DK3837379T3 - Fremgangsmåde til nukleinsyreberigelse under anvendelse af stedspecifikke nukleaser efterfulgt af opfangning - Google Patents

Fremgangsmåde til nukleinsyreberigelse under anvendelse af stedspecifikke nukleaser efterfulgt af opfangning Download PDF

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Publication number
DK3837379T3
DK3837379T3 DK19816783.5T DK19816783T DK3837379T3 DK 3837379 T3 DK3837379 T3 DK 3837379T3 DK 19816783 T DK19816783 T DK 19816783T DK 3837379 T3 DK3837379 T3 DK 3837379T3
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procedure
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nucleic acid
specific nucleases
acid enrichment
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DK19816783.5T
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Jimmy Ouellet
Jérôme Maluenda
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Depixus
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2521/00Reaction characterised by the enzymatic activity
    • C12Q2521/30Phosphoric diester hydrolysing, i.e. nuclease
    • C12Q2521/301Endonuclease
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2521/00Reaction characterised by the enzymatic activity
    • C12Q2521/30Phosphoric diester hydrolysing, i.e. nuclease
    • C12Q2521/319Exonuclease
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2537/00Reactions characterised by the reaction format or use of a specific feature
    • C12Q2537/10Reactions characterised by the reaction format or use of a specific feature the purpose or use of
    • C12Q2537/157A reaction step characterised by the number of molecules incorporated or released

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
DK19816783.5T 2018-12-12 2019-12-12 Fremgangsmåde til nukleinsyreberigelse under anvendelse af stedspecifikke nukleaser efterfulgt af opfangning DK3837379T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP18306679 2018-12-12
PCT/EP2019/084983 WO2020120711A1 (en) 2018-12-12 2019-12-12 Method of nucleic acid enrichment using site-specific nucleases followed by capture

Publications (1)

Publication Number Publication Date
DK3837379T3 true DK3837379T3 (da) 2022-06-13

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ID=65279378

Family Applications (1)

Application Number Title Priority Date Filing Date
DK19816783.5T DK3837379T3 (da) 2018-12-12 2019-12-12 Fremgangsmåde til nukleinsyreberigelse under anvendelse af stedspecifikke nukleaser efterfulgt af opfangning

Country Status (10)

Country Link
US (2) US11473124B2 (da)
EP (2) EP4095259A1 (da)
JP (1) JP7405485B2 (da)
CN (2) CN116064730A (da)
AU (1) AU2019398707A1 (da)
CA (1) CA3123151A1 (da)
DK (1) DK3837379T3 (da)
ES (1) ES2921401T3 (da)
IL (1) IL283866B2 (da)
WO (1) WO2020120711A1 (da)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2022007959A1 (zh) * 2020-07-10 2022-01-13 中国科学院动物研究所 一种编辑核酸的系统及方法
CN112795624B (zh) * 2020-07-17 2021-11-19 山东舜丰生物科技有限公司 利用含有无碱基间隔物的核酸检测器检测靶核酸的方法
CN112080551B (zh) * 2020-09-10 2022-06-24 湖南农业大学 一种双酶介导级联信号放大的氨苄西林检测适体传感器
US20230366014A1 (en) * 2020-10-06 2023-11-16 Genetics Research, Llc Nucleic acid enrichment method
CN112941051A (zh) * 2021-04-14 2021-06-11 浙江优诺生物科技有限公司 Fenm蛋白突变体及其应用和含该突变体的试剂盒
WO2023039346A1 (en) * 2021-09-10 2023-03-16 The Regents Of The University Of California Temperature regulated crispr-cas systems and methods of use thereof
WO2023183796A2 (en) * 2022-03-23 2023-09-28 The Rockefeller University Compositions and methods for improved dna-encoded library preparation
CN114836411A (zh) * 2022-04-08 2022-08-02 翌圣生物科技(上海)股份有限公司 基于crispr技术的靶基因捕获的方法
CN116240200A (zh) * 2022-07-01 2023-06-09 中国科学院基础医学与肿瘤研究所(筹) 一种基于可编程核酸酶的超灵敏目标核酸富集检测方法
CN117603965A (zh) * 2022-08-22 2024-02-27 北京脑神康科技开发中心(有限合伙) sgRNA及其在制备用于治疗亨廷顿舞蹈症的产品中的应用

Family Cites Families (19)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
IL73577A (en) 1983-12-12 1989-10-31 Miles Lab Method and reagent system for detecting dna or rna sequences in a test medium containing single stranded dna or rna using antibodies to intercalation complexes with double stranded nucleic acid
CA1223222A (en) 1984-02-22 1987-06-23 Nanibhushan Dattagupta Immobilized nucleic acid-containing probes
ES2081613T3 (es) 1991-03-21 1996-03-16 Johnson & Johnson Clin Diag Elemento y procedimiento para amplificacion y deteccion de acido nucleico usando muestras adheridas.
EP2390350A1 (en) 2010-05-27 2011-11-30 Centre National de la Recherche Scientifique (CNRS) Method of DNA sequencing by polymerisation
EP2390351A1 (en) 2010-05-27 2011-11-30 Centre National de la Recherche Scientifique (CNRS) Method of DNA sequencing by hybridisation
WO2013093005A1 (en) 2011-12-22 2013-06-27 Centre National De La Recherche Scientifique (Cnrs) Method of dna detection and quantification by single-molecule hybridization and manipulation
US9365896B2 (en) * 2012-10-19 2016-06-14 Agilent Technologies, Inc. Addition of an adaptor by invasive cleavage
LT2948774T (lt) 2013-01-22 2018-10-10 Centre National De La Recherche Scientifique (Cnrs) Dnr modifikacijų nustatymo būdas, naudojant vieną molekulę
JP2016537028A (ja) 2013-11-18 2016-12-01 クリスパー セラピューティクス アーゲー Crispr−casシステムの材料及び方法
CA3176503A1 (en) 2014-07-21 2016-01-28 Illumina, Inc Polynucleotide enrichment using crispr-cas systems
US10435685B2 (en) 2014-08-19 2019-10-08 Pacific Biosciences Of California, Inc. Compositions and methods for enrichment of nucleic acids
CA2971444A1 (en) * 2014-12-20 2016-06-23 Arc Bio, Llc Compositions and methods for targeted depletion, enrichment, and partitioning of nucleic acids using crispr/cas system proteins
EP3292217B1 (en) 2015-05-07 2019-07-10 Paris Sciences et Lettres - Quartier Latin Formation of hairpins in situ using force-induced strand invasion
CA2985506A1 (en) * 2015-05-15 2016-11-24 Pioneer Hi-Bred International, Inc. Guide rna/cas endonuclease systems
CN116334142A (zh) 2015-06-09 2023-06-27 爱迪塔斯医药公司 用于改善移植的crispr/cas相关方法和组合物
WO2018013840A1 (en) 2016-07-13 2018-01-18 Vertex Pharmaceuticals Incorporated Methods, compositions and kits for increasing genome editing efficiency
US10081829B1 (en) 2017-06-13 2018-09-25 Genetics Research, Llc Detection of targeted sequence regions
WO2019030306A1 (en) * 2017-08-08 2019-02-14 Depixus ISOLATION AND IN VITRO ENRICHMENT OF NUCLEIC ACIDS USING SITE-SPECIFIC NUCLEASES
WO2020099675A1 (en) * 2018-11-16 2020-05-22 Depixus Optimization of in vitro isolation of nucleic acids using site-specific nucleases

Also Published As

Publication number Publication date
US11473124B2 (en) 2022-10-18
IL283866B (en) 2022-10-01
CN116064730A (zh) 2023-05-05
WO2020120711A1 (en) 2020-06-18
WO2020120711A8 (en) 2021-03-11
US20230086170A1 (en) 2023-03-23
JP2022527725A (ja) 2022-06-06
AU2019398707A1 (en) 2021-07-08
EP3837379B1 (en) 2022-05-18
EP3837379A1 (en) 2021-06-23
CA3123151A1 (en) 2020-06-18
CN113454233B (zh) 2022-10-28
EP4095259A1 (en) 2022-11-30
US20220145357A1 (en) 2022-05-12
ES2921401T3 (es) 2022-08-25
IL283866B2 (en) 2023-02-01
CN113454233A (zh) 2021-09-28
IL283866A (en) 2021-07-29
JP7405485B2 (ja) 2023-12-26

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