CN102272334B - 新基因组测序策略 - Google Patents

新基因组测序策略 Download PDF

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Publication number
CN102272334B
CN102272334B CN201080004824.6A CN201080004824A CN102272334B CN 102272334 B CN102272334 B CN 102272334B CN 201080004824 A CN201080004824 A CN 201080004824A CN 102272334 B CN102272334 B CN 102272334B
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China
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sequence
fragment
joint
contig
dna
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Expired - Fee Related
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CN201080004824.6A
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English (en)
Chinese (zh)
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CN102272334A (zh
Inventor
M·J·T·范艾杰克
A·J·范托恩
A·A·A·W·扬森
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Keygene NV
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Keygene NV
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
    • C12Q1/6855—Ligating adaptors

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN201080004824.6A 2009-01-13 2010-01-13 新基因组测序策略 Expired - Fee Related CN102272334B (zh)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
US14428109P 2009-01-13 2009-01-13
US61/144,281 2009-01-13
US22646809P 2009-07-17 2009-07-17
NL2003235 2009-07-17
NL2003235 2009-07-17
US61/226,468 2009-07-17
PCT/NL2010/000003 WO2010082815A1 (en) 2009-01-13 2010-01-13 Novel genome sequencing strategies

Publications (2)

Publication Number Publication Date
CN102272334A CN102272334A (zh) 2011-12-07
CN102272334B true CN102272334B (zh) 2014-08-20

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Family Applications (1)

Application Number Title Priority Date Filing Date
CN201080004824.6A Expired - Fee Related CN102272334B (zh) 2009-01-13 2010-01-13 新基因组测序策略

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US (1) US20130196859A1 (enExample)
EP (1) EP2379751B1 (enExample)
JP (1) JP2012514977A (enExample)
CN (1) CN102272334B (enExample)
ES (1) ES2403312T3 (enExample)
WO (1) WO2010082815A1 (enExample)

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WO2013152505A1 (zh) * 2012-04-13 2013-10-17 深圳华大基因科技服务有限公司 一种转录组组装的方法及系统
KR102393608B1 (ko) * 2012-09-04 2022-05-03 가던트 헬쓰, 인크. 희귀 돌연변이 및 카피수 변이를 검출하기 위한 시스템 및 방법
CA2884246C (en) * 2012-09-24 2023-11-07 Cb Biotechnologies, Inc. Multiplex pyrosequencing using non-interfering noise-canceling polynucleotide identification tags
CN102982252A (zh) * 2012-12-05 2013-03-20 北京诺禾致源生物信息科技有限公司 一种高杂合二倍体基因组支架序列组装策略
CN111383715B (zh) * 2013-04-17 2024-09-10 先锋国际良种公司 用于在基因组中表征dna序列组成的方法
CN103388025B (zh) * 2013-07-10 2015-04-29 华中农业大学 基于克隆dna混合池的全基因组测序方法
EP3495496B1 (en) 2013-10-07 2020-11-25 Sequenom, Inc. Methods and processes for non-invasive assessment of chromosome alterations
JP6418800B2 (ja) * 2014-06-17 2018-11-07 国立大学法人 東京大学 外来性ｄｎａのゲノムへの導入位置の決定法
US9710296B2 (en) 2014-12-09 2017-07-18 Vmware, Inc. Allocating cost of disk usage to a linked clone virtual machine
US9582309B2 (en) 2014-12-09 2017-02-28 Vmware, Inc. Allocating cost of disk usage to a linked clone virtual machine based on a parameter of usage
EP4030437A1 (en) * 2015-02-17 2022-07-20 Dovetail Genomics, LLC Nucleic acid sequence assembly
CN106021978B (zh) * 2016-04-06 2019-03-29 晶能生物技术（上海）有限公司 基于光学图谱平台Irys的一种de novo测序数据组装方法
CN106778060B (zh) * 2016-10-09 2019-05-21 南京双运生物技术有限公司 一种利用原核生物基因组高质量草图制作完成图的方法
CN108660197A (zh) * 2017-04-01 2018-10-16 深圳华大基因科技服务有限公司 一种二代序列基因组重叠群的组装方法和系统

Citations (1)

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WO2008007951A1 (en) * 2006-07-12 2008-01-17 Keygene N.V. High throughput physical mapping using aflp

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WO2000024939A1 (en) 1998-10-27 2000-05-04 Affymetrix, Inc. Complexity management and analysis of genomic dna
WO2000027521A1 (en) 1998-11-06 2000-05-18 Solexa Ltd. A method for reproducing molecular arrays
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Also Published As

Publication number Publication date
CN102272334A (zh) 2011-12-07
EP2379751B1 (en) 2013-03-20
EP2379751A1 (en) 2011-10-26
ES2403312T3 (es) 2013-05-17
JP2012514977A (ja) 2012-07-05
US20130196859A1 (en) 2013-08-01
WO2010082815A1 (en) 2010-07-22

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