DE60136724D1 - Methode zur typisierung oder sequenzierung einer nukleinsäure - Google Patents

Methode zur typisierung oder sequenzierung einer nukleinsäure

Info

Publication number
DE60136724D1
DE60136724D1 DE60136724T DE60136724T DE60136724D1 DE 60136724 D1 DE60136724 D1 DE 60136724D1 DE 60136724 T DE60136724 T DE 60136724T DE 60136724 T DE60136724 T DE 60136724T DE 60136724 D1 DE60136724 D1 DE 60136724D1
Authority
DE
Germany
Prior art keywords
nucleic acid
typing
acid molecule
sequencing nucleic
pattern
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
DE60136724T
Other languages
English (en)
Inventor
Mostafa Ronaghi
Bjoern Ekstroem
Nader Pourmand
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Qiagen GmbH
Leland Stanford Junior University
Original Assignee
Biotage AB
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Biotage AB filed Critical Biotage AB
Application granted granted Critical
Publication of DE60136724D1 publication Critical patent/DE60136724D1/de
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Semiconductor Lasers (AREA)
DE60136724T 2000-09-08 2001-09-10 Methode zur typisierung oder sequenzierung einer nukleinsäure Expired - Lifetime DE60136724D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
GBGB0022069.9A GB0022069D0 (en) 2000-09-08 2000-09-08 Method
PCT/GB2001/004042 WO2002020837A2 (en) 2000-09-08 2001-09-10 Method of nucleic acid typing or sequencing

Publications (1)

Publication Number Publication Date
DE60136724D1 true DE60136724D1 (de) 2009-01-08

Family

ID=9899101

Family Applications (1)

Application Number Title Priority Date Filing Date
DE60136724T Expired - Lifetime DE60136724D1 (de) 2000-09-08 2001-09-10 Methode zur typisierung oder sequenzierung einer nukleinsäure

Country Status (10)

Country Link
US (1) US20050084851A1 (de)
EP (1) EP1322782B1 (de)
JP (1) JP4945779B2 (de)
AT (1) ATE415490T1 (de)
AU (1) AU2001284308A1 (de)
CA (1) CA2421857A1 (de)
DE (1) DE60136724D1 (de)
ES (1) ES2317928T3 (de)
GB (1) GB0022069D0 (de)
WO (1) WO2002020837A2 (de)

Families Citing this family (38)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6780591B2 (en) 1998-05-01 2004-08-24 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
US7875440B2 (en) 1998-05-01 2011-01-25 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
ATE454470T1 (de) * 2002-07-26 2010-01-15 Abbott Lab Verfahren zum nachweis und zur quantifizierung von hepatitis-c-virus
WO2004029294A1 (en) * 2002-09-27 2004-04-08 Biotage Ab New sequencing method for sequencing rna molecules
EP2159285B1 (de) 2003-01-29 2012-09-26 454 Life Sciences Corporation Verfahren zur Verstärkung und Sequenzierung von Nukleinsäuren
US7829312B2 (en) 2003-04-11 2010-11-09 Dna Landmarks, Inc. Methods for relative quantification of specific nucleic acid sequences
US20070111213A1 (en) 2003-10-28 2007-05-17 Lu Wang Primers, methods and kits for amplifying or detecting human leukocyte antigen alleles
US7169560B2 (en) 2003-11-12 2007-01-30 Helicos Biosciences Corporation Short cycle methods for sequencing polynucleotides
DE10356783A1 (de) * 2003-12-02 2005-07-07 Universität Zu Köln Verfahren zur Multiplex-Sequenzierung
FR2866349B1 (fr) * 2004-02-12 2008-05-16 Biomerieux Sa Procede de diagnostic/pronostic d'une thrombose
ATE463584T1 (de) 2004-02-19 2010-04-15 Helicos Biosciences Corp Verfahren zur analyse von polynukleotidsequenzen
GB0406864D0 (en) 2004-03-26 2004-04-28 Qiagen As Nucleic acid sequencing
GB0406863D0 (en) * 2004-03-26 2004-04-28 Qiagen As Nucleic acid sequencing
GB0406865D0 (en) * 2004-03-26 2004-04-28 Qiagen Gmbh Nucleic acid sequencing
US7785785B2 (en) 2004-11-12 2010-08-31 The Board Of Trustees Of The Leland Stanford Junior University Charge perturbation detection system for DNA and other molecules
ATE490315T1 (de) * 2004-11-24 2010-12-15 Immunehealth Screening-verfahren für homologe rekombinationsereignisse
US7666593B2 (en) 2005-08-26 2010-02-23 Helicos Biosciences Corporation Single molecule sequencing of captured nucleic acids
US20120035062A1 (en) * 2010-06-11 2012-02-09 Life Technologies Corporation Alternative nucleotide flows in sequencing-by-synthesis methods
US10273540B2 (en) 2010-10-27 2019-04-30 Life Technologies Corporation Methods and apparatuses for estimating parameters in a predictive model for use in sequencing-by-synthesis
EP3141614B1 (de) 2010-10-27 2018-11-28 Life Technologies Corporation Prädiktives modell zur verwendung für sequenzierung nach synthese
WO2012118555A1 (en) 2010-12-29 2012-09-07 Life Technologies Corporation Time-warped background signal for sequencing-by-synthesis operations
US20130060482A1 (en) 2010-12-30 2013-03-07 Life Technologies Corporation Methods, systems, and computer readable media for making base calls in nucleic acid sequencing
WO2012092455A2 (en) 2010-12-30 2012-07-05 Life Technologies Corporation Models for analyzing data from sequencing-by-synthesis operations
WO2012092515A2 (en) 2010-12-30 2012-07-05 Life Technologies Corporation Methods, systems, and computer readable media for nucleic acid sequencing
WO2012138921A1 (en) 2011-04-08 2012-10-11 Life Technologies Corporation Phase-protecting reagent flow orderings for use in sequencing-by-synthesis
WO2013017702A1 (es) * 2011-08-01 2013-02-07 2B Blackbio S.L. Método para la determinación del genotipo de secuencias múltiples
US10704164B2 (en) 2011-08-31 2020-07-07 Life Technologies Corporation Methods, systems, computer readable media, and kits for sample identification
US9646132B2 (en) 2012-05-11 2017-05-09 Life Technologies Corporation Models for analyzing data from sequencing-by-synthesis operations
US10329608B2 (en) 2012-10-10 2019-06-25 Life Technologies Corporation Methods, systems, and computer readable media for repeat sequencing
US20140296080A1 (en) 2013-03-14 2014-10-02 Life Technologies Corporation Methods, Systems, and Computer Readable Media for Evaluating Variant Likelihood
US9926597B2 (en) 2013-07-26 2018-03-27 Life Technologies Corporation Control nucleic acid sequences for use in sequencing-by-synthesis and methods for designing the same
JP6532456B2 (ja) 2013-10-04 2019-06-19 ライフ テクノロジーズ コーポレーション 終止化学を用いる配列決定における整相効果（ｐｈａｓｉｎｇ ｅｆｆｅｃｔｓ）をモデル化するための方法及びシステム
EP2860262A1 (de) * 2013-10-09 2015-04-15 Universität Heidelberg Verfahren zur quantitativen Analyse von Nukleinsäurefragmentierung und Verstärkbarkeit
WO2016060974A1 (en) 2014-10-13 2016-04-21 Life Technologies Corporation Methods, systems, and computer-readable media for accelerated base calling
US10978174B2 (en) 2015-05-14 2021-04-13 Life Technologies Corporation Barcode sequences, and related systems and methods
US10619205B2 (en) 2016-05-06 2020-04-14 Life Technologies Corporation Combinatorial barcode sequences, and related systems and methods
EP3469102B1 (de) 2016-06-10 2023-01-25 Roche Diagnostics GmbH Zusammensetzungen und verfahren zur detektion von hepatitis-c-virus-genotyp 3
CN107841554A (zh) * 2017-11-24 2018-03-27 南京艾迪康医学检验所有限公司 检测凝血因子xii(f12)基因突变的引物、试剂盒和方法

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
NO155316C (no) * 1982-04-23 1987-03-11 Sintef Fremgangsmaate for fremstilling av magnetiske polymerpartikler.
US4863849A (en) * 1985-07-18 1989-09-05 New York Medical College Automatable process for sequencing nucleotide
JP4663824B2 (ja) * 1996-12-31 2011-04-06 ハイ スループット ジェノミクス インコーポレイテッド 多重化分子分析装置および方法
GB9901475D0 (en) * 1999-01-22 1999-03-17 Pyrosequencing Ab A method of DNA sequencing
AU3498900A (en) * 1999-02-23 2000-09-14 Caliper Technologies Corporation Sequencing by incorporation
US20030108867A1 (en) * 1999-04-20 2003-06-12 Chee Mark S Nucleic acid sequencing using microsphere arrays
US20030082549A1 (en) * 2000-08-30 2003-05-01 Xiangjun Liu Method for determining alleles

Also Published As

Publication number Publication date
CA2421857A1 (en) 2002-03-14
US20050084851A1 (en) 2005-04-21
JP2004508055A (ja) 2004-03-18
AU2001284308A1 (en) 2002-03-22
EP1322782A2 (de) 2003-07-02
ATE415490T1 (de) 2008-12-15
GB0022069D0 (en) 2000-10-25
ES2317928T3 (es) 2009-05-01
EP1322782B1 (de) 2008-11-26
WO2002020837A2 (en) 2002-03-14
JP4945779B2 (ja) 2012-06-06
WO2002020837A3 (en) 2003-03-13

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Legal Events

Date Code Title Description
8327 Change in the person/name/address of the patent owner

Owner name: QIAGEN GMBH, 40724 HILDEN, DE

Owner name: THE BOARD OF TRUSTEES OF THE LELAND STANFORD J, US

8364 No opposition during term of opposition