JP2017533710A5 - - Google Patents

Download PDF

Info

Publication number
JP2017533710A5
JP2017533710A5 JP2017524429A JP2017524429A JP2017533710A5 JP 2017533710 A5 JP2017533710 A5 JP 2017533710A5 JP 2017524429 A JP2017524429 A JP 2017524429A JP 2017524429 A JP2017524429 A JP 2017524429A JP 2017533710 A5 JP2017533710 A5 JP 2017533710A5
Authority
JP
Japan
Prior art keywords
capture
primer
well
layer
primer pair
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP2017524429A
Other languages
English (en)
Japanese (ja)
Other versions
JP2017533710A (ja
JP7032930B2 (ja
Filing date
Publication date
Application filed filed Critical
Priority claimed from PCT/EP2015/076353 external-priority patent/WO2016075204A1/en
Publication of JP2017533710A publication Critical patent/JP2017533710A/ja
Publication of JP2017533710A5 publication Critical patent/JP2017533710A5/ja
Priority to JP2021213441A priority Critical patent/JP7323598B2/ja
Application granted granted Critical
Publication of JP7032930B2 publication Critical patent/JP7032930B2/ja
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

JP2017524429A 2014-11-11 2015-11-11 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ Active JP7032930B2 (ja)

Priority Applications (1)

Application Number Priority Date Filing Date Title
JP2021213441A JP7323598B2 (ja) 2014-11-11 2021-12-27 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201462078346P 2014-11-11 2014-11-11
US62/078,346 2014-11-11
US201462096464P 2014-12-23 2014-12-23
US62/096,464 2014-12-23
PCT/EP2015/076353 WO2016075204A1 (en) 2014-11-11 2015-11-11 Methods and arrays for producing and sequencing monoclonal clusters of nucleic acid

Related Child Applications (1)

Application Number Title Priority Date Filing Date
JP2021213441A Division JP7323598B2 (ja) 2014-11-11 2021-12-27 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ

Publications (3)

Publication Number Publication Date
JP2017533710A JP2017533710A (ja) 2017-11-16
JP2017533710A5 true JP2017533710A5 (https=) 2018-12-20
JP7032930B2 JP7032930B2 (ja) 2022-03-09

Family

ID=54540094

Family Applications (2)

Application Number Title Priority Date Filing Date
JP2017524429A Active JP7032930B2 (ja) 2014-11-11 2015-11-11 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ
JP2021213441A Active JP7323598B2 (ja) 2014-11-11 2021-12-27 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ

Family Applications After (1)

Application Number Title Priority Date Filing Date
JP2021213441A Active JP7323598B2 (ja) 2014-11-11 2021-12-27 核酸のモノクローナルクラスターの生成および配列決定のための方法およびアレイ

Country Status (13)

Country Link
US (3) US10619204B2 (https=)
EP (1) EP3218511B1 (https=)
JP (2) JP7032930B2 (https=)
KR (1) KR102590448B1 (https=)
CN (1) CN107208019B (https=)
AU (1) AU2015345125B2 (https=)
DK (1) DK3218511T3 (https=)
ES (1) ES2802405T3 (https=)
MY (1) MY182476A (https=)
PL (1) PL3218511T3 (https=)
PT (1) PT3218511T (https=)
SG (2) SG10202004350TA (https=)
WO (1) WO2016075204A1 (https=)

Families Citing this family (58)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ES2625288T3 (es) 2011-04-15 2017-07-19 The Johns Hopkins University Sistema de secuenciación segura
AU2013338393C1 (en) 2012-10-29 2024-07-25 The Johns Hopkins University Papanicolaou test for ovarian and endometrial cancers
AU2014296253A1 (en) 2013-07-30 2016-02-04 President And Fellows Of Harvard College Quantitative DNA-based imaging and super-resolution imaging
US10415083B2 (en) 2013-10-28 2019-09-17 The Translational Genomics Research Institute Long insert-based whole genome sequencing
DK3218511T3 (da) 2014-11-11 2020-07-20 Illumina Cambridge Ltd Fremgangsmåder og arrays til frembringelse og sekventering af monoklonale klynger af nukleinsyre
US20180057873A1 (en) * 2015-04-17 2018-03-01 Centrillion Technology Holdings Corporation Methods for performing spatial profiling of biological materials
US20180224461A1 (en) * 2015-08-07 2018-08-09 President And Fellows Of Harvard College Super resolution imaging of protein-protein interactions
US11286531B2 (en) 2015-08-11 2022-03-29 The Johns Hopkins University Assaying ovarian cyst fluid
JP2017209051A (ja) * 2016-05-25 2017-11-30 株式会社ニコン 標的生体分子の検出方法、標的生体分子検出用基板、及び標的生体分子検出装置
US20180195115A1 (en) 2016-12-22 2018-07-12 Illumina, Inc. Arrays with quality control tracers
GB201704754D0 (en) 2017-01-05 2017-05-10 Illumina Inc Kinetic exclusion amplification of nucleic acid libraries
NL2019044B1 (en) 2017-05-11 2018-11-15 Illumina Inc Protective surface coatings for flow cells
WO2018218136A1 (en) * 2017-05-25 2018-11-29 Integrated Dna Technologies, Inc. Reverse complement adapters for the mitigation of umi hopping
US11001885B2 (en) 2017-06-13 2021-05-11 Personal Genomics Taiwan, Inc. Apparatus for single molecular sequencing and method of sequencing nucleic acid molecules
IL319255A (en) 2017-08-07 2025-04-01 Univ Johns Hopkins Methods and materials for cancer assessment and treatment
CN107523640A (zh) * 2017-10-12 2017-12-29 厦门燕旭安生物科技有限公司 一种ctDNA精准测序的扩增子文库构建方法
IL271026B2 (en) * 2017-12-21 2024-11-01 Illumina Inc Flow cells with hydrogel coating
JP2021525095A (ja) * 2018-05-28 2021-09-24 エフ.ホフマン−ラ ロシュ アーゲーF. Hoffmann−La Roche Aktiengesellschaft Dna−ポア−ポリメラーゼ複合体の酵素的濃縮
US11124829B2 (en) * 2018-06-29 2021-09-21 Illumina, Inc. Flow cells
TWI730352B (zh) 2018-08-06 2021-06-11 英商伊路米納劍橋有限公司 流體槽與定序系統及製備用於其之基板的方法
US20200149095A1 (en) * 2018-11-14 2020-05-14 Element Biosciences, Inc. Low binding supports for improved solid-phase dna hybridization and amplification
SG11202012762WA (en) 2018-12-05 2021-01-28 Illumina Cambridge Ltd Methods and compositions for cluster generation by bridge amplification
WO2020126602A1 (en) 2018-12-18 2020-06-25 Illumina Cambridge Limited Methods and compositions for paired end sequencing using a single surface primer
EP3899037B1 (en) * 2018-12-19 2023-10-18 Illumina, Inc. Methods for improving polynucleotide cluster clonality priority
TWI873119B (zh) * 2019-01-29 2025-02-21 美商伊路米納有限公司 流通槽及製備其之方法
TWI857001B (zh) 2019-01-29 2024-10-01 美商伊路米納有限公司 定序套組
TWI857000B (zh) 2019-01-29 2024-10-01 美商伊路米納有限公司 流體槽以及將複合物引入至流體槽之方法
WO2020241829A1 (ja) 2019-05-31 2020-12-03 日本電気株式会社 情報処理装置、情報処理方法及び情報処理プログラム
CN112654719A (zh) * 2019-05-31 2021-04-13 伊鲁米纳公司 使用流动池进行信息存储和检索的系统和方法
TW202120693A (zh) * 2019-08-21 2021-06-01 美商伊路米納有限公司 偵測核苷酸之聚合酶併入的方法
IL286668B1 (en) 2019-12-16 2026-04-01 Illumina Cambridge Ltd Kits and flow cells
KR20220116388A (ko) * 2019-12-20 2022-08-23 일루미나, 인코포레이티드 플로우 셀
PH12021553295A1 (en) * 2019-12-23 2022-08-01 Illumina Cambridge Ltd Nanoparticle with single site for template polynucleotide attachment
JP2023513606A (ja) 2020-02-14 2023-03-31 ザ・ジョンズ・ホプキンス・ユニバーシティー 核酸を評価するための方法および材料
WO2021168097A1 (en) * 2020-02-19 2021-08-26 Genapsys, Inc. Methods and systems for nucleic acid processing
MX2021015806A (es) * 2020-02-26 2022-04-27 Illumina Inc Kits para genotipificacion.
AU2021230282A1 (en) * 2020-03-03 2022-09-22 Pacific Biosciences Of California, Inc. Methods and compositions for sequencing double stranded nucleic acids
EP3969612B1 (en) * 2020-03-09 2024-10-30 Illumina, Inc. Improvements in nucleic acid sequencing
KR20230035237A (ko) 2020-05-12 2023-03-13 일루미나, 인코포레이티드 재조합 말단 데옥시뉴클레오티딜 트랜스퍼라제를 사용하여 변형된 염기를 갖는 핵산의 생성
KR20230069047A (ko) * 2020-09-14 2023-05-18 일루미나, 인코포레이티드 폴리뉴클레오티드를 증폭시키기 위한 조성물 및 방법
CN115803112A (zh) * 2020-09-29 2023-03-14 伊鲁米纳公司 用于制造流通池的方法
AU2021352376A1 (en) * 2020-09-29 2023-01-05 Illumina, Inc. Flow cells and methods for making the same
TW202232084A (zh) * 2020-12-10 2022-08-16 美商伊路米納有限公司 影像感測器結構及相關方法
US20220195516A1 (en) * 2020-12-17 2022-06-23 Illumina Cambridge Limited Methods, systems and compositions for nucleic acid sequencing
EP4263868A4 (en) * 2021-03-12 2024-11-27 Singular Genomics Systems, Inc. NANONETWORKS AND METHODS OF USE THEREOF
US11884977B2 (en) 2021-03-12 2024-01-30 Singular Genomics Systems, Inc. Nanoarrays and methods of use thereof
CN117222752A (zh) * 2021-04-30 2023-12-12 伊鲁米纳剑桥有限公司 流通池和方法
WO2022240764A1 (en) * 2021-05-10 2022-11-17 Pacific Biosciences Of California, Inc. Single-molecule seeding and amplification on a surface
WO2024006625A1 (en) * 2022-06-27 2024-01-04 Somalogic Operating Co., Inc. Monoclonal polony generation using nucleic acid supramolecular structures
US20240076722A1 (en) * 2022-06-29 2024-03-07 10X Genomics, Inc. Compositions and methods for oligonucleotide inversion on arrays
CN116024320A (zh) * 2022-07-13 2023-04-28 上海翔琼生物技术有限公司 一种用于检测核酸的荧光定量pcr方法
WO2024057089A1 (en) * 2022-09-09 2024-03-21 Todx Inc. Device for parallel detection and quantification of nucleic acid based markers
US20240124916A1 (en) * 2022-09-16 2024-04-18 Illumina Cambridge Limited Nanoparticle with polynucleotide binding site and method of making thereof
WO2024256580A1 (en) * 2023-06-14 2024-12-19 Illumina, Inc. Concurrent sequencing with spatially separated rings
WO2025062001A1 (en) * 2023-09-20 2025-03-27 Illumina, Inc. Optimised nucleic acid sequencing
WO2025128699A1 (en) 2023-12-12 2025-06-19 Illumina, Inc. Capturing and amplifying polynucleotides using molecules and particles
US20250207193A1 (en) * 2023-12-22 2025-06-26 Illumina, Inc. Reusable flow cells and methods of using them for nucleic acid sequencing
CN117778578B (zh) * 2023-12-29 2024-10-15 深圳海普洛斯医学检验实验室 一种基于高通量测序检测目标基因甲基化程度的引物组合物及其应用

Family Cites Families (45)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2044616A1 (en) 1989-10-26 1991-04-27 Roger Y. Tsien Dna sequencing
US5223414A (en) 1990-05-07 1993-06-29 Sri International Process for nucleic acid hybridization and amplification
US5846719A (en) 1994-10-13 1998-12-08 Lynx Therapeutics, Inc. Oligonucleotide tags for sorting and identification
US5750341A (en) 1995-04-17 1998-05-12 Lynx Therapeutics, Inc. DNA sequencing by parallel oligonucleotide extensions
GB9620209D0 (en) 1996-09-27 1996-11-13 Cemu Bioteknik Ab Method of sequencing DNA
GB9626815D0 (en) 1996-12-23 1997-02-12 Cemu Bioteknik Ab Method of sequencing DNA
JP2002503954A (ja) 1997-04-01 2002-02-05 グラクソ、グループ、リミテッド 核酸増幅法
US6969488B2 (en) 1998-05-22 2005-11-29 Solexa, Inc. System and apparatus for sequential processing of analytes
US6274320B1 (en) 1999-09-16 2001-08-14 Curagen Corporation Method of sequencing a nucleic acid
US6770441B2 (en) 2000-02-10 2004-08-03 Illumina, Inc. Array compositions and methods of making same
US7001792B2 (en) 2000-04-24 2006-02-21 Eagle Research & Development, Llc Ultra-fast nucleic acid sequencing device and a method for making and using the same
WO2002004680A2 (en) 2000-07-07 2002-01-17 Visigen Biotechnologies, Inc. Real-time sequence determination
US7211414B2 (en) 2000-12-01 2007-05-01 Visigen Biotechnologies, Inc. Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity
US7057026B2 (en) 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
US7399590B2 (en) 2002-02-21 2008-07-15 Asm Scientific, Inc. Recombinase polymerase amplification
EP3002289B1 (en) 2002-08-23 2018-02-28 Illumina Cambridge Limited Modified nucleotides for polynucleotide sequencing
JP4632788B2 (ja) 2002-09-20 2011-02-16 ニュー・イングランド・バイオラブズ・インコーポレイティッド 核酸のヘリカーゼ依存性増幅
GB0321306D0 (en) 2003-09-11 2003-10-15 Solexa Ltd Modified polymerases for improved incorporation of nucleotide analogues
EP1701785A1 (en) 2004-01-07 2006-09-20 Solexa Ltd. Modified molecular arrays
US7315019B2 (en) 2004-09-17 2008-01-01 Pacific Biosciences Of California, Inc. Arrays of optical confinements and uses thereof
WO2006064199A1 (en) 2004-12-13 2006-06-22 Solexa Limited Improved method of nucleotide detection
US7682816B2 (en) * 2005-04-07 2010-03-23 454 Life Sciences Corporation Thin film coated microwell arrays and methods of using same
WO2006120433A1 (en) 2005-05-10 2006-11-16 Solexa Limited Improved polymerases
GB0514936D0 (en) 2005-07-20 2005-08-24 Solexa Ltd Preparation of templates for nucleic acid sequencing
US7405281B2 (en) 2005-09-29 2008-07-29 Pacific Biosciences Of California, Inc. Fluorescent nucleotide analogs and uses therefor
EP3722409A1 (en) 2006-03-31 2020-10-14 Illumina, Inc. Systems and devices for sequence by synthesis analysis
US8343746B2 (en) 2006-10-23 2013-01-01 Pacific Biosciences Of California, Inc. Polymerase enzymes and reagents for enhanced nucleic acid sequencing
US7948015B2 (en) 2006-12-14 2011-05-24 Life Technologies Corporation Methods and apparatus for measuring analytes using large scale FET arrays
US8262900B2 (en) 2006-12-14 2012-09-11 Life Technologies Corporation Methods and apparatus for measuring analytes using large scale FET arrays
US8349167B2 (en) 2006-12-14 2013-01-08 Life Technologies Corporation Methods and apparatus for detecting molecular interactions using FET arrays
WO2008157640A2 (en) 2007-06-18 2008-12-24 Illumina, Inc. Microfabrication methods for the optimal patterning of substrates
WO2010038042A1 (en) 2008-10-02 2010-04-08 Illumina Cambridge Ltd. Nucleic acid sample enrichment for sequencing applications
US20100137143A1 (en) 2008-10-22 2010-06-03 Ion Torrent Systems Incorporated Methods and apparatus for measuring analytes
CA2770389C (en) 2009-08-25 2015-12-29 Illumina, Inc. Methods for selecting and amplifying polynucleotides
US8951781B2 (en) 2011-01-10 2015-02-10 Illumina, Inc. Systems, methods, and apparatuses to image a sample for biological or chemical analysis
EP2718465B1 (en) 2011-06-09 2022-04-13 Illumina, Inc. Method of making an analyte array
CA2859660C (en) 2011-09-23 2021-02-09 Illumina, Inc. Methods and compositions for nucleic acid sequencing
CA2856163C (en) * 2011-10-28 2019-05-07 Illumina, Inc. Microarray fabrication system and method
EP2834622B1 (en) 2012-04-03 2023-04-12 Illumina, Inc. Integrated optoelectronic read head and fluidic cartridge useful for nucleic acid sequencing
US9012022B2 (en) 2012-06-08 2015-04-21 Illumina, Inc. Polymer coatings
US8895249B2 (en) 2012-06-15 2014-11-25 Illumina, Inc. Kinetic exclusion amplification of nucleic acid libraries
US9512422B2 (en) * 2013-02-26 2016-12-06 Illumina, Inc. Gel patterned surfaces
EP3572875A1 (en) * 2013-12-19 2019-11-27 Illumina, Inc. Roll-to-roll process of preparing a patterned substrate and patterned substrate prepared by the same process
HK1225758A1 (zh) 2014-01-16 2017-09-15 Illumina, Inc. 固体支持物上的扩增子制备和测序
DK3218511T3 (da) 2014-11-11 2020-07-20 Illumina Cambridge Ltd Fremgangsmåder og arrays til frembringelse og sekventering af monoklonale klynger af nukleinsyre

Similar Documents

Publication Publication Date Title
JP2017533710A5 (https=)
MY182476A (en) Methods and arrays for producing and sequencing monoclonal clusters of nucleic acid
JP2015511818A5 (https=)
JP2015156872A5 (https=)
AU2014377372B2 (en) Polynucleotide modification on solid support
JP2018139607A5 (https=)
JP2016027959A5 (https=)
JP2020022453A5 (https=)
JP2018046848A5 (https=)
JP2016508715A5 (https=)
JP2010529857A5 (https=)
JP2011507488A5 (https=)
JP2016527313A5 (https=)
JP2014503207A5 (https=)
JP2014520525A5 (https=)
CA2852300C (en) Hydrolysis probes
JP2017537658A5 (https=)
JP2013532494A5 (https=)
JP2018512847A5 (https=)
WO2007011722A3 (en) Reaction discovery system
JP2010519896A5 (https=)
JP2017526347A5 (https=)
JP7733382B2 (ja) 標的ポリヌクレオチドを検出するための方法
WO2009145836A8 (en) Methods and devices based upon a novel form of nucleic acid duplex on a surface
JP2017514478A5 (https=)