EP3458441B1 - Process for the manufacture of 6-alkynyl-pyridine derivatives - Google Patents
Process for the manufacture of 6-alkynyl-pyridine derivatives Download PDFInfo
- Publication number
- EP3458441B1 EP3458441B1 EP17726859.6A EP17726859A EP3458441B1 EP 3458441 B1 EP3458441 B1 EP 3458441B1 EP 17726859 A EP17726859 A EP 17726859A EP 3458441 B1 EP3458441 B1 EP 3458441B1
- Authority
- EP
- European Patent Office
- Prior art keywords
- alkyl
- formula
- compound
- hydrogen
- methyl
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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- 238000000034 method Methods 0.000 title claims description 75
- 230000008569 process Effects 0.000 title claims description 60
- 238000004519 manufacturing process Methods 0.000 title description 4
- -1 -CH(CH)2 Chemical group 0.000 claims description 150
- 150000001875 compounds Chemical class 0.000 claims description 124
- 230000015572 biosynthetic process Effects 0.000 claims description 30
- 238000003786 synthesis reaction Methods 0.000 claims description 29
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 27
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 26
- 239000001257 hydrogen Substances 0.000 claims description 26
- 229910052739 hydrogen Inorganic materials 0.000 claims description 26
- 125000000623 heterocyclic group Chemical group 0.000 claims description 25
- 229910052736 halogen Inorganic materials 0.000 claims description 23
- 150000002367 halogens Chemical class 0.000 claims description 23
- 229910052757 nitrogen Inorganic materials 0.000 claims description 18
- 125000004433 nitrogen atom Chemical group N* 0.000 claims description 17
- 238000010511 deprotection reaction Methods 0.000 claims description 14
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 11
- 125000006570 (C5-C6) heteroaryl group Chemical group 0.000 claims description 8
- VLHQXRIIQSTJCQ-UHFFFAOYSA-N 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid Chemical compound OC(=O)C(C)N(C)C(=O)OC(C)(C)C VLHQXRIIQSTJCQ-UHFFFAOYSA-N 0.000 claims description 8
- CEBKHWWANWSNTI-UHFFFAOYSA-N 2-methylbut-3-yn-2-ol Chemical compound CC(C)(O)C#C CEBKHWWANWSNTI-UHFFFAOYSA-N 0.000 claims description 8
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 claims description 7
- RWRDLPDLKQPQOW-UHFFFAOYSA-N Pyrrolidine Chemical compound C1CCNC1 RWRDLPDLKQPQOW-UHFFFAOYSA-N 0.000 claims description 6
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 claims description 6
- CWMFRHBXRUITQE-UHFFFAOYSA-N trimethylsilylacetylene Chemical group C[Si](C)(C)C#C CWMFRHBXRUITQE-UHFFFAOYSA-N 0.000 claims description 5
- SETWFMYLBKUBKF-UHFFFAOYSA-N 5,6-dibromopyridin-2-amine Chemical compound NC1=CC=C(Br)C(Br)=N1 SETWFMYLBKUBKF-UHFFFAOYSA-N 0.000 claims description 4
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 claims description 4
- 230000008878 coupling Effects 0.000 claims description 4
- 238000010168 coupling process Methods 0.000 claims description 4
- 238000005859 coupling reaction Methods 0.000 claims description 4
- 150000003839 salts Chemical class 0.000 claims description 4
- VLHQXRIIQSTJCQ-ZCFIWIBFSA-N (2r)-2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid Chemical compound OC(=O)[C@@H](C)N(C)C(=O)OC(C)(C)C VLHQXRIIQSTJCQ-ZCFIWIBFSA-N 0.000 claims description 3
- HDECRAPHCDXMIJ-UHFFFAOYSA-N 2-methylbenzenesulfonyl chloride Chemical compound CC1=CC=CC=C1S(Cl)(=O)=O HDECRAPHCDXMIJ-UHFFFAOYSA-N 0.000 claims description 3
- CSKNSYBAZOQPLR-UHFFFAOYSA-N benzenesulfonyl chloride Chemical compound ClS(=O)(=O)C1=CC=CC=C1 CSKNSYBAZOQPLR-UHFFFAOYSA-N 0.000 claims description 3
- VLHQXRIIQSTJCQ-LURJTMIESA-N (2s)-2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid Chemical compound OC(=O)[C@H](C)N(C)C(=O)OC(C)(C)C VLHQXRIIQSTJCQ-LURJTMIESA-N 0.000 claims description 2
- ZSIQJIWKELUFRJ-UHFFFAOYSA-N azepane Chemical compound C1CCCNCC1 ZSIQJIWKELUFRJ-UHFFFAOYSA-N 0.000 claims description 2
- LMBFAGIMSUYTBN-MPZNNTNKSA-N teixobactin Chemical compound C([C@H](C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H](CCC(N)=O)C(=O)N[C@H]([C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H]1C(N[C@@H](C)C(=O)N[C@@H](C[C@@H]2NC(=N)NC2)C(=O)N[C@H](C(=O)O[C@H]1C)[C@@H](C)CC)=O)NC)C1=CC=CC=C1 LMBFAGIMSUYTBN-MPZNNTNKSA-N 0.000 claims description 2
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 60
- 239000000203 mixture Substances 0.000 description 37
- 125000004432 carbon atom Chemical group C* 0.000 description 34
- 238000006243 chemical reaction Methods 0.000 description 33
- KDLHZDBZIXYQEI-UHFFFAOYSA-N Palladium Chemical compound [Pd] KDLHZDBZIXYQEI-UHFFFAOYSA-N 0.000 description 26
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 25
- 238000002360 preparation method Methods 0.000 description 24
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 24
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 21
- 239000000543 intermediate Substances 0.000 description 21
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 20
- 150000001345 alkine derivatives Chemical group 0.000 description 19
- 125000003118 aryl group Chemical group 0.000 description 19
- 239000003446 ligand Substances 0.000 description 18
- 229920006395 saturated elastomer Polymers 0.000 description 18
- 239000002904 solvent Substances 0.000 description 18
- RIOQSEWOXXDEQQ-UHFFFAOYSA-N triphenylphosphine Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 RIOQSEWOXXDEQQ-UHFFFAOYSA-N 0.000 description 18
- 150000001649 bromium compounds Chemical class 0.000 description 17
- 125000004435 hydrogen atom Chemical group [H]* 0.000 description 17
- 125000001424 substituent group Chemical group 0.000 description 17
- 125000001072 heteroaryl group Chemical group 0.000 description 16
- 239000002585 base Substances 0.000 description 15
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 14
- 125000000392 cycloalkenyl group Chemical group 0.000 description 14
- 125000000753 cycloalkyl group Chemical group 0.000 description 14
- 239000000243 solution Substances 0.000 description 14
- JWUJQDFVADABEY-UHFFFAOYSA-N 2-methyltetrahydrofuran Chemical compound CC1CCCO1 JWUJQDFVADABEY-UHFFFAOYSA-N 0.000 description 13
- 125000000217 alkyl group Chemical group 0.000 description 13
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 12
- UAOMVDZJSHZZME-UHFFFAOYSA-N diisopropylamine Chemical compound CC(C)NC(C)C UAOMVDZJSHZZME-UHFFFAOYSA-N 0.000 description 12
- 229910052763 palladium Inorganic materials 0.000 description 12
- 239000011541 reaction mixture Substances 0.000 description 12
- 238000006467 substitution reaction Methods 0.000 description 12
- 0 *N(C=Nc(nc1C#Cc2cc(CCCCCCCC3)c3cc2)ccc1Br)*=I Chemical compound *N(C=Nc(nc1C#Cc2cc(CCCCCCCC3)c3cc2)ccc1Br)*=I 0.000 description 11
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 11
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 10
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 10
- XYFCBTPGUUZFHI-UHFFFAOYSA-N Phosphine Chemical compound P XYFCBTPGUUZFHI-UHFFFAOYSA-N 0.000 description 10
- 125000002947 alkylene group Chemical group 0.000 description 10
- 238000002425 crystallisation Methods 0.000 description 10
- 230000008025 crystallization Effects 0.000 description 10
- 125000001183 hydrocarbyl group Chemical group 0.000 description 10
- UAEPNZWRGJTJPN-UHFFFAOYSA-N methylcyclohexane Chemical compound CC1CCCCC1 UAEPNZWRGJTJPN-UHFFFAOYSA-N 0.000 description 10
- 239000000047 product Substances 0.000 description 10
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 9
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 9
- IMNFDUFMRHMDMM-UHFFFAOYSA-N N-Heptane Chemical compound CCCCCCC IMNFDUFMRHMDMM-UHFFFAOYSA-N 0.000 description 9
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 description 9
- 230000008901 benefit Effects 0.000 description 9
- 125000004122 cyclic group Chemical group 0.000 description 9
- 239000012074 organic phase Substances 0.000 description 9
- 238000000746 purification Methods 0.000 description 9
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 8
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 8
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 8
- 238000003477 Sonogashira cross-coupling reaction Methods 0.000 description 8
- 125000004429 atom Chemical group 0.000 description 8
- 229910052799 carbon Inorganic materials 0.000 description 8
- JUJWROOIHBZHMG-UHFFFAOYSA-N pyridine Substances C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 8
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 7
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 description 7
- 125000003342 alkenyl group Chemical group 0.000 description 7
- 125000004450 alkenylene group Chemical group 0.000 description 7
- 125000000304 alkynyl group Chemical group 0.000 description 7
- MXFYYFVVIIWKFE-UHFFFAOYSA-N dicyclohexyl-[2-[2,6-di(propan-2-yloxy)phenyl]phenyl]phosphane Chemical group CC(C)OC1=CC=CC(OC(C)C)=C1C1=CC=CC=C1P(C1CCCCC1)C1CCCCC1 MXFYYFVVIIWKFE-UHFFFAOYSA-N 0.000 description 7
- 125000005842 heteroatom Chemical group 0.000 description 7
- 239000008213 purified water Substances 0.000 description 7
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 6
- LQZMLBORDGWNPD-UHFFFAOYSA-N N-iodosuccinimide Chemical compound IN1C(=O)CCC1=O LQZMLBORDGWNPD-UHFFFAOYSA-N 0.000 description 6
- 125000004419 alkynylene group Chemical group 0.000 description 6
- 125000002619 bicyclic group Chemical group 0.000 description 6
- FJDQFPXHSGXQBY-UHFFFAOYSA-L caesium carbonate Chemical compound [Cs+].[Cs+].[O-]C([O-])=O FJDQFPXHSGXQBY-UHFFFAOYSA-L 0.000 description 6
- 238000004587 chromatography analysis Methods 0.000 description 6
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Chemical compound OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 description 6
- 238000001914 filtration Methods 0.000 description 6
- 125000001188 haloalkyl group Chemical group 0.000 description 6
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 6
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Chemical compound [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 description 6
- 238000003756 stirring Methods 0.000 description 6
- BZACBBRLMWHCNM-UHFFFAOYSA-N 2-methylimidazo[1,2-a]pyridine Chemical compound C1=CC=CC2=NC(C)=CN21 BZACBBRLMWHCNM-UHFFFAOYSA-N 0.000 description 5
- JAZYPFZGQWBPLI-UHFFFAOYSA-N 6-ethynylquinoline Chemical compound N1=CC=CC2=CC(C#C)=CC=C21 JAZYPFZGQWBPLI-UHFFFAOYSA-N 0.000 description 5
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 5
- MHXPWLYBZBQICF-UHFFFAOYSA-N N'-(5,6-dibromopyridin-2-yl)-N,N-dimethylmethanimidamide Chemical compound BrC=1C=CC(=NC=1Br)N=CN(C)C MHXPWLYBZBQICF-UHFFFAOYSA-N 0.000 description 5
- 125000000262 haloalkenyl group Chemical group 0.000 description 5
- 125000000232 haloalkynyl group Chemical group 0.000 description 5
- GYNNXHKOJHMOHS-UHFFFAOYSA-N methyl-cycloheptane Natural products CC1CCCCCC1 GYNNXHKOJHMOHS-UHFFFAOYSA-N 0.000 description 5
- DSWNRHCOGVRDOE-UHFFFAOYSA-N n,n-dimethylmethanimidamide Chemical group CN(C)C=N DSWNRHCOGVRDOE-UHFFFAOYSA-N 0.000 description 5
- YJVFFLUZDVXJQI-UHFFFAOYSA-L palladium(ii) acetate Chemical compound [Pd+2].CC([O-])=O.CC([O-])=O YJVFFLUZDVXJQI-UHFFFAOYSA-L 0.000 description 5
- 229910000073 phosphorus hydride Inorganic materials 0.000 description 5
- 125000006239 protecting group Chemical group 0.000 description 5
- 238000010992 reflux Methods 0.000 description 5
- PAQZWJGSJMLPMG-UHFFFAOYSA-N 2,4,6-tripropyl-1,3,5,2$l^{5},4$l^{5},6$l^{5}-trioxatriphosphinane 2,4,6-trioxide Chemical compound CCCP1(=O)OP(=O)(CCC)OP(=O)(CCC)O1 PAQZWJGSJMLPMG-UHFFFAOYSA-N 0.000 description 4
- OLFPZVLAQPKAIX-UHFFFAOYSA-N 2-methyl-4-(1-methylisoquinolin-6-yl)but-3-yn-2-ol Chemical compound CC(C)(C#CC=1C=C2C=CN=C(C2=CC=1)C)O OLFPZVLAQPKAIX-UHFFFAOYSA-N 0.000 description 4
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 4
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 4
- GHBMLTWWXUNGBX-UHFFFAOYSA-N COC1=NC=CC=C1C=1N=C2N(C=CC(=C2)C)C=1 Chemical compound COC1=NC=CC=C1C=1N=C2N(C=CC(=C2)C)C=1 GHBMLTWWXUNGBX-UHFFFAOYSA-N 0.000 description 4
- VMQMZMRVKUZKQL-UHFFFAOYSA-N Cu+ Chemical class [Cu+] VMQMZMRVKUZKQL-UHFFFAOYSA-N 0.000 description 4
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 4
- LRHPLDYGYMQRHN-UHFFFAOYSA-N N-Butanol Chemical compound CCCCO LRHPLDYGYMQRHN-UHFFFAOYSA-N 0.000 description 4
- SECXISVLQFMRJM-UHFFFAOYSA-N N-Methylpyrrolidone Chemical compound CN1CCCC1=O SECXISVLQFMRJM-UHFFFAOYSA-N 0.000 description 4
- 229910021529 ammonia Inorganic materials 0.000 description 4
- 235000011114 ammonium hydroxide Nutrition 0.000 description 4
- 125000000732 arylene group Chemical group 0.000 description 4
- YNHIGQDRGKUECZ-UHFFFAOYSA-L bis(triphenylphosphine)palladium(ii) dichloride Chemical compound [Cl-].[Cl-].[Pd+2].C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 YNHIGQDRGKUECZ-UHFFFAOYSA-L 0.000 description 4
- 150000001721 carbon Chemical group 0.000 description 4
- 239000007795 chemical reaction product Substances 0.000 description 4
- 238000006880 cross-coupling reaction Methods 0.000 description 4
- 125000005724 cycloalkenylene group Chemical group 0.000 description 4
- 125000002993 cycloalkylene group Chemical group 0.000 description 4
- 229940043279 diisopropylamine Drugs 0.000 description 4
- 150000002170 ethers Chemical class 0.000 description 4
- 235000019439 ethyl acetate Nutrition 0.000 description 4
- 125000005843 halogen group Chemical group 0.000 description 4
- 125000005549 heteroarylene group Chemical group 0.000 description 4
- UTCSSFWDNNEEBH-UHFFFAOYSA-N imidazo[1,2-a]pyridine Chemical group C1=CC=CC2=NC=CN21 UTCSSFWDNNEEBH-UHFFFAOYSA-N 0.000 description 4
- 150000005234 imidazo[1,2-a]pyridines Chemical class 0.000 description 4
- 125000002950 monocyclic group Chemical group 0.000 description 4
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 4
- 150000002940 palladium Chemical class 0.000 description 4
- NFHFRUOZVGFOOS-UHFFFAOYSA-N palladium;triphenylphosphane Chemical compound [Pd].C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 NFHFRUOZVGFOOS-UHFFFAOYSA-N 0.000 description 4
- 125000004665 trialkylsilyl group Chemical group 0.000 description 4
- LWIHDJKSTIGBAC-UHFFFAOYSA-K tripotassium phosphate Chemical compound [K+].[K+].[K+].[O-]P([O-])([O-])=O LWIHDJKSTIGBAC-UHFFFAOYSA-K 0.000 description 4
- UKSZBOKPHAQOMP-SVLSSHOZSA-N (1e,4e)-1,5-diphenylpenta-1,4-dien-3-one;palladium Chemical compound [Pd].C=1C=CC=CC=1\C=C\C(=O)\C=C\C1=CC=CC=C1.C=1C=CC=CC=1\C=C\C(=O)\C=C\C1=CC=CC=C1 UKSZBOKPHAQOMP-SVLSSHOZSA-N 0.000 description 3
- VHYFNPMBLIVWCW-UHFFFAOYSA-N 4-Dimethylaminopyridine Chemical compound CN(C)C1=CC=NC=C1 VHYFNPMBLIVWCW-UHFFFAOYSA-N 0.000 description 3
- 101100046775 Arabidopsis thaliana TPPA gene Proteins 0.000 description 3
- 239000005864 Sulphur Substances 0.000 description 3
- 230000002378 acidificating effect Effects 0.000 description 3
- 239000000654 additive Substances 0.000 description 3
- 150000001298 alcohols Chemical class 0.000 description 3
- 150000001412 amines Chemical class 0.000 description 3
- 239000000010 aprotic solvent Substances 0.000 description 3
- 239000007864 aqueous solution Substances 0.000 description 3
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 description 3
- HTJWUNNIRKDDIV-UHFFFAOYSA-N bis(1-adamantyl)-butylphosphane Chemical compound C1C(C2)CC(C3)CC2CC13P(CCCC)C1(C2)CC(C3)CC2CC3C1 HTJWUNNIRKDDIV-UHFFFAOYSA-N 0.000 description 3
- 229910000024 caesium carbonate Inorganic materials 0.000 description 3
- 239000003795 chemical substances by application Substances 0.000 description 3
- GBRBMTNGQBKBQE-UHFFFAOYSA-L copper;diiodide Chemical compound I[Cu]I GBRBMTNGQBKBQE-UHFFFAOYSA-L 0.000 description 3
- 239000013078 crystal Substances 0.000 description 3
- 238000004128 high performance liquid chromatography Methods 0.000 description 3
- 150000007529 inorganic bases Chemical class 0.000 description 3
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 3
- 238000006263 metalation reaction Methods 0.000 description 3
- 125000000325 methylidene group Chemical group [H]C([H])=* 0.000 description 3
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 3
- 238000010899 nucleation Methods 0.000 description 3
- 229910052760 oxygen Inorganic materials 0.000 description 3
- 239000001301 oxygen Substances 0.000 description 3
- UQPUONNXJVWHRM-UHFFFAOYSA-N palladium;triphenylphosphane Chemical compound [Pd].C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 UQPUONNXJVWHRM-UHFFFAOYSA-N 0.000 description 3
- 239000012071 phase Substances 0.000 description 3
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 3
- SCVFZCLFOSHCOH-UHFFFAOYSA-M potassium acetate Chemical compound [K+].CC([O-])=O SCVFZCLFOSHCOH-UHFFFAOYSA-M 0.000 description 3
- 229910000027 potassium carbonate Inorganic materials 0.000 description 3
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 3
- 125000004076 pyridyl group Chemical group 0.000 description 3
- 150000003254 radicals Chemical class 0.000 description 3
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 3
- 150000003459 sulfonic acid esters Chemical class 0.000 description 3
- 239000000725 suspension Substances 0.000 description 3
- XZZNDPSIHUTMOC-UHFFFAOYSA-N triphenyl phosphate Chemical compound C=1C=CC=CC=1OP(OC=1C=CC=CC=1)(=O)OC1=CC=CC=C1 XZZNDPSIHUTMOC-UHFFFAOYSA-N 0.000 description 3
- 238000010626 work up procedure Methods 0.000 description 3
- VNDYJBBGRKZCSX-UHFFFAOYSA-L zinc bromide Chemical compound Br[Zn]Br VNDYJBBGRKZCSX-UHFFFAOYSA-L 0.000 description 3
- JIAARYAFYJHUJI-UHFFFAOYSA-L zinc dichloride Chemical compound [Cl-].[Cl-].[Zn+2] JIAARYAFYJHUJI-UHFFFAOYSA-L 0.000 description 3
- 125000004973 1-butenyl group Chemical group C(=CCC)* 0.000 description 2
- 125000004972 1-butynyl group Chemical group [H]C([H])([H])C([H])([H])C#C* 0.000 description 2
- GQOGEHIVQIMJMO-UHFFFAOYSA-N 1-dipyrrolidin-1-ylphosphorylpyrrolidine Chemical compound C1CCCN1P(N1CCCC1)(=O)N1CCCC1 GQOGEHIVQIMJMO-UHFFFAOYSA-N 0.000 description 2
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- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Substances BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 description 1
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- 125000005569 butenylene group Chemical group 0.000 description 1
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- KZGWPHUWNWRTEP-UHFFFAOYSA-N ethynyl-tri(propan-2-yl)silane Chemical compound CC(C)[Si](C#C)(C(C)C)C(C)C KZGWPHUWNWRTEP-UHFFFAOYSA-N 0.000 description 1
- 238000001704 evaporation Methods 0.000 description 1
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- 125000003983 fluorenyl group Chemical group C1(=CC=CC=2C3=CC=CC=C3CC12)* 0.000 description 1
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- 125000003518 norbornenyl group Chemical group C12(C=CC(CC1)C2)* 0.000 description 1
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- 125000002524 organometallic group Chemical group 0.000 description 1
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- 238000007254 oxidation reaction Methods 0.000 description 1
- 125000000466 oxiranyl group Chemical group 0.000 description 1
- 125000006340 pentafluoro ethyl group Chemical group FC(F)(F)C(F)(F)* 0.000 description 1
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- 125000004592 phthalazinyl group Chemical group C1(=NN=CC2=CC=CC=C12)* 0.000 description 1
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- 239000003880 polar aprotic solvent Substances 0.000 description 1
- 239000002798 polar solvent Substances 0.000 description 1
- 125000003367 polycyclic group Chemical group 0.000 description 1
- 235000011056 potassium acetate Nutrition 0.000 description 1
- 229910000160 potassium phosphate Inorganic materials 0.000 description 1
- 235000011009 potassium phosphates Nutrition 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 125000006410 propenylene group Chemical group 0.000 description 1
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
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- 125000004805 propylene group Chemical group [H]C([H])([H])C([H])([*:1])C([H])([H])[*:2] 0.000 description 1
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- 239000003586 protic polar solvent Substances 0.000 description 1
- 125000001042 pteridinyl group Chemical group N1=C(N=CC2=NC=CN=C12)* 0.000 description 1
- 125000000561 purinyl group Chemical group N1=C(N=C2N=CNC2=C1)* 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- 125000003072 pyrazolidinyl group Chemical group 0.000 description 1
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- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- 125000002098 pyridazinyl group Chemical group 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
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- 238000004611 spectroscopical analysis Methods 0.000 description 1
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- LMUMMJCCZMWLEN-UHFFFAOYSA-N spiro[3.3]heptyl Chemical group [CH]1CCC11CCC1 LMUMMJCCZMWLEN-UHFFFAOYSA-N 0.000 description 1
- CCOIJUDZGUXWEH-UHFFFAOYSA-N spiro[4.5]dec-2-ene Chemical compound C1C=CCC11CCCCC1 CCOIJUDZGUXWEH-UHFFFAOYSA-N 0.000 description 1
- 239000012258 stirred mixture Substances 0.000 description 1
- 229940124530 sulfonamide Drugs 0.000 description 1
- 150000003456 sulfonamides Chemical class 0.000 description 1
- 125000001174 sulfone group Chemical group 0.000 description 1
- JYPOBIIXPKPZFU-UHFFFAOYSA-N tert-butyl N-methyl-N-[1-[[5-(2-methylimidazo[1,2-a]pyridin-3-yl)-6-(2-phenylethynyl)pyridin-2-yl]amino]-1-oxopropan-2-yl]carbamate Chemical compound CC(N(C)C(=O)OC(C)(C)C)C(=O)Nc1ccc(-c2c(C)nc3ccccn23)c(n1)C#Cc1ccccc1 JYPOBIIXPKPZFU-UHFFFAOYSA-N 0.000 description 1
- 150000003512 tertiary amines Chemical class 0.000 description 1
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 1
- WHRNULOCNSKMGB-UHFFFAOYSA-N tetrahydrofuran thf Chemical compound C1CCOC1.C1CCOC1 WHRNULOCNSKMGB-UHFFFAOYSA-N 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- 125000001712 tetrahydronaphthyl group Chemical group C1(CCCC2=CC=CC=C12)* 0.000 description 1
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- 125000004632 tetrahydrothiopyranyl group Chemical group S1C(CCCC1)* 0.000 description 1
- 125000005329 tetralinyl group Chemical group C1(CCCC2=CC=CC=C12)* 0.000 description 1
- 125000000383 tetramethylene group Chemical group [H]C([H])([*:1])C([H])([H])C([H])([H])C([H])([H])[*:2] 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical group OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 1
- 229940124597 therapeutic agent Drugs 0.000 description 1
- 125000001113 thiadiazolyl group Chemical group 0.000 description 1
- 125000001984 thiazolidinyl group Chemical group 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- 125000004568 thiomorpholinyl group Chemical group 0.000 description 1
- JOXIMZWYDAKGHI-UHFFFAOYSA-N toluene-4-sulfonic acid Chemical compound CC1=CC=C(S(O)(=O)=O)C=C1 JOXIMZWYDAKGHI-UHFFFAOYSA-N 0.000 description 1
- 125000004306 triazinyl group Chemical group 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- 125000006168 tricyclic group Chemical group 0.000 description 1
- 125000000025 triisopropylsilyl group Chemical group C(C)(C)[Si](C(C)C)(C(C)C)* 0.000 description 1
- 125000000026 trimethylsilyl group Chemical group [H]C([H])([H])[Si]([*])(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- HVLLSGMXQDNUAL-UHFFFAOYSA-N triphenyl phosphite Chemical compound C=1C=CC=CC=1OP(OC=1C=CC=CC=1)OC1=CC=CC=C1 HVLLSGMXQDNUAL-UHFFFAOYSA-N 0.000 description 1
- MHNHYTDAOYJUEZ-UHFFFAOYSA-N triphenylphosphane Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 MHNHYTDAOYJUEZ-UHFFFAOYSA-N 0.000 description 1
- 238000011144 upstream manufacturing Methods 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 239000002699 waste material Substances 0.000 description 1
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- 239000011701 zinc Substances 0.000 description 1
- 229910052725 zinc Inorganic materials 0.000 description 1
- 235000005074 zinc chloride Nutrition 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
- C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
- C07D471/04—Ortho-condensed systems
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D213/00—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
- C07D213/02—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
- C07D213/04—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
- C07D213/60—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D213/72—Nitrogen atoms
- C07D213/73—Unsubstituted amino or imino radicals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D213/00—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
- C07D213/02—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
- C07D213/04—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
- C07D213/60—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D213/72—Nitrogen atoms
- C07D213/74—Amino or imino radicals substituted by hydrocarbon or substituted hydrocarbon radicals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D215/00—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems
- C07D215/02—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom
- C07D215/04—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom with only hydrogen atoms or radicals containing only hydrogen and carbon atoms, directly attached to the ring carbon atoms
- C07D215/06—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom with only hydrogen atoms or radicals containing only hydrogen and carbon atoms, directly attached to the ring carbon atoms having only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, attached to the ring nitrogen atom
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D217/00—Heterocyclic compounds containing isoquinoline or hydrogenated isoquinoline ring systems
- C07D217/02—Heterocyclic compounds containing isoquinoline or hydrogenated isoquinoline ring systems with only hydrogen atoms or radicals containing only carbon and hydrogen atoms, directly attached to carbon atoms of the nitrogen-containing ring; Alkylene-bis-isoquinolines
- C07D217/04—Heterocyclic compounds containing isoquinoline or hydrogenated isoquinoline ring systems with only hydrogen atoms or radicals containing only carbon and hydrogen atoms, directly attached to carbon atoms of the nitrogen-containing ring; Alkylene-bis-isoquinolines with hydrocarbon or substituted hydrocarbon radicals attached to the ring nitrogen atom
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D217/00—Heterocyclic compounds containing isoquinoline or hydrogenated isoquinoline ring systems
- C07D217/22—Heterocyclic compounds containing isoquinoline or hydrogenated isoquinoline ring systems with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to carbon atoms of the nitrogen-containing ring
- C07D217/24—Oxygen atoms
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/06—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/10—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a carbon chain containing aromatic rings
Definitions
- the present invention relates to a process for the manufacture of 6-alkynyl-pyridine imidazopyridine derivatives and a pharmaceutically acceptable salt thereof More specifically, the process of the invention relates to a process for the synthesis of compounds of Formula I, II or III, wherein the groups R 1 to R 3 , R a and R b are defined herein below, and to new intermediates of this process.
- the application includes a description of novel intermediates, of new manufacturing steps resulting in a novel and improved process for producing the intermediates and the final compounds, i . e ., 6-alkynyl-pyridine derivatives.
- the intermediates of the invention are useful to produce 6-alkynyl-pyridine derivatives, which compounds are useful for the treatment of cancer.
- the process of the invention relates to the synthesis of the compounds of formula wherein
- the process of the invention relates to the synthesis of compounds of formula wherein
- the process of the invention relates to the synthesis of compounds of formula wherein
- 6-Alkynyl-pyridine derivatives and their salts are known from the following patent and patent applications: US 8,859,541 , WO 2013/127729 , WO 2016/023858 . These patent applications disclose the compounds, a process for their manufacture and the use of the compounds or their salts in a pharmaceutical composition to treat oncological or non-oncological diseases via inhibition of the proliferation of target cells, alone or in combination with further therapeutic agents.
- the mechanism of action by which the proliferation of the target cells occurs is essentially a protein-protein interaction, and especially a IAP-SMAC inhibition.
- the method of the prior art comprises a Sonogashira cross coupling reaction at the C-6 position of a pyridine ring between 5,6-dibromo-pyridin-2-yl-amine and a trialkylsilyl acetylene to give a Si(alkyl) 3 protected 6-alkynyl-pyridine.
- This is in turn acylated at the NH 2 moiety on C-2 using a 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid.
- an imidazo[1,2- a ]pyridine substituent (R x or R y Br) is installed at the C-5 position of the pyridine ring by a two-step sequence comprising a Miyaura borylation followed by a Suzuki cross coupling.
- R x or R y Br an imidazo[1,2- a ]pyridine substituent
- the synthetic route continues by removing the silicon protecting group on the alkyne moiety, which eventually allows to implement a second Sonogashira cross coupling to install the R 3 group before removing the N -Boc protecting group in order to complete the synthesis.
- the process described in the prior art has the following disadvantages: First of all, boronic acid derivatives are used. Furthermore, five of the intermediates bear the expensive trialkylsilyl group, and these intermediates can be purified only via chromatography.
- a first advantage of the process of the invention is that it is more convergent.
- the process of the prior art is based on a (seven) eight-step linear synthesis whereas the new synthesis is more convergent resulting in only six linear steps, thus improving the overall synthetic efficiency and throughput.
- a second advantage is that the improved process avoids the use of boronic acids intermediates (or their esters) and of the diboron compounds used for their preparation via Miyaura borylation. As also stated above, this class of compounds is known to pose a health risk associated with their handling. ( Org. Process Res. Dev. 2015, 19, 1507-1516 ). This can be avoided using the process of the invention.
- a third advantage is that the improved process makes use of a N , N -dimethylformamidine protecting group ( J. Org. Chem., 2008, 73 (22), 8954-8959 ) to mask the -NH 2 functionality on the pyridine core.
- This protecting group is very easy to install, surprisingly stable under the used reaction conditions and is easy to remove under a variety of conditions compatible with the presence of an alkyne moiety.
- the N , N- dimethylformamidine protecting group allows cross coupling reactions using basic organometallic reagents, such as organozinc compounds and proved to be essential for direct arylation procedure using imidazo[1,2- a ]pyridines as nucleophiles.
- a fourth advantage is that in the process of the invention the polyaromatic core is prepared upstream in the synthetic sequence using conditions which are amenable for the large scale production and are more friendly towards the environment than the processes already known from the prior art.
- the steps leading to pivotal intermediates III are conducted at high concentrations. This implies a reduction of volume-time output (VTO) which correlates inversely with the cost of plant occupancy and reduced solvent and waste costs.
- VTO volume-time output
- (poly)aromatic intermediates lacking the 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoyl and the lipophilic tri(propan-2-yl)silyl moieties like the intermediates A-M exemplified in the improved process are in general highly crystalline compounds and their purification can be mainly conducted via crystallization with obvious benefits over the column chromatography purification method which is necessary according to above-mentioned patent applications.
- a fifth advantage of the improved process is an extremely limited use of the labile trialkylsilyl protecting groups.
- a trimethylsilyl group is used as temporary protecting group only for the preparation of the intermediate E1.
- the trialkylsilyl protecting group is introduced at the very beginning and is maintained for most of the synthetic sequence.
- the use of expensive ethynyl-tri(propan-2-yl)silane is necessary to avoid undesired deprotection along the synthetic sequence.
- a sixth advantage is that while in the above-mentioned patent applications the expensive and sensitive 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino] propanoyl moiety is introduced at the very beginning of the synthetic sequence, in the improved process this is installed at the very end of the synthesis.
- the present inventors have accomplished the present invention by developing a novel method for the large scale preparation in high yield of 6-alkynyl-pyridine compounds and intermediates en route to their synthesis.
- the invention relates to a process for the synthesis of compounds of formula wherein
- the invention relates to a process for the synthesis of a compound of formula comprising the steps of
- the invention relates to a process for the synthesis of a compound of formula wherein
- a compound of formula is obtained by deprotection of a compound of formula wherein A is absent or is a 6-membered nitrogen containing heteroaryl optionally substituted with a -C 1-3 alkyl group.
- R x denotes H or -CH 3 .
- the trialkylsilylacetylene is trimethylsilylacetylene.
- the process for obtaining compounds of formula II or I comprises the steps of
- the process of the invention relates to compounds wherein R z is selected from -CH 3 , -CH 2 CH 3 , -CH(CH 3 ) 2 and R a and R b are the same or different selected from -CH 3 , -CH 2 CH 3 , -CH(CH) 2 , -C(CH 3 ) 3 , or -CH 2 -phenyl or R a and R b together form pyrrolidine, piperidine or hexahydro-1 H -azepine.
- R a and R b are both -CH 3 .
- the compounds of formula III can be further reacted with intermediates of formula J or K to obtain compounds of formula II.
- the compounds of formula III can be further reacted to obtain compounds of formula II and which can be further reacted to obtain compounds of formula I.
- the process for obtaining compounds of formula II or III further comprises the step of
- the process for obtaining compounds of formula II or III further comprises the step of coupling a compound of formula M with 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid, wherein the 2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid is racemic, S -2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid or R -2-[methyl-[(2-methylpropan-2-yl)oxycarbonyl]amino]propanoic acid, to form a compound of formula
- the process for obtaining compounds of formula II or III further comprises the step of deprotecting the compounds of formula N to give a compound of formula I.
- A is absent or is a 6-membered nitrogen containing heteroaryl, with one or two nitrogen atoms, preferably one, and optionally substituted with -CH 3 .
- R 3 is selected from -C 1-3 alkyl, preferably -CH 3 and a 6-membered nitrogen containing heteroaryl, preferably pyridyl, which pyridyl is optionally substituted with -CH 3 or -O-CH 3 , preferably -O-CH 3 .
- R 2 is selected from hydrogen or methyl.
- R 1 is selected from hydrogen or methyl.
- -C 1-5 alkyl means an alkyl group or radical having 1 to 5 carbon atoms.
- the first named sub-group is the radical attachment point, for example the substitutent -C 1-5 alkyl-C 3-10 cylcoalkyl, means a C 3-10 cycloalkyl group which is bound to a C 1-5 alkyl, the latter of which is bound to the core structure or to the group to which the substitutent is attached.
- the indication of the number of members in groups that contain one or more heteroatom(s) (heteroalkyl, heteroaryl, heteroarylalkyl, heterocyclyl, heterocycylalkyl) relates to the total atomic number of all the ring members or chain members or the total of all the ring and chain members.
- substituent groups containing a nitrogen atom can also be indicated as amine or amino.
- groups containing oxygen atom can also be indicated with -oxy, like for example alkoxy.
- Groups containing -C(O)- can also be indicated as carboxy; groups containing -NC(O)- can also be indicated as amide; groups containing -NC(O)N- can also be indicated as urea; groups containing -NS(O) 2 - can also be indicated as sulfonamide.
- Alkyl denotes monovalent, saturated hydrocarbon chains, which may be present in both linear and branched form. If an alkyl is substituted, the substitution may take place independently of one another, by mono- or polysubstitution in each case, on all the hydrogen-carrying carbon atoms.
- C 1-5 -alkyl includes for example methyl (Me; -CH 3 ), ethyl (Et; -CH 2 CH 3 ), 1-propyl ( n -propyl; n -Pr; -CH 2 CH 2 CH 3 ), 2-propyl ( i -Pr; iso -propyl; -CH(CH 3 ) 2 ), 1-butyl ( n -butyl; n -Bu; -CH 2 CH 2 CH 2 CH 3 ), 2-methyl-1-propyl ( iso -butyl; i -Bu; -CH 2 CH(CH 3 ) 2 ), 2-butyl ( sec -butyl; sec -Bu; -CH(CH 3 )CH 2 CH 3 ), 2-methyl-2-propyl ( tert -butyl; t -Bu; -C(CH 3 ) 3 ), 1-pentyl ( n -pentyl; -CH 2
- propyl, butyl, pentyl, etc. without any further definition are meant saturated hydrocarbon groups with the corresponding number of carbon atoms, wherein all isomeric forms are included.
- alkyl also applies if alkyl is a part of another group such as for example C x-y -alkyl amino or C x-y -alkyl oxy or C x-y -alk oxy, wherein C x-y -alkyl oxy and C x-y -alk oxy indicate the same group.
- alkylene can also be derived from alkyl.
- Alkylene is bivalent, unlike alkyl, and requires two binding partners. Formally, the second valency is produced by removing a hydrogen atom in an alkyl.
- Corresponding groups are for example -CH 3 and -CH 2 , -CH 2 CH 3 and -CH 2 CH 2 or >CHCH 3 etc.
- C 1-4 -alkylene includes for example -(CH 2 )-, -(CH 2 -CH 2 )-, -(CH(CH 3 )) - , -(CH 2 -CH 2 -CH 2 ) - , -(C(CH 3 ) 2 ) - , -(CH(CH 2 CH 3 )) - , -(CH(CH 3 )-CH 2 )-, -(CH(CH 3 )-CH 2 )-, -(CH 2 -CH(CH 3 )) - , -(CH 2 -CH 2 -CH 2 -CH 2 ) - , -(CH 2 -CH 2 -CH(CH 3 )) - , -(CH(CH 3 )-CH 2 -CH 2 )-, -(CH 2 -CH(CH 3 )-CH 2 -CH 2 )-, -(CH 2 -CH(CH 3 )-CH 2
- alkylene examples include methylene, ethylene, propylene, 1-methylethylene, butylene, 1-methylpropylene, 1.1-dimethylethylene, 1,2-dimethylethylene, pentylene, 1,1-dimethylpropylene, 2,2-dimethylpropylene, 1,2-dimethylpropylene, 1,3-dimethylpropylene, etc.
- propylene includes 1-methylethylene and butylene includes 1-methylpropylene, 2-methylpropylene, 1,1-dimethylethylene and 1,2-dimethylethylene.
- alkylene also applies if alkylene is part of another group such as for example in HO-C x-y -alkylen amino or H 2 N-C x-y -alkylen oxy.
- alkenyl consists of at least two carbon atoms, wherein at least two adjacent carbon atoms are joined together by a C-C double bond. If in an alkyl as hereinbefore defined having at least two carbon atoms, two hydrogen atoms on adjacent carbon atoms are formally removed and the free valencies are saturated to form a second bond, the corresponding alkenyl is formed.
- alkenyl examples include vinyl (ethenyl), prop-1-enyl, allyl (prop-2-enyl), isopropenyl, but-1-enyl, but-2-enyl, but-3-enyl, 2-methyl-prop-2-enyl, 2-methyl-prop-1-enyl, 1-methyl-prop-2-enyl, 1-methyl-prop-1-enyl, 1-methylidenepropyl, pent-1-enyl, pent-2-enyl, pent-3-enyl, pent-4-enyl, 3-methyl-but-3-enyl, 3-methyl-but-2-enyl, 3-methyl-but-1-enyl, hex-1-enyl, hex-2-enyl, hex-3-enyl, hex-4-enyl, hex-5-enyl, 2,3-dimethyl-but-3-enyl, 2,3-dimethyl-but-2-enyl, 2-methylidene-3-methylbuty
- propenyl includes prop-1-enyl and prop-2-enyl
- butenyl includes but-1-enyl, but-2-enyl, but-3-enyl, 1-methyl-prop-1-enyl, 1-methyl-prop-2-enyl etc.
- Alkenyl may optionally be present in the cis or trans or E or Z orientation with regard to the double bond(s).
- alkenyl also applies when alkenyl is part of another group such as for example in C x-y -alkenyl amino or C x-y -alkenyl oxy.
- alkenylene consists of at least two carbon atoms, wherein at least two adjacent carbon atoms are joined together by a C-C double bond. If in an alkylene as hereinbefore defined having at least two carbon atoms, two hydrogen atoms at adjacent carbon atoms are formally removed and the free valencies are saturated to form a second bond, the corresponding alkenylene is formed.
- alkenylene examples include ethenylene, propenylene, 1-methylethenylene, butenylene, 1-methylpropenylene, 1,1-dimethylethenylene, 1,2-dimethylethenylene, pentenylene, 1,1-dimethylpropenylene, 2,2-dimethylpropenylene, 1,2-dimethylpropenylene, 1,3-dimethylpropenylene, hexenylene etc.
- propenylene includes 1-methylethenylene and butenylene includes 1-methylpropenylene, 2-methylpropenylene, 1,1-dimethylethenylene and 1,2-dimethylethenylene.
- Alkenylene may optionally be present in the cis or trans or E or Z orientation with regard to the double bond(s).
- alkenylene also applies when alkenylene is a part of another group as in for example HO-C x-y -alkenylen amino or H 2 N-C x-y -alkenylen oxy.
- alkynyl consists of at least two carbon atoms, wherein at least two adjacent carbon atoms are joined together by a C-C triple bond. If in an alkyl as hereinbefore defined having at least two carbon atoms, two hydrogen atoms in each case at adjacent carbon atoms are formally removed and the free valencies are saturated to form two further bonds, the corresponding alkynyl is formed.
- alkynyl examples include ethynyl, prop-1-ynyl, prop-2-ynyl, but-1-ynyl, but-2-ynyl, but-3-ynyl, 1-methyl-prop-2-ynyl, pent-1-ynyl, pent-2-ynyl, pent-3-ynyl, pent-4-ynyl, 3-methyl-but-1-ynyl.
- propynyl includes prop-1-ynyl and prop-2-ynyl
- butynyl includes but-1-ynyl, but-2-ynyl, but-3-ynyl, 1-methyl-prop-1-ynyl, 1-methyl-prop-2-ynyl.
- hydrocarbon chain carries both at least one double bond and also at least one triple bond, by definition it belongs to the alkynyl subgroup.
- alkynyl also applies if alkynyl is part of another group, as in C x-y -alkynyl amino or C x-y -alkynyl oxy, for example.
- alkynylene consists of at least two carbon atoms, wherein at least two adjacent carbon atoms are joined together by a C-C triple bond. If in an alkylene as hereinbefore defined having at least two carbon atoms, two hydrogen atoms in each case at adjacent carbon atoms are formally removed and the free valencies are saturated to form two further bonds, the corresponding alkynylene is formed.
- alkynylene examples include ethynylene, propynylene, 1-methylethynylene, butynylene, 1-methylpropynylene, 1,1-dimethylethynylene, 1,2-dimethylethynylene, pentynylene, 1,1-dimethylpropynylene, 2,2-dimethylpropynylene, 1,2-dimethylpropynylene, 1,3-dimethylpropynylene, hexynylene etc.
- propynylene includes 1-methylethynylene and butynylene includes 1-methylpropynylene, 2-methylpropynylene, 1,1-dimethylethynylene and 1,2-dimethylethynylene.
- alkynylene also applies if alkynylene is part of another group, as in HO-C x-y -alkynylene amino or H 2 N-C x-y -alkynylene oxy, for example.
- heteroatoms oxygen, nitrogen and sulphur atoms.
- Haloalkyl (haloalkenyl, haloalkynyl) is derived from the previously defined alkyl (alkenyl, alkynyl) by replacing one or more hydrogen atoms of the hydrocarbon chain independently of one another by halogen atoms, which may be identical or different. If a haloalkyl (haloalkenyl, haloalkynyl) is to be further substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon atoms.
- haloalkyl haloalkenyl, haloalkynyl
- haloalkyl haloalkenyl, haloalkynyl
- -CCl CH 2
- -CBr CH 2
- -CI CH 2 , -C ⁇ C-CF 3 , -CHFCH 2 CH 3 , -CHFCH 2 CF 3 etc.
- haloalkyl haloalkenyl, haloalkynyl
- haloalkylene haloalkenylene, haloalkynylene
- Haloalkylene haloalkenyl, haloalkynyl
- the second valency is formed by removing a hydrogen atom from a haloalkyl.
- Corresponding groups are for example -CH 2 F and -CHF-, -CHFCH 2 F and -CHFCHF- or >CFCH 2 F etc.
- Halogen relates to fluorine, chlorine, bromine and/or iodine atoms.
- Cycloalkyl is made up of the subgroups monocyclic hydrocarbon rings, bicyclic hydrocarbon rings and spiro-hydrocarbon rings. The systems are saturated. In bicyclic hydrocarbon rings two rings are joined together so that they have at least two carbon atoms together. In spiro-hydrocarbon rings a carbon atom (spiroatom) belongs to two rings together. If a cycloalkyl is to be substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon atoms. Cycloalkyl itself may be linked as a substituent to the molecule via every suitable position of the ring system.
- cycloalkyl examples include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, bicyclo[2.2.0]hexyl, bicyclo[3.2.0]heptyl, bicyclo[3.2.1]octyl, bicyclo[2.2.2]octyl, bicyclo[4.3.0]nonyl (octahydroindenyl), bicyclo[4.4.0]decyl (decahydronaphthalene), bicyclo[2.2.1]heptyl (norbornyl), bicyclo[4.1.0]heptyl (norcaranyl), bicyclo-[3.1.1]heptyl (pinanyl), spiro[2.5]octyl, spiro[3.3]heptyl etc.
- cycloalkyl also applies if cycloalkyl is part of another group as in C x-y -cycloalkyl amino or C x-y -cycloalkyl oxy, for example.
- cycloalkylene can thus be derived from the previously defined cycloalkyl.
- Cycloalkylene unlike cycloalkyl, is bivalent and requires two binding partners.
- the second valency is obtained by removing a hydrogen atom from a cycloalkyl.
- Corresponding groups are for example cyclohexyl and (cyclohexylene).
- the above definition for cycloalkylene also applies if cycloalkylene is part of another group as in HO-C x-y -cycloalkylene amino or H 2 N-C x-y -cycloalkylene oxy, for example.
- Cycloalkenyl is also made up of the subgroups monocyclic hydrocarbon rings, bicyclic hydrocarbon rings and spiro-hydrocarbon rings. However, the systems are unsaturated, i.e. there is at least one C-C double bond but no aromatic system. If in a cycloalkyl as hereinbefore defined two hydrogen atoms at adjacent cyclic carbon atoms are formally removed and the free valencies are saturated to form a second bond, the corresponding cycloalkenyl is obtained. If a cycloalkenyl is to be substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon atoms. Cycloalkenyl itself may be linked as a substituent to the molecule via every suitable position of the ring system.
- cycloalkenyl examples include cycloprop-1-enyl, cycloprop-2-enyl, cyclobut-1-enyl, cyclobut-2-enyl, cyclopent-1-enyl, cyclopent-2-enyl, cyclopent-3-enyl, cyclohex-1-enyl, cyclohex-2-enyl, cyclohex-3-enyl, cyclohept-1-enyl, cyclohept-2-enyl, cyclohept-3-enyl, cyclohept-4-enyl, cyclobuta-1,3-dienyl, cyclopenta-1,4-dienyl, cyclopenta-1,3-dienyl, cyclopenta-2,4-dienyl, cyclohexa-1,3-dienyl, cyclohexa-1,5-dienyl, cyclohexa-2,4-dien
- cycloalkenylene can thus be derived from the previously defined cycloalkenyl.
- Cycloalkenylene unlike cycloalkenyl, is bivalent and requires two binding partners. Formally the second valency is obtained by removing a hydrogen atom from a cycloalkenyl.
- Corresponding groups are for example cyclopentenyl and (cyclopentenylene) etc.
- cycloalkenylene also applies when cycloalkenylene is part of another group as in HO-C x-y -cycloalkenylene amino or H 2 N-C x-y -cycloalkenylene oxy, for example.
- Aryl denotes a mono-, bi- or tricyclic group with at least one aromatic carbocycle. Preferably it denotes a a monocyclic group with six carbon atoms (phenyl) or a bicyclic group with nine or ten carbon atoms (two six-membered rings or one six-membered ring with a five-membered ring), wherein the second ring may also be aromatic or, however, may also be saturated or partially saturated. If an aryl is to be substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon atoms.
- Aryl itself may be linked as a substituent to the molecule via every suitable position of the ring system.
- aryl examples include phenyl, naphthyl, indanyl (2,3-dihydroindenyl), indenyl, anthracenyl, phenanthrenyl, tetrahydronaphthyl (1,2,3,4-tetrahydronaphthyl, tetralinyl), dihydronaphthyl (1,2- dihydronaphthyl), fluorenyl etc.
- aryl also applies when aryl is part of another group as in aryl amino or aryl oxy, for example.
- arylene can also be derived from the previously defined aryl.
- Arylene unlike aryl, is bivalent and requires two binding partners. Formally, the second valency is formed by removing a hydrogen atom from an aryl.
- Corresponding groups are e.g. phenyl and ( o, m , p -phenylene), naphthyl and
- arylene also applies when arylene is part of another group as in HO- arylene amino or H 2 N -arylene oxy for example.
- heterocyclyl is made up of the subgroups monocyclic heterorings, bicyclic heterorings, tricyclic heterorings and spiro-heterorings, which may be present in saturated or unsaturated form.
- Saturated and unsaturated, non aromatic, heterocyclyl are also defined as heterocycloalkyl.
- unsaturated is meant that there is at least one double bond in the ring system in question, but no heteroaromatic system is formed.
- bicyclic heterorings two rings are linked together so that they have at least two (hetero)atoms in common.
- a carbon atom belongs to two rings together. If a heterocyclyl is substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon and/or nitrogen atoms. Heterocyclyl itself may be linked as a substituent to the molecule via every suitable position of the ring system. When the heterocyclyl has a nitrogen atom, the preferred position to bind the heterocyclyl substituent to the molecule is the nitrogen atom.
- heterocyclyl examples include tetrahydrofuryl, pyrrolidinyl, pyrrolinyl, imidazolidinyl, thiazolidinyl, imidazolinyl, pyrazolidinyl, pyrazolinyl, piperidinyl, piperazinyl, oxiranyl, aziridinyl, azetidinyl, 1,4-dioxanyl, azepanyl, diazepanyl, morpholinyl, thiomorpholinyl, homomorpholinyl, homopiperidinyl, homopiperazinyl, homothiomorpholinyl, thiomorpholinyl- S -oxide, thiomorpholinyl- S , S -dioxide, 1,3-dioxolanyl, tetrahydropyranyl, tetrahydrothiopyranyl, [1.4]-oxazepanyl, tetrahydro
- heterocyclyl also applies if heterocyclyl is part of another group as in heterocyclyl amino or heterocyclyl oxy for example.
- heterocyclylene is also derived from the previously defined heterocyclyl.
- Heterocyclylene unlike heterocyclyl, is bivalent and requires two binding partners. Formally, the second valency is obtained by removing a hydrogen atom from a heterocyclyl.
- Corresponding groups are for example piperidinyl and 2,3-dihydro-1 H -pyrrolyl and etc.
- heterocyclylene also applies if heterocyclylene is part of another group as in HO- heterocyclylene amino or H 2 N -heterocyclylene oxy for example.
- Heteroaryl denotes monocyclic heteroaromatic rings or polycyclic rings with at least one heteroaromatic ring, which compared with the corresponding aryl or cycloalkyl (cycloalkenyl) contain, instead of one or more carbon atoms, one or more identical or different heteroatoms, selected independently of one another from among nitrogen, sulphur and oxygen, wherein the resulting group must be chemically stable.
- the prerequisite for the presence of heteroaryl is a heteroatom and a heteroaromatic system. If a heteroaryl is to be substituted, the substitutions may take place independently of one another, in the form of mono- or polysubstitutions in each case, on all the hydrogen-carrying carbon and/or nitrogen atoms.
- Heteroaryl itself may be linked as a substituent to the molecule via every suitable position of the ring system, both carbon and nitrogen.
- heteroaryl are furyl, thienyl, pyrrolyl, oxazolyl, thiazolyl, isoxazolyl, isothiazolyl, pyrazolyl, imidazolyl, triazolyl, tetrazolyl, oxadiazolyl, thiadiazolyl, pyridyl, pyrimidyl, pyridazinyl, pyrazinyl, triazinyl, pyridyl- N -oxide, pyrrolyl- N -oxide, pyrimidinyl- N -oxide, pyridazinyl- N -oxide, pyrazinyl- N -oxide, imidazolyl- N -oxide, isoxazolyl- N -oxide, oxazolyl
- heteroaryl also applies when heteroaryl is part of another group as in heteroarylamino or heteroaryloxy, for example.
- heteroarylene can therefore be derived from the previously defined heteroaryl.
- Heteroarylene unlike heteroaryl, is bivalent and requires two binding partners. Formally, the second valency is obtained by removing a hydrogen atom from a heteroaryl.
- Corresponding groups are for example pyrrolyl and etc.
- heteroarylene also applies when heteroarylene is part of another group as in HO- heteroarylene amino or H 2 N -heteroarylene oxy, for example.
- the bivalent groups mentioned above (alkylene, alkenylene, alkynylene etc.) may also be part of composite groups (e.g. H 2 N-C 1-4 alkylene- or HO-C 1-4 alkylene-). In this case one of the valencies is saturated by the attached group (here: -NH 2 , -OH), so that a composite group of this kind written in this way is only a monovalent substituent over all.
- substituted By substituted is meant that a hydrogen atom which is bound directly to the atom under consideration, is replaced by another atom or another group of atoms (substituent). Depending on the starting conditions (number of hydrogen atoms) mono- or polysubstitution may take place on one atom. Substitution with a particular substituent is only possible if the permitted valencies of the substituent and of the atom that is to be substituted correspond to one another and the substitution leads to a stable compound ( i.e. to a compound which is not converted spontaneously, e.g. by rearrangement, cyclisation or elimination).
- substitution may be carried out by a bivalent substituent only at ring systems and requires replacement by two geminal hydrogen atoms, i . e . hydrogen atoms that are bound to the same carbon atom that is saturated prior to the substitution. Substitution by a bivalent substituent is therefore only possible at the group -CH 2 - or sulphur atoms of a ring system.
- the process of the invention comprises the steps of reacting an alkyne of the type E via a Sonogashira cross coupling.
- the reaction of alkynes of the type E with the amidine B is carried out in the presence of a palladium source, a copper(I) salt, a base and optionally of ( L )-ascorbic acid and of a ligand.
- the palladium source is a stable palladium complex such as bis(triphenylphosphinepalladium)dichloride.
- Preferred ligand is a phosphine ligand such as triphenylphosphine.
- copper(I) salt is preferably used copper iodide and the preferred base is an amine such as diisopropylamine, diisopropylethylamine or triethylamine.
- the reaction can be carried out in alcohols, acetonitrile, ethers or toluene, preferably in toluene, at temperatures of 20-100 °C, preferably at 50-70 °C.
- the reaction products III are isolated per crystallization or chromatography.
- the compounds according to the invention are prepared by the methods of synthesis
- the process for the synthesis of compounds of formula I, II or III comprises the following steps for the synthesis of compounds of formula E.
- a compound of formula is obtained by deprotection of a compound of formula wherein A is absent or is a 6-membered nitrogen containing heteroaryl optionally substituted with a -C 1-3 alkyl group.
- deprotection is obtained in basic conditions.
- the deprotection of alkyne H to give E is carried out in the presence of a base such as NaH, KOH or K 3 PO 4 or combinations thereof in an organic solvent such as toluene, xylene, 2-methyltetrahydrofuran or tetrahydrofuran at 40 °C to 100 °C. More preferably the reaction is carried out in toluene at 55 °C.
- the product isolation is carried out as described below or used directly in solution in the next step.
- 6-ethynyl-derivatives E may be synthesized in accordance with the processes shown in the synthesis Scheme III.
- the 6-ethynyl-quinoline E1 is obtained by a two-step procedure consisting of an Sonogashira cross coupling with ethynyltrimethylsilane, followed by desilylation.
- Alkynes of the type H are obtained by the two-step procedure shown in the synthesis Scheme III.
- a Sonogashira cross coupling with 2-methyl-3-butyn-2-ol leads to H.
- the sulfonic acid ester G is preferably prepared by reaction of the corresponding phenol F with toluenesulfonic acid chloride or benzensulfonic acid chloride in the presence of a base, preferably a tertiary amine base, preferably triethylamine and diisopropylethylamine.
- the reaction is preferably carried out in an aprotic solvent such as dichloromethane, DMF, THF, acetonitrile or acetone at a temperature of 20-100 °C. More preferably the reaction is carried out in acetone at a temperature of 50-60 °C.
- the product G can be isolated by crystallization or chromatography.
- the reaction of the sulfonic acid ester with 2-methyl-3-butyn-2-ol is carried out in the presence of a palladium source, a ligand and a base.
- a palladium source is used preferably a stable palladium salt such as palladium acetate.
- ligand is preferably used a phosphine ligand such as 2-dicyclohexylphosphino-2',6'-diisopropoxy-1,1'-biphenyl ("RuPhos").
- a carbonate base such as potassium carbonate is preferably used as the base.
- the reaction can be carried out in alcohols, acetonitrile, ethers, toluene or water or mixtures of these at 40 °C to 100 °C. More preferably the reaction is carried out in 2-propanol/water mixtures at 75 °C to 85 °C. Subsequently, the solvent is replaced by a nonpolar solvent, preferably toluene, and the inorganic compounds are removed by aqueous washes.
- the alkynes H can be isolated by crystallization or directly used in solution in the subsequent reaction step after an extractive work up and concentration of the organic extracts.
- the deprotection reaction to give alkynes E occurs by treatment of alkynes H with a base.
- a base such as an alkali hydroxide, carbonate or phosphate is employed and more preferably a mixture of potassium hydroxide and potassium phosphate is utilized.
- the reaction is carried out in aprotic solvents such as toluene, THF, or acetonitrile, preferably toluene at temperatures of 25-120 °C, preferably 90-110 °C.
- aprotic solvents such as toluene, THF, or acetonitrile, preferably toluene at temperatures of 25-120 °C, preferably 90-110 °C.
- inorganic compounds are removed by filtration or aqueous work up and the organic phase is then used directly in the next reaction step.
- alkynes of the type H may be prepared from (heterocyclic) bromides of the type D as shown in the synthesis Scheme II.
- reaction of bromides D with 2-methyl-3-butyn-2-ol is carried out in the presence of a palladium source, a ligand, a copper(I) salt and a base.
- a palladium source is used preferably a stable palladium salt such as bis(triphenylphosphine)palladium dichloride.
- Preferred ligand is a phosphine ligand such as triphenylphosphine.
- copper(I) salt is preferably used copper iodide and the preferred base is an amine such as triethylamine, diisopropylamine, diisopropylethylamine.
- the reaction can be carried out in alcohols, acetonitrile, ethers, toluene or water or mixtures of these at 40 °C to 100 °C. More preferably the reaction is carried out in 2-methyltetrahydrofuran at 80 °C.
- the product isolation is carried out as described above or crystallized from an appropriate solvent such as iPrOAc.
- halogenoimidazopyridines K are obtained from pyridinium salts of the type C by a cyclization to imidazo[1,2- a ]pyridines J followed by a halogenation step as shown in synthesis Scheme IV.
- the cyclization may be mediated by an appropriate base such as a strong inorganic base, preferably sodium hydroxide, and is carried out in a protic or aprotic solvent such as acetonitrile, methanol and THF, preferably in methanol.
- a protic or aprotic solvent such as acetonitrile, methanol and THF, preferably in methanol.
- the reaction is maintained at a temperature of about 5 °C to 60 °C and preferably at 15 °C to 35 °C.
- the halogenation agent e.g. N -iodosuccinimide
- the reaction products K are isolated per crystallization or chromatography.
- 6-Bromo-1-chloro-isoquinoline (60.0 g, 0.24 mol) is combined with Me-THF (270 mL) and tetramethylethylendiamine (18.7 mL, 0.12 mol) is added, rinsing with Me-THF (5 mL).
- Iron(III)acetylacetonate (437 mg, 1.24 mmol) is added, rinsing with Me-THF (5 mL).
- the resulting mixture is cooled to 0 °C and methyl magnesium chloride, 3.0 M in THF (86.6 mL, 0.26 mol) is added at 0-2 °C in 1 h, rinsing with Me-THF (20 mL).
- E2 and E3 can be prepared under analogous conditions (analogous conditions include potential deviations from the disclosed conditions in terms of, e.g., solvent, reaction conditions or purification which the skilled artisan is familiar with and takes into account):
- analogous conditions include potential deviations from the disclosed conditions in terms of, e.g., solvent, reaction conditions or purification which the skilled artisan is familiar with and takes into account):
- E1 MS (ESI + ) m/z 154 [M+H] +
- E2 MS (ESI + ) m/z 168 [M+H] +
- E3 MS (ESI + ) m/z 168 [M+H] +
- the 1-methyl-isoquinolin-6-ol may be synthesized following literature procedures ( Journal of Organic Chemistry USSR, English Translation, 1992, 28, 642-646 ).
- alkyne E3 may be isolated before performing the Sonogashira reaction.
- MS (ESI + ) m/z 168 [M+H] + .
- the intermediates III can be further functionalized by performing cross coupling reactions at the 5-position bearing the halogen atom with the appropriate imidazo[1,2- a ]pyridine as shown in the synthesis Scheme V.
- 2-Amino-1-(prop-2-yn-1-yl)pyridin-1-ium bromide C1 (150.0 g, 0.66 mol) is suspended in methanol (600 mL) and 4 N sodium hydroxide aq. solution (530.0 mL, 2.12 mol) is added in 30 min at 15-35 °C. After stirring for 2 h at 20 °C, N -iodosuccinimide (175.0 g, 0.78 mol) is added in portions to the resulting solution of 2-methylimidazo[1,2- a ]pyridine J1 at 21-24 °C.
- the 3-halogeno-imidazo[1,2- a ]pyridines K can be metallated and subsequently cross coupled with III in the presence of a palladium source, a ligand and optionally of other additives.
- the halogen atom is preferably iodine.
- the metallation step can be carried out with an appropriate metallating agent such as isopropylmagnesium chloride or isopropylmagnesium chloride lithium chloride complex solutions followed by a treatment with a transmetallating agent such as ZnBr 2 or ZnCl 2 .
- the metallation/transmetallation sequence reaction is preferably carried out in ethers (e.g. Me-THF or THF) or in polar aprotic solvents ( e.g .
- the solution of the metallated imidazo[1,2- a ]pyridine is then combined with a solution of III and cross coupled in the presence of a palladium catalyst and a ligand.
- palladium source preferably a stable palladium salt or complex such as bis(dibenzylideneacetone)palladium, tri(dibenzylideneacetone)dipalladium, Pd(OAc) 2 , Pd(OPiv) 2 , tetrakis(triphenylphosphine)palladium, bis(triphenylphosphinepalladium)-dichloride, Preferably bis(dibenzylideneacetone)palladium.
- a stable palladium salt or complex such as bis(dibenzylideneacetone)palladium, tri(dibenzylideneacetone)dipalladium, Pd(OAc) 2 , Pd(OPiv) 2 , tetrakis(triphenylphosphine)palladium, bis(triphenylphosphinepalladium)-dichloride, Preferably bis(dibenzylideneacetone)palladium.
- a phosphine ligand such as triphenylphosphine, t BuXPhos, BrettPhos, RuPhos, SPhos, di(1-adamantyl)- n -butylphosphine.
- Preferred ligand is RuPhos.
- the cross coupling step is carried out at a temperature of 20-80 °C and preferably at 40-65 °C.
- the reaction products II can be thus isolated or the N , N -dimethylformamidine moiety can be cleaved during the acidic aqueous work up to produce the aminopyridines M which are isolated per crystallization or chromatography.
- N , N- dimethylformamidine protecting group in compounds II can be removed using basic conditions which are even more compatible with the presence of an alkyne moiety, such as sodium hydroxide, ammonium hydroxide or ethylenediamine ( J. Org. Chem., 2008, 73 (22), 8954-8959 ).
- the imidazo[1,2- a ]pyridines J can be cross coupled with III in the presence of a palladium source, a ligand, a base and optionally of other additives.
- a palladium source is used preferably a stable palladium salt or complex such as Pd(OAc) 2 , Pd(OPiv) 2 , PdCl 2 [( t -Bu) 2 PCl] 2 , tetrakis(triphenylphosphine)palladium, bis(triphenylphosphinepalladium) dichloride.
- a phosphine ligand such as triphenylphosphine, (4-CF 3 -C 6 H 4 ) 3 P, (4-F-C 6 H 4 ) 3 P, (4-MeOC 6 H 4 ) 3 P, (2-MeC 6 H 4 ) 3 P, cHex 3 P, t BuXPhos, BrettPhos, RuPhos, (PhO) 3 P, di(1-adamantyl)- n- butylphosphine.
- Preferred ligand are triphenylphosphine or di(1-adamantyl)- n- butylphosphine.
- an appropriate base such as an inorganic base such as Cs 2 CO 3 , K 2 CO 3 or (NH 4 ) 2 CO 3 , and preferably Cs 2 CO 3 .
- pivalic acid isobutyric acid or m NO 2 C 6 H 4 COOH may be used.
- the reaction is carried out in a polar solvent such as DMSO, DMF, NMP, nBuOH, dioxane, DMPU and preferably DMSO at a temperature of 50-130 °C and preferably at 90 °C to 120 °C.
- the reaction products II are isolated per crystallization or chromatography.
- the resulting solution of the zinc reagent is added over 30 min to a mixture of compound III-3 (2.0 g, 6.09 mmol), bis(dibenzylideneacetone)palladium(0) (105 mg, 0.18 mmol) and RuPhos (170 mg, 0.36 mmol) in dry THF (8 mL) at 45-50°C, rinsing with dry THF (4 mL), and the reaction mixture is stirred overnight at this temperature.
- the reaction mixture is cooled to 20 °C and treated with 4 N of aqueous hydrochloric acid (10 mL) and water (14 mL).
- the organic phase is separated and the aqueous phase basified with aqueous ammonia and extracted with DCM.
- the formamidine protecting group present in compounds II can be removed under aqueous acidic or basic conditions.
- Compounds M can be further functionalized at the 2-amino moiety, e.g . by acylation with an appropriate protected aminoacid, to produce SMAC mimetics compounds as those reported in the patent US 2013/0225567 using the general method reported on page 23.
- amide formation starting from the appropriate protected amino acid can also be used.
- a combination of T3P (Propylphosphonic Anhydride) in an organic solvent such as dichloromethane, pyridine, tetrahydrofurane, acetonitrile, ethyl acetate or mixture thereof at a temperature of -30 - +30 °C, preferably at -20/-15 °C.
- Boc-protective groups can be performed as described in WO 2013/127729 and WO 2016/023858 .
- N1, N2 and N4 to N6 can be prepared under analogous conditions by amide coupling of precursors M (analogous conditions include potential deviations from the disclosed conditions in terms of, e.g., solvent, reaction conditions or purification which the skilled artisan is familiar with and takes into account).
- analogous conditions include potential deviations from the disclosed conditions in terms of, e.g., solvent, reaction conditions or purification which the skilled artisan is familiar with and takes into account).
- N1 MS (ESI + ) m/z 668 [M+H] +
- N2 MS (ESI + ) m/z 682 [M+H] +
- N4 MS (ESI + ) m/z 617 [M+H] +
- N5 MS (ESI + ) m/z 682 [M+H] +
- N6 MS (ESI + ) m/z 561 [M+H] +
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- Nitrogen Condensed Heterocyclic Rings (AREA)
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