DE602005024750D1 - Methode zur Bereitstellung von Sonden und Mikroarrays, deren Verwendung und ein Computerprogramm für die Herstellung der Sonden. - Google Patents

Methode zur Bereitstellung von Sonden und Mikroarrays, deren Verwendung und ein Computerprogramm für die Herstellung der Sonden.

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Publication number
DE602005024750D1
DE602005024750D1 DE602005024750T DE602005024750T DE602005024750D1 DE 602005024750 D1 DE602005024750 D1 DE 602005024750D1 DE 602005024750 T DE602005024750 T DE 602005024750T DE 602005024750 T DE602005024750 T DE 602005024750T DE 602005024750 D1 DE602005024750 D1 DE 602005024750D1
Authority
DE
Germany
Prior art keywords
probes
microarrays
production
computer program
providing
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
DE602005024750T
Other languages
English (en)
Inventor
Tae-Joon Kwon
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Samsung Electronics Co Ltd
Original Assignee
Samsung Electronics Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Samsung Electronics Co Ltd filed Critical Samsung Electronics Co Ltd
Publication of DE602005024750D1 publication Critical patent/DE602005024750D1/de
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6811—Selection methods for production or design of target specific oligonucleotides or binding molecules
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
DE602005024750T 2004-09-14 2005-09-06 Methode zur Bereitstellung von Sonden und Mikroarrays, deren Verwendung und ein Computerprogramm für die Herstellung der Sonden. Active DE602005024750D1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
KR1020040073366A KR100682891B1 (ko) 2004-09-14 2004-09-14 프로브 세트를 설계하는 방법, 그에 의하여 설계된프로브가 고정화된 기판을 갖는 마이크로어레이 및 상기방법을 컴퓨터가 수행할 수 있도록 하는 프로그램을기록한 컴퓨터 판독가능한 매체

Publications (1)

Publication Number Publication Date
DE602005024750D1 true DE602005024750D1 (de) 2010-12-30

Family

ID=36228970

Family Applications (1)

Application Number Title Priority Date Filing Date
DE602005024750T Active DE602005024750D1 (de) 2004-09-14 2005-09-06 Methode zur Bereitstellung von Sonden und Mikroarrays, deren Verwendung und ein Computerprogramm für die Herstellung der Sonden.

Country Status (6)

Country Link
US (1) US7657381B2 (de)
EP (1) EP1634959B1 (de)
JP (1) JP4286243B2 (de)
KR (1) KR100682891B1 (de)
CN (1) CN1782097B (de)
DE (1) DE602005024750D1 (de)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR100745763B1 (ko) * 2005-03-08 2007-08-02 삼성전자주식회사 프로브 세트를 설계하는 방법, 그에 의하여 설계된 프로브세트, 상기 프로브 세트를 포함하는 마이크로어레이, 및상기 프로브 세트를 이용한 표적 서열의 동정 방법
KR101138864B1 (ko) * 2005-03-08 2012-05-14 삼성전자주식회사 프라이머 및 프로브 세트를 설계하는 방법, 그에 의하여 설계된 프라이머 및 프로브 세트, 상기 세트를 포함하는 키트, 상기 방법을 컴퓨터가 수행할 수 있도록 하는 프로그램을기록한 컴퓨터 판독가능한 매체 및 상기 세트를 이용한 표적 서열의 동정 방법
US20060204995A1 (en) * 2005-03-08 2006-09-14 Oh Ji-Young Method of designing probe set, probe set designed by the method, microarray comprising the probe set, computer readable medium recorded thereon program to execute the method, and method of identifying target sequence using the probe set
KR100813263B1 (ko) * 2006-08-17 2008-03-13 삼성전자주식회사 표적 서열 검출용 프로브 설계 방법 및 상기 프로브를이용한 표적 서열 검출 방법
DK2099935T3 (da) * 2006-11-30 2014-04-07 Univ California Array for detektion af mikrober
KR20210067684A (ko) * 2019-11-29 2021-06-08 주식회사 씨젠 올리고뉴클레오타이드 세트들의 최적 조합을 제공하는 방법

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5424186A (en) 1989-06-07 1995-06-13 Affymax Technologies N.V. Very large scale immobilized polymer synthesis
US5143854A (en) 1989-06-07 1992-09-01 Affymax Technologies N.V. Large scale photolithographic solid phase synthesis of polypeptides and receptor binding screening thereof
US5744101A (en) 1989-06-07 1998-04-28 Affymax Technologies N.V. Photolabile nucleoside protecting groups
US7288371B1 (en) * 1996-12-23 2007-10-30 The University Of Chicago Discrimination of Bacillus anthracis from closely related microorganisms by analysis of 16S and 23S rRNA with oligonucleotide microchips
JP4109873B2 (ja) 2001-02-28 2008-07-02 キヤノン株式会社 プローブ設計方法及び情報処理装置
US20020160401A1 (en) 2001-03-29 2002-10-31 Yasuyuki Nozaki Biochip and method of designing probes
JP2002330768A (ja) 2001-05-11 2002-11-19 Hitachi Software Eng Co Ltd プローブ設計方法及びバイオチップ
JP2002296279A (ja) 2001-03-29 2002-10-09 Hitachi Software Eng Co Ltd バイオチップ及びプローブ設計方法
JP3979793B2 (ja) 2001-05-29 2007-09-19 日立ソフトウエアエンジニアリング株式会社 プローブ設計装置及びプローブ設計方法
KR100454585B1 (ko) * 2001-10-09 2004-11-02 주식회사 에스제이하이테크 마이코박테리아의 균주 감별, 결핵균의 스트레인 감별과항생제 내성을 검출하기 위한 프로브를 포함하는마이크로어레이와 이를 이용한 검출 방법 및 진단 키트
US7029854B2 (en) * 2002-11-22 2006-04-18 Agilent Technologies, Inc. Methods designing multiple mRNA transcript nucleic acid probe sequences for use in nucleic acid arrays
KR100506089B1 (ko) * 2003-02-05 2005-08-05 삼성전자주식회사 이형 유전정보를 이용한 프로브 어레이 설계 시스템 및 방법

Also Published As

Publication number Publication date
CN1782097A (zh) 2006-06-07
EP1634959A3 (de) 2006-03-22
US7657381B2 (en) 2010-02-02
EP1634959A2 (de) 2006-03-15
US20060058967A1 (en) 2006-03-16
KR20060024566A (ko) 2006-03-17
JP4286243B2 (ja) 2009-06-24
CN1782097B (zh) 2010-05-12
EP1634959B1 (de) 2010-11-17
KR100682891B1 (ko) 2007-02-15
JP2006087431A (ja) 2006-04-06

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