CN105121649A - 靶向修饰藻基因组的方法 - Google Patents

靶向修饰藻基因组的方法 Download PDF

Info

Publication number
CN105121649A
CN105121649A CN201380070530.7A CN201380070530A CN105121649A CN 105121649 A CN105121649 A CN 105121649A CN 201380070530 A CN201380070530 A CN 201380070530A CN 105121649 A CN105121649 A CN 105121649A
Authority
CN
China
Prior art keywords
tale
gene
seq
nuclease
rare
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CN201380070530.7A
Other languages
English (en)
Chinese (zh)
Inventor
P·迪沙托
F·达布西
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Celtic Corp
TotalEnergies Marketing Services SA
Original Assignee
Celtic Corp
Total Marketing Services SA
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Celtic Corp, Total Marketing Services SA filed Critical Celtic Corp
Publication of CN105121649A publication Critical patent/CN105121649A/zh
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8201—Methods for introducing genetic material into plant cells, e.g. DNA, RNA, stable or transient incorporation, tissue culture methods adapted for transformation
    • C12N15/8213—Targeted insertion of genes into the plant genome by homologous recombination
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/12—Unicellular algae; Culture media therefor
    • C12N1/125—Unicellular algae isolates
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/52—Genes encoding for enzymes or proenzymes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10—Transferases (2.)
    • C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241—Nucleotidyltransferases (2.7.7)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14—Hydrolases (3)
    • C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
    • C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K2319/00—Fusion polypeptide
    • C07K2319/80—Fusion polypeptide containing a DNA binding domain, e.g. Lacl or Tet-repressor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
    • C12R2001/00—Microorganisms ; Processes using microorganisms
    • C12R2001/89—Algae ; Processes using algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y207/00—Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/07—Nucleotidyltransferases (2.7.7)
    • C12Y207/07009—UTP-glucose-1-phosphate uridylyltransferase (2.7.7.9), i.e. UDP-glucose-pyrophosphorylase
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y301/00—Hydrolases acting on ester bonds (3.1)
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y301/00—Hydrolases acting on ester bonds (3.1)
    • C12Y301/11—Exodeoxyribonucleases producing 5'-phosphomonoesters (3.1.11)
    • C12Y301/11002—Exodeoxyribonuclease III (3.1.11.2)

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biomedical Technology (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Biophysics (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Cell Biology (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Botany (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Virology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Enzymes And Modification Thereof (AREA)
CN201380070530.7A 2012-11-16 2013-11-18 靶向修饰藻基因组的方法 Pending CN105121649A (zh)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201261727444P 2012-11-16 2012-11-16
US61/727,444 2012-11-16
US201361839165P 2013-06-25 2013-06-25
US61/839,165 2013-06-25
PCT/IB2013/002974 WO2014076571A2 (en) 2012-11-16 2013-11-18 Method for targeted modification of algae genomes

Publications (1)

Publication Number Publication Date
CN105121649A true CN105121649A (zh) 2015-12-02

Family

ID=50231458

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201380070530.7A Pending CN105121649A (zh) 2012-11-16 2013-11-18 靶向修饰藻基因组的方法

Country Status (7)

Country Link
US (1) US20160272980A1 (cg-RX-API-DMAC7.html)
EP (1) EP2920310A2 (cg-RX-API-DMAC7.html)
CN (1) CN105121649A (cg-RX-API-DMAC7.html)
AU (1) AU2013346504A1 (cg-RX-API-DMAC7.html)
BR (1) BR112015011190A2 (cg-RX-API-DMAC7.html)
IN (1) IN2015DN04148A (cg-RX-API-DMAC7.html)
WO (1) WO2014076571A2 (cg-RX-API-DMAC7.html)

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105567681A (zh) * 2015-12-31 2016-05-11 广州赛哲生物科技股份有限公司 一种基于高通量基因测序无创活检病毒的方法及标签接头
CN110741090A (zh) * 2017-05-09 2020-01-31 赛安诺生物技术有限责任公司 用于修饰微囊藻毒素和节球藻毒素的方法

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2915779A1 (en) * 2013-06-25 2014-12-31 Cellectis Modified diatoms for biofuel production
EP3283090B1 (en) 2015-04-15 2023-06-07 Synthetic Genomics, Inc. Algal chloroplastic srp54 mutants
BR112020011350A2 (pt) 2017-12-08 2020-11-17 Synthetic Genomics, Inc. aperfeiçoamento da produtividade lipídica de algas através da modificação genética de uma proteína que contém domínio de tpr
US11193132B2 (en) 2017-12-29 2021-12-07 Synthetic Genomics, Inc. Genetic modulation of photosynthetic organisms for improved growth
US11352618B2 (en) 2018-03-23 2022-06-07 Sean Raspet Modified organisms for improved flavor and aroma
WO2019200318A1 (en) * 2018-04-13 2019-10-17 Sean Raspet Modified organisms for improved flavor and aroma
CN112813091A (zh) * 2021-02-03 2021-05-18 山东农业大学 Nat1基因作为筛选标记在卵菌遗传转化中的应用
US20250223542A1 (en) 2022-04-14 2025-07-10 Institute Of Agricultural Resources And Regional Planning Of The Chinese Acade Modified microalgae for enhanced phosphate uptade involving overexpression of psr1 and optionally underexpression of ptc1
EP4638699A1 (en) 2022-12-19 2025-10-29 Hutanbio Ltd. Lipid producing marine microalga

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20120027607A1 (en) * 2010-07-27 2012-02-02 General Electric Company Nickel alloy and articles
WO2012017329A2 (en) * 2010-08-02 2012-02-09 Cellectis S.A. Method for targeted genomic events in algae
CN102762726A (zh) * 2009-11-27 2012-10-31 巴斯夫植物科学有限公司 嵌合内切核酸酶及其用途

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
FR2646438B1 (fr) 1989-03-20 2007-11-02 Pasteur Institut Procede de remplacement specifique d'une copie d'un gene present dans le genome receveur par l'integration d'un gene different de celui ou se fait l'integration
US5516670A (en) 1991-09-30 1996-05-14 Kuehnle; Adelheid R. Magnetophoretic particle delivery method and apparatus for the treatment of cells
US6027900A (en) * 1996-04-12 2000-02-22 Carnegie Institution Of Washington Methods and tools for transformation of eukaryotic algae
WO2001084565A2 (en) 2000-05-02 2001-11-08 Kuehnle Manfred R Method and apparatus for manufacture of magnetizable microparticles
EP1485475B2 (en) 2002-03-15 2017-09-20 Cellectis Hybrid and single chain meganucleases and use thereof
WO2009095742A1 (en) 2008-01-31 2009-08-06 Cellectis New i-crei derived single-chain meganuclease and uses thereof
WO2006097854A1 (en) 2005-03-15 2006-09-21 Cellectis Heterodimeric meganucleases and use thereof
WO2008093152A1 (en) 2007-02-01 2008-08-07 Cellectis Obligate heterodimer meganucleases and uses thereof
CA2782014C (en) 2009-11-27 2021-08-31 Basf Plant Science Company Gmbh Optimized endonucleases and uses thereof
WO2011146121A1 (en) 2010-05-17 2011-11-24 Sangamo Biosciences, Inc. Novel dna-binding proteins and uses thereof
ES2748430T3 (es) * 2011-02-28 2020-03-16 Seattle Childrens Res Institute Endonucleasas de acoplamiento con enzimas de procesamiento de extremos que impulsan la interrupción génica de alta eficiencia
CN103608027B (zh) 2011-04-05 2016-01-20 赛莱蒂克斯公司 用于生成致密tale-核酸酶的方法及其用途

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102762726A (zh) * 2009-11-27 2012-10-31 巴斯夫植物科学有限公司 嵌合内切核酸酶及其用途
US20120027607A1 (en) * 2010-07-27 2012-02-02 General Electric Company Nickel alloy and articles
WO2012017329A2 (en) * 2010-08-02 2012-02-09 Cellectis S.A. Method for targeted genomic events in algae

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
DONALD P. WEEKS: "Homologous recombination in Nannochloropsis: A powerful tool in an industrially relevant alga", 《PNAS》 *
JENS BOCH 等: "Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors", 《SCIENCE》 *
MATTHEW J. MOSCOU 等: "A Simple Cipher Governs DNA Recognition by TAL Effectors", 《SCIENCE》 *
MICHAEL T CERTO 等: "Coupling endonucleases with DNA end–processing enzymes to drive gene disruption", 《NATURE METHODS》 *
赵开军 等: "TALENs：植物基因组定点碱基的分子剪", 《中国农业科学》 *

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105567681A (zh) * 2015-12-31 2016-05-11 广州赛哲生物科技股份有限公司 一种基于高通量基因测序无创活检病毒的方法及标签接头
CN105567681B (zh) * 2015-12-31 2018-08-31 广州赛哲生物科技股份有限公司 一种基于高通量基因测序无创活检病毒的方法及标签接头
CN110741090A (zh) * 2017-05-09 2020-01-31 赛安诺生物技术有限责任公司 用于修饰微囊藻毒素和节球藻毒素的方法

Also Published As

Publication number Publication date
WO2014076571A8 (en) 2014-07-10
IN2015DN04148A (cg-RX-API-DMAC7.html) 2015-10-16
WO2014076571A9 (en) 2015-04-02
WO2014076571A2 (en) 2014-05-22
WO2014076571A3 (en) 2014-11-06
AU2013346504A1 (en) 2015-06-18
EP2920310A2 (en) 2015-09-23
US20160272980A1 (en) 2016-09-22
BR112015011190A2 (pt) 2017-10-03

Similar Documents

Publication Publication Date Title
CN105121649A (zh) 靶向修饰藻基因组的方法
EP3080275B1 (en) Method of selection of transformed diatoms using nuclease
JP7011590B2 (ja) 細胞内での遺伝子組換えおよび相同組換えの増加のための保護ｄｎａ鋳型および使用方法
US10087453B2 (en) Modified diatoms for biofuel production
KR20180002852A (ko) 가이드 RNA/Cas 엔도뉴클레아제 시스템
KR101929239B1 (ko) Ｒｇｅｎ ｒｎｐ를 이용한 미세조류의 교정 방법
EP2601297B1 (en) Method for targeted genomic events in algae
CN110804628A (zh) 高特异性无脱靶单碱基基因编辑工具
KR20200098424A (ko) 유전자 총법을 이용한 미세조류의 교정 방법
JP2021505158A (ja) Ｔｐｒドメイン含有タンパク質の遺伝子改変を介した藻類脂質生産性の改善方法
JP2021505144A (ja) シグナル伝達タンパク質の遺伝子改変を介した藻類脂質生産性の改善方法
Basak et al. Scope and Opportunities
BR112018007351B1 (pt) Métodos de seleção de células microbianas
BR122024004319A2 (pt) Proteína de fusão compreendendo uma proteína cas9 e uma proteína spo11, e célula hospedeira compreendendo a proteína de fusão

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
RJ01 Rejection of invention patent application after publication

Application publication date: 20151202

RJ01 Rejection of invention patent application after publication