DK3507386T3 - Fremgangsmåder og indretning, der øger effektiviteten af sekvensering med binding - Google Patents

Fremgangsmåder og indretning, der øger effektiviteten af sekvensering med binding Download PDF

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Publication number
DK3507386T3
DK3507386T3 DK18724077.5T DK18724077T DK3507386T3 DK 3507386 T3 DK3507386 T3 DK 3507386T3 DK 18724077 T DK18724077 T DK 18724077T DK 3507386 T3 DK3507386 T3 DK 3507386T3
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Denmark
Prior art keywords
sequencing
binding
efficiency
methods
increase
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DK18724077.5T
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English (en)
Inventor
Sean Stromberg
John Vieceli
Kandaswamy Vijayan
Arnold Oliphant
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Omniome Inc
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Priority claimed from US15/712,632 external-priority patent/US9951385B1/en
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6832—Enhancement of hybridisation reaction
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/125—Specific component of sample, medium or buffer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/137—Concentration of a component of medium
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122—Massive parallel sequencing
DK18724077.5T 2017-04-25 2018-04-25 Fremgangsmåder og indretning, der øger effektiviteten af sekvensering med binding DK3507386T3 (da)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201762489610P 2017-04-25 2017-04-25
US201762526514P 2017-06-29 2017-06-29
US15/712,632 US9951385B1 (en) 2017-04-25 2017-09-22 Methods and apparatus that increase sequencing-by-binding efficiency
US15/922,787 US10161003B2 (en) 2017-04-25 2018-03-15 Methods and apparatus that increase sequencing-by-binding efficiency
PCT/US2018/029420 WO2018200709A1 (en) 2017-04-25 2018-04-25 Methods and apparatus that increase sequencing-by-binding efficiency

Publications (1)

Publication Number Publication Date
DK3507386T3 true DK3507386T3 (da) 2020-05-25

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DK18724077.5T DK3507386T3 (da) 2017-04-25 2018-04-25 Fremgangsmåder og indretning, der øger effektiviteten af sekvensering med binding

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US (4) US10161003B2 (da)
EP (2) EP3674417A1 (da)
JP (1) JP6629993B2 (da)
KR (1) KR102071055B1 (da)
CN (1) CN109312394A (da)
AU (1) AU2018258190B2 (da)
CA (1) CA3022960C (da)
DK (1) DK3507386T3 (da)
ES (1) ES2802809T3 (da)
PT (1) PT3507386T (da)
SG (1) SG11201810527TA (da)
WO (1) WO2018200709A1 (da)

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US10161003B2 (en) 2018-12-25
US10655176B2 (en) 2020-05-19
JP2019520047A (ja) 2019-07-18
ES2802809T3 (es) 2021-01-21
CN109312394A (zh) 2019-02-05
KR102071055B1 (ko) 2020-01-29
EP3507386A1 (en) 2019-07-10
US20200347451A1 (en) 2020-11-05
US20230151420A1 (en) 2023-05-18
AU2018258190B2 (en) 2019-02-28
US20190169688A1 (en) 2019-06-06
SG11201810527TA (en) 2018-12-28
EP3674417A1 (en) 2020-07-01
US20180305749A1 (en) 2018-10-25
US11447823B2 (en) 2022-09-20
JP6629993B2 (ja) 2020-01-15
CA3022960C (en) 2019-12-24
CA3022960A1 (en) 2018-11-01
AU2018258190A1 (en) 2018-11-22
KR20180136557A (ko) 2018-12-24
WO2018200709A1 (en) 2018-11-01
PT3507386T (pt) 2020-07-03
EP3507386B1 (en) 2020-04-15

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