FI121884B - Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus - Google Patents

Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus Download PDF

Info

Publication number
FI121884B
FI121884B FI20085041A FI20085041A FI121884B FI 121884 B FI121884 B FI 121884B FI 20085041 A FI20085041 A FI 20085041A FI 20085041 A FI20085041 A FI 20085041A FI 121884 B FI121884 B FI 121884B
Authority
FI
Finland
Prior art keywords
seq
specific
gyrb
pare
complementary
Prior art date
Application number
FI20085041A
Other languages
English (en)
Finnish (fi)
Swedish (sv)
Other versions
FI20085041A0 (fi
FI20085041A (fi
Inventor
Minna-Mari Maeki
Laura Huopaniemi
Anna-Kaarina Jaervinen
Juha Kirveskari
Jari Jalava
Original Assignee
Mobidiag Oy
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Mobidiag Oy filed Critical Mobidiag Oy
Priority to FI20085041A priority Critical patent/FI121884B/fi
Publication of FI20085041A0 publication Critical patent/FI20085041A0/fi
Priority to EP20090702463 priority patent/EP2240607B8/fr
Priority to PCT/FI2009/050036 priority patent/WO2009090310A1/fr
Publication of FI20085041A publication Critical patent/FI20085041A/fi
Application granted granted Critical
Publication of FI121884B publication Critical patent/FI121884B/fi

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays
FI20085041A 2008-01-17 2008-01-17 Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus FI121884B (fi)

Priority Applications (3)

Application Number Priority Date Filing Date Title
FI20085041A FI121884B (fi) 2008-01-17 2008-01-17 Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus
EP20090702463 EP2240607B8 (fr) 2008-01-17 2009-01-16 Procédé de détection et d'identification de staphylocoques
PCT/FI2009/050036 WO2009090310A1 (fr) 2008-01-17 2009-01-16 Procédé de détection et d'identification de staphylocoques

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
FI20085041 2008-01-17
FI20085041A FI121884B (fi) 2008-01-17 2008-01-17 Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus

Publications (3)

Publication Number Publication Date
FI20085041A0 FI20085041A0 (fi) 2008-01-17
FI20085041A FI20085041A (fi) 2009-07-18
FI121884B true FI121884B (fi) 2011-05-31

Family

ID=39004341

Family Applications (1)

Application Number Title Priority Date Filing Date
FI20085041A FI121884B (fi) 2008-01-17 2008-01-17 Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus

Country Status (3)

Country Link
EP (1) EP2240607B8 (fr)
FI (1) FI121884B (fr)
WO (1) WO2009090310A1 (fr)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2348042A1 (fr) 2001-06-04 2002-12-04 Ann Huletsky Sequences permettant de detecter et d'identifier des staphylococcus aureus resistant a la meticilline
US11834720B2 (en) 2005-10-11 2023-12-05 Geneohm Sciences, Inc. Sequences for detection and identification of methicillin-resistant Staphylococcus aureus (MRSA) of MREJ types xi to xx
EP2657351B1 (fr) 2007-12-21 2018-06-20 Biomerieux Sa Détection de Staphylococcus aureus résistant à la méthicilline
CN104169437B (zh) 2011-12-23 2017-07-11 生物梅里埃公司 甲氧西林抗性金黄色葡萄球菌的mecA变体菌株的检测

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3957338B2 (ja) 1996-02-23 2007-08-15 株式会社カイノス 診断薬
US7135283B1 (en) * 1998-11-17 2006-11-14 Nanogen, Inc. Topoisomerase type II gene polymorphisms and their use in identifying drug resistance and pathogenic strains of microorganisms
KR20040052455A (ko) * 2001-11-08 2004-06-23 산코 준야쿠 가부시키가이샤 유전자 증폭 반응으로 합성된 올리고뉴클레오티드에 의한자기집합체의 형성 방법, 자기집합체 및 유전자의 검출방법
DE10244456A1 (de) * 2002-09-24 2004-04-15 Hain Lifescience Gmbh Verfahren zum Nachweis und Differenzierung von Bakterien
FI113549B (fi) * 2002-11-19 2004-05-14 Mobidiag Oy Diagnostinen menetelmä hengitystieinfektioita aiheuttavien bakteerien osoittamiseksi ja tunnistamiseksi ja menetelmässä käyttökelpoinen alukeseos
US20070031850A1 (en) * 2003-06-05 2007-02-08 Mounts William M Nucleic acid arrays for detecting multiple strains of a non-viral species
JP2006271370A (ja) * 2005-03-02 2006-10-12 Kitasato Inst:The 黄色ブドウ球菌とメチシリン耐性菌の検出方法及びキット
JP2009505651A (ja) 2005-08-26 2009-02-12 コーニンクレッカ フィリップス エレクトロニクス エヌ ヴィ 微生物および抗生物質耐性マーカーの検出の方法およびそのための核酸オリゴヌクレオチド
WO2007120808A2 (fr) * 2006-04-14 2007-10-25 Biohelix Corporation Procede d'amplification helicase-dependante asymetrique destinee a la detection de cibles par sondes
KR100868765B1 (ko) * 2006-09-29 2008-11-17 삼성전자주식회사 항생제 내성 박테리아의 표적 서열을 증폭시킬 수 있는프라이머 세트, 박테리아의 표적 서열에 특이적으로혼성화하는 프로브 세트, 상기 프로브 세트가 고정화되어있는 마이크로어레이 및 상기 프로브 세트를 이용하여박테리아의 존재를 검출하는 방법

Also Published As

Publication number Publication date
EP2240607B1 (fr) 2015-04-01
EP2240607B8 (fr) 2015-05-06
FI20085041A0 (fi) 2008-01-17
EP2240607A1 (fr) 2010-10-20
FI20085041A (fi) 2009-07-18
WO2009090310A1 (fr) 2009-07-23

Similar Documents

Publication Publication Date Title
US7205104B2 (en) Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays
Barken et al. Advances in nucleic acid-based diagnostics of bacterial infections
Rasooly et al. Food microbial pathogen detection and analysis using DNA microarray technologies
EP1788098A1 (fr) Création des sondes de capture pour la détection a haute sensitivité des produits d'une reaction d'amplification
US7202026B2 (en) Identification of a large number of biological (micro)organisms groups at different levels by their detection on a same array
JP5851395B2 (ja) 食中毒菌検出用担体、及び食中毒菌の検出方法
FI121428B (fi) Laajakirjoisia alukkeita, testipakkaus ja menetelmä bakteerilajien havaitsemiseksi ja tunnistamiseksi
WO2006097233A2 (fr) Determination de la resistance aux antibiotiques du staphylocoque dore
FI121884B (fi) Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus
EP1602735A2 (fr) Méthode et kit de détection et/ou de quantification de séquences nucléotidiques homologues sur un réseau
JP2007512021A5 (fr)
JP5916740B2 (ja) 核酸標的の定量的多重同定
EP1565573B1 (fr) Sondes d'acide nucleique et amorces a large spectre provenant de regions de genes de la topoisomerase, et procedes utilisant celles-ci
US20080026370A1 (en) Method For Geno-And Pathotyping Pseudomonas Aeruginosa
US20100167956A1 (en) Dna chip for detection of escherichia coli
US20060281112A1 (en) Design of capture molecules for the detection of amplicons with high sensitivity
EP4130275A1 (fr) Ensemble d'amorces et sonde pour détection de staphylococcus argenteus
WO2007132001A1 (fr) Conception de molécules de capture destinée à la détection d'amplicons à haute sensibilité
EP1529848B1 (fr) Substances, séquences et méthodes pour l'identification de souches de Staphylococcus aureus épidémiques résistantes à la Méthicilline
US20070059714A1 (en) Detection of presence and antibiotic susceptibility of enterococci
EP2240608B1 (fr) Procédé de production d'adn monocaténaire
EP2027289A1 (fr) Conception de molécules de capture destinée à la détection d'amplicons à haute sensibilité

Legal Events

Date Code Title Description
FG Patent granted

Ref document number: 121884

Country of ref document: FI