Homopolymer primers for amplification of polynucleotides created by enzymatic synthesis
WO2021231779A1 (en) 2020-05-14 2021-11-18 Becton, Dickinson And Company Primers for immune repertoire profiling
US12416603B2 (en) 2020-05-19 2025-09-16 10X Genomics, Inc. Electrophoresis cassettes and instrumentation
CN115943216A (zh) * 2020-05-20 2023-04-07 耶鲁大学 实现双亚泊松单细胞rna测序的集成介电泳-俘获和纳米阱转移方法
AU2021275906A1 (en) 2020-05-22 2022-12-22 10X Genomics, Inc. Spatial analysis to detect sequence variants
EP4153775B1 (en) 2020-05-22 2024-07-24 10X Genomics, Inc. Simultaneous spatio-temporal measurement of gene expression and cellular activity
WO2021242834A1 (en) 2020-05-26 2021-12-02 10X Genomics, Inc. Method for resetting an array
EP4600376A3 (en) 2020-06-02 2025-10-22 10X Genomics, Inc. Spatial transcriptomics for antigen-receptors
EP4025692A2 (en) 2020-06-02 2022-07-13 10X Genomics, Inc. Nucleic acid library methods
US12265079B1 (en) 2020-06-02 2025-04-01 10X Genomics, Inc. Systems and methods for detecting analytes from captured single biological particles
CN115803445A (zh) 2020-06-02 2023-03-14 贝克顿迪金森公司 用于5撇基因表达测定的寡核苷酸和珠
US12031177B1 (en) 2020-06-04 2024-07-09 10X Genomics, Inc. Methods of enhancing spatial resolution of transcripts
EP4421186B1 (en) 2020-06-08 2025-08-13 10X Genomics, Inc. Methods of determining a surgical margin and methods of use thereof
US12435363B1 (en) 2020-06-10 2025-10-07 10X Genomics, Inc. Materials and methods for spatial transcriptomics
EP4446430A3 (en) 2020-06-10 2024-12-18 10X Genomics, Inc. Methods for determining a location of an analyte in a biological sample
EP4164796A4 (en) 2020-06-10 2024-03-06 10x Genomics, Inc. Fluid delivery methods
EP4450639B1 (en) 2020-06-25 2025-10-15 10X Genomics, Inc. Spatial analysis of dna methylation
US12209280B1 (en) 2020-07-06 2025-01-28 10X Genomics, Inc. Methods of identifying abundance and location of an analyte in a biological sample using second strand synthesis
US11761038B1 (en) 2020-07-06 2023-09-19 10X Genomics, Inc. Methods for identifying a location of an RNA in a biological sample
US11981960B1 (en) 2020-07-06 2024-05-14 10X Genomics, Inc. Spatial analysis utilizing degradable hydrogels
US11932901B2 (en) 2020-07-13 2024-03-19 Becton, Dickinson And Company Target enrichment using nucleic acid probes for scRNAseq
WO2022018055A1 (en) * 2020-07-20 2022-01-27 Westfälische Wilhelms-Universität Münster Circulation method to sequence immune repertoires of individual cells
US11479779B2 (en) 2020-07-31 2022-10-25 Zymergen Inc. Systems and methods for high-throughput automated strain generation for non-sporulating fungi
CN116348613A (zh) * 2020-07-31 2023-06-27 新格元生物科技有限公司 固定细胞的高通量分析
WO2022026909A1 (en) 2020-07-31 2022-02-03 Becton, Dickinson And Company Single cell assay for transposase-accessible chromatin
US12553898B1 (en) 2020-08-10 2026-02-17 10X Genomics, Inc. Fluorescent hybridization of antibody-oligonucleotide for multiplexing and signal amplification
US11981958B1 (en) 2020-08-20 2024-05-14 10X Genomics, Inc. Methods for spatial analysis using DNA capture
CA3189006A1 (en) 2020-09-07 2022-03-10 Matthew Asuka KUBIT Methods of assaying a biological cell
CN116615229A (zh) * 2020-09-07 2023-08-18 伯克利之光生命科技公司 测定生物细胞的方法
CN116194590A (zh) 2020-09-18 2023-05-30 10X基因组学有限公司 样品处理设备和图像配准方法
US11926822B1 (en) 2020-09-23 2024-03-12 10X Genomics, Inc. Three-dimensional spatial analysis
WO2022067494A1 (en) * 2020-09-29 2022-04-07 Singleron (Nanjing) Biotechnologies, Ltd. Method for detection of whole transcriptome in single cells
JP2022058244A (ja) * 2020-09-30 2022-04-11 富佳生技股▲ふん▼有限公司 核酸検出箱及び核酸検出デバイス
TWI781660B (zh) * 2020-09-30 2022-10-21 富佳生技股份有限公司 核酸檢測盒及核酸檢測設備
TWD218529S (zh) * 2020-09-30 2022-05-01 富佳生技股份有限公司 核酸檢測儀之圖形化使用者介面
US20230399637A1 (en) * 2020-11-10 2023-12-14 Colorado State University Research Foundation Crosslinked porous protein crystals with guest barcode dna
US11827935B1 (en) 2020-11-19 2023-11-28 10X Genomics, Inc. Methods for spatial analysis using rolling circle amplification and detection probes
WO2022109343A1 (en) 2020-11-20 2022-05-27 Becton, Dickinson And Company Profiling of highly expressed and lowly expressed proteins
CN116685850A (zh) 2020-12-15 2023-09-01 贝克顿迪金森公司 单细胞分泌组分析
WO2022140028A1 (en) 2020-12-21 2022-06-30 10X Genomics, Inc. Methods, compositions, and systems for capturing probes and/or barcodes
EP4269615A4 (en) * 2020-12-25 2025-01-08 Intelligent Healthcare Technology Limited BIOCHIP FOR SPATIAL LOCALIZATION TRANSCRIPTOMIC ANALYSIS, ITS MANUFACTURING METHOD AND APPLICATION
WO2022147239A1 (en) * 2020-12-31 2022-07-07 Yale University High-spatial-resolution epigenomic profiling
US12576399B2 (en) 2021-01-08 2026-03-17 Cellanome, Inc. Methods for imaging and analyzing a cell in a compartment of a fluidic device
US12576400B2 (en) 2021-01-08 2026-03-17 Cellanome, Inc. Methods for incubating and analyzing a cell in a compartment of a fluidic device
ES2989523T3 (es) 2021-02-19 2024-11-26 10X Genomics Inc Método de uso de un dispositivo modular de soporte para ensayos
US20240141326A1 (en) * 2021-02-24 2024-05-02 California Institute Of Technology Multiplexing of experimental conditions and samples in spatial genomics
EP4524261B1 (en) 2021-03-18 2026-07-22 10X Genomics, Inc. Multiplex capture of gene and protein expression from a biological sample
EP4305196B1 (en) 2021-04-14 2025-04-02 10X Genomics, Inc. Methods of measuring mislocalization of an analyte
EP4320271B1 (en) 2021-05-06 2025-03-19 10X Genomics, Inc. Methods for increasing resolution of spatial analysis
EP4092133A1 (en) * 2021-05-21 2022-11-23 SCellex Oy Methods and constructs for locating and profiling single cells in a biological sample
ES3030033T3 (en) 2021-06-03 2025-06-26 10X Genomics Inc Methods, compositions, kits, and systems for enhancing analyte capture for spatial analysis
KR102792051B1 (ko) 2021-07-30 2025-04-09 연세대학교 산학협력단 연속적인 매질에서 세포간 구획화를 하지 않는 방식의 단일세포 전사체 분석방법
US12553805B2 (en) 2021-08-02 2026-02-17 10X Genomics, Inc. Methods of preserving a biological sample
CN113684249B (zh) * 2021-08-25 2024-10-22 广州达安基因股份有限公司 一种rna和dna二代测序文库的构建方法及二代测序盒
WO2023034489A1 (en) 2021-09-01 2023-03-09 10X Genomics, Inc. Methods, compositions, and kits for blocking a capture probe on a spatial array
WO2023028954A1 (zh) * 2021-09-02 2023-03-09 新格元(南京)生物科技有限公司 高通量单细胞靶向测序的试剂和方法
EP4419707A1 (en) 2021-11-10 2024-08-28 10X Genomics, Inc. Methods, compositions, and kits for determining the location of an analyte in a biological sample
EP4305195A2 (en) 2021-12-01 2024-01-17 10X Genomics, Inc. Methods, compositions, and systems for improved in situ detection of analytes and spatial analysis
EP4441711A1 (en) 2021-12-20 2024-10-09 10X Genomics, Inc. Self-test for pathology/histology slide imaging device
US12661647B2 (en) 2022-03-22 2026-06-23 Cellanome, Inc. Methods for enclosing and analyzing a cell in a fluidic device
US12637706B2 (en) 2022-03-23 2026-05-26 10X Genomics, Inc. Methods and compositions related to microsphere surface gelation
CN114891779A (zh) * 2022-03-31 2022-08-12 立凌生物制药(苏州)有限公司 一种克隆tcr序列的检测方法及其应用
WO2023236121A1 (zh) * 2022-06-08 2023-12-14 深圳华大生命科学研究院 检测罕见细胞的方法、装置及其应用
EP4685239A1 (en) 2022-11-09 2026-01-28 10X Genomics, Inc. Methods, compositions, and kits for determining the location of multiple analytes in a biological sample
WO2025059212A1 (en) * 2023-09-12 2025-03-20 Cache Dna, Inc. Multiplexed signal amplification for selection of barcoded microparticles
WO2025102355A1 (en) * 2023-11-17 2025-05-22 Singleron (Nanjing) Biotechnologies, Ltd. Methods and reagents for high-throughput single cell full length rna analysis
US12147865B1 (en) * 2024-02-02 2024-11-19 Michael Buck Method for identifying a physical object using an object identification code
WO2025231451A1 (en) * 2024-05-03 2025-11-06 Cellanome, Inc. Systems and methods for analysis of cells

Family Cites Families (28)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6294063B1 (en) 1999-02-12 2001-09-25 Board Of Regents, The University Of Texas System Method and apparatus for programmable fluidic processing
US6942776B2 (en) 1999-05-18 2005-09-13 Silicon Biosystems S.R.L. Method and apparatus for the manipulation of particles by means of dielectrophoresis
US6958132B2 (en) 2002-05-31 2005-10-25 The Regents Of The University Of California Systems and methods for optical actuation of microfluidics based on opto-electrowetting
US20040086892A1 (en) * 2002-11-06 2004-05-06 Crothers Donald M. Universal tag assay
US6977153B2 (en) * 2002-12-31 2005-12-20 Qiagen Gmbh Rolling circle amplification of RNA
JP2007521833A (ja) 2004-02-12 2007-08-09 コンパス ジェネティクス エルエルシー 配列特異的分類による遺伝的分析
WO2005100541A2 (en) 2004-04-12 2005-10-27 The Regents Of The University Of California Optoelectronic tweezers for microparticle and cell manipulation
CN101374757B (zh) * 2005-11-22 2012-11-14 迈克罗拉布诊断有限公司 流控结构、装置、方法和仪器配置的方法
US8685344B2 (en) 2007-01-22 2014-04-01 Advanced Liquid Logic, Inc. Surface assisted fluid loading and droplet dispensing
WO2008119066A1 (en) 2007-03-28 2008-10-02 The Regents Of The University Of California Single-sided lateral-field and phototransistor-based optoelectronic tweezers
US9434997B2 (en) * 2007-08-24 2016-09-06 Lawrence Livermore National Security, Llc Methods, compounds and systems for detecting a microorganism in a sample
US9533306B2 (en) 2010-08-02 2017-01-03 The Regents Of The University Of California Single sided continuous optoelectrowetting (SCEOW) device for droplet manipulation with light patterns
US9227200B2 (en) 2011-06-03 2016-01-05 The Regents Of The University Of California Microfluidic devices with flexible optically transparent electrodes
CN105861487B (zh) * 2012-01-26 2020-05-05 纽亘技术公司 用于靶向核酸序列富集和高效文库产生的组合物和方法
CA2877094A1 (en) * 2012-06-18 2013-12-27 Nugen Technologies, Inc. Compositions and methods for negative selection of non-desired nucleic acid sequences
WO2014047561A1 (en) 2012-09-21 2014-03-27 The Broad Institute Inc. Compositions and methods for labeling of agents
US9857333B2 (en) 2012-10-31 2018-01-02 Berkeley Lights, Inc. Pens for biological micro-objects
US9403172B2 (en) 2012-11-08 2016-08-02 Berkeley Lights, Inc. Circuit based optoelectronic tweezers
KR102368591B1 (ko) * 2013-04-30 2022-02-25 캘리포니아 인스티튜트 오브 테크놀로지 순차적 하이브리드화 바코딩에 의한 분자의 멀티플렉스 표지화
CN111500680B (zh) * 2013-06-25 2024-04-16 普罗格诺西斯生物科学公司 检测样品中生物靶标的空间分布的方法和系统
KR102221894B1 (ko) * 2013-10-22 2021-03-03 버클리 라잇츠, 인크. 격리 펜을 갖는 미세유체 소자 및 이를 사용한 생물학적 미세 물체를 시험하는 방법
US9889445B2 (en) 2013-10-22 2018-02-13 Berkeley Lights, Inc. Micro-fluidic devices for assaying biological activity
EP3134536B1 (en) * 2014-04-21 2019-12-18 President and Fellows of Harvard College Systems and methods for barcoding nucleic acids
US20150306599A1 (en) 2014-04-25 2015-10-29 Berkeley Lights, Inc. Providing DEP Manipulation Devices And Controllable Electrowetting Devices In The Same Microfluidic Apparatus
US20150306598A1 (en) 2014-04-25 2015-10-29 Berkeley Lights, Inc. DEP Force Control And Electrowetting Control In Different Sections Of The Same Microfluidic Apparatus
AU2015249294B2 (en) 2014-04-25 2020-02-27 Berkeley Lights, Inc. Providing DEP manipulation devices and controllable electrowetting devices in the same microfluidic apparatus
US10017759B2 (en) * 2014-06-26 2018-07-10 Illumina, Inc. Library preparation of tagged nucleic acid
US11873483B2 (en) 2015-03-11 2024-01-16 The Broad Institute, Inc. Proteomic analysis with nucleic acid identifiers

Similar Documents

Publication Publication Date Title
US20250092457A1 (en) Methods and compositions for single cell genomics
US20240318227A1 (en) Immunological analysis methods
US10400273B2 (en) System and method for single cell genetic analysis
RU2733545C2 (ru) Пространственное картирование молекулярных профилей образцов биологических тканей
EP3458606B1 (en) Methods for identification of samples
JP2022506546A5 (cg-RX-API-DMAC10.html)
US20160228841A2 (en) Methods and compositions for tagging and analyzing samples
JP2010537643A (ja) 代替的な核酸配列決定法
EP2762562A1 (en) Method for detecting target nucleic acid
Zhou et al. Encoding method of single-cell spatial transcriptomics sequencing
JP2007500013A5 (cg-RX-API-DMAC10.html)
US20170166959A1 (en) Method For Analyzing Nucleic Acid Derived From Single Cell
CN110869515B (zh) 用于基因组重排检测的测序方法
NZ334426A (en) Characterising cDNA comprising cutting sample cDNAs with a first endonuclease, sorting fragments according to the un-paired ends of the DNA, cutting with a second endonuclease then sorting the fragments
CN103820558B (zh) 一种用于检测海产品中九种致病性弧菌的基因芯片
JP2015533503A5 (cg-RX-API-DMAC10.html)
WO2022254250A1 (en) Method and system for integrating morphological characteristics and gene expression of single-cell
CN106192023A (zh) 一种基于多维Index的多重测序文库构建方法
CN107881215B (zh) 侦测核苷酸片段的方法
WO2025170946A1 (en) Deterministic barcoding for spatial profiling
CN201096715Y (zh) 一种检测移植肾功能的寡核苷酸芯片
CN114686569A (zh) 一种检测信号通路相关基因rna表达的基因芯片及其使用方法
A Narvaez-Zapata et al. Recent Advances and Novel Applications in Microbial Diversity Estimation Based on DNA Analysis Methods
Ballantyne et al. The uses of saliva in forensic genetics
CN107022609A (zh) 一种大鳍弹涂鱼dna条形码标准检测序列及其应用