ES2403312T3 - Nuevas estrategias para la secuenciación del genoma - Google Patents
Nuevas estrategias para la secuenciación del genoma Download PDFInfo
- Publication number
- ES2403312T3 ES2403312T3 ES10701404T ES10701404T ES2403312T3 ES 2403312 T3 ES2403312 T3 ES 2403312T3 ES 10701404 T ES10701404 T ES 10701404T ES 10701404 T ES10701404 T ES 10701404T ES 2403312 T3 ES2403312 T3 ES 2403312T3
- Authority
- ES
- Spain
- Prior art keywords
- sequence
- fragments
- sequencing
- adapter
- clones
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
- C12Q1/6855—Ligating adaptors
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (7)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US14428109P | 2009-01-13 | 2009-01-13 | |
| US144281P | 2009-01-13 | ||
| US22646809P | 2009-07-17 | 2009-07-17 | |
| NL2003235 | 2009-07-17 | ||
| US226468P | 2009-07-17 | ||
| NL2003235 | 2009-07-17 | ||
| PCT/NL2010/000003 WO2010082815A1 (en) | 2009-01-13 | 2010-01-13 | Novel genome sequencing strategies |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ES2403312T3 true ES2403312T3 (es) | 2013-05-17 |
Family
ID=41277440
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ES10701404T Active ES2403312T3 (es) | 2009-01-13 | 2010-01-13 | Nuevas estrategias para la secuenciación del genoma |
Country Status (6)
| Country | Link |
|---|---|
| US (1) | US20130196859A1 (enExample) |
| EP (1) | EP2379751B1 (enExample) |
| JP (1) | JP2012514977A (enExample) |
| CN (1) | CN102272334B (enExample) |
| ES (1) | ES2403312T3 (enExample) |
| WO (1) | WO2010082815A1 (enExample) |
Families Citing this family (16)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JP2013514079A (ja) * | 2009-12-17 | 2013-04-25 | キージーン・エン・フェー | 制限酵素に基づく全ゲノムシーケンシング |
| FR2968671B1 (fr) * | 2010-12-13 | 2015-05-01 | Chaouki Miled | Sequencage maspet |
| WO2013152505A1 (zh) * | 2012-04-13 | 2013-10-17 | 深圳华大基因科技服务有限公司 | 一种转录组组装的方法及系统 |
| KR102393608B1 (ko) * | 2012-09-04 | 2022-05-03 | 가던트 헬쓰, 인크. | 희귀 돌연변이 및 카피수 변이를 검출하기 위한 시스템 및 방법 |
| CA2884246C (en) * | 2012-09-24 | 2023-11-07 | Cb Biotechnologies, Inc. | Multiplex pyrosequencing using non-interfering noise-canceling polynucleotide identification tags |
| CN102982252A (zh) * | 2012-12-05 | 2013-03-20 | 北京诺禾致源生物信息科技有限公司 | 一种高杂合二倍体基因组支架序列组装策略 |
| CN111383715B (zh) * | 2013-04-17 | 2024-09-10 | 先锋国际良种公司 | 用于在基因组中表征dna序列组成的方法 |
| CN103388025B (zh) * | 2013-07-10 | 2015-04-29 | 华中农业大学 | 基于克隆dna混合池的全基因组测序方法 |
| EP3495496B1 (en) | 2013-10-07 | 2020-11-25 | Sequenom, Inc. | Methods and processes for non-invasive assessment of chromosome alterations |
| JP6418800B2 (ja) * | 2014-06-17 | 2018-11-07 | 国立大学法人 東京大学 | 外来性ｄｎａのゲノムへの導入位置の決定法 |
| US9710296B2 (en) | 2014-12-09 | 2017-07-18 | Vmware, Inc. | Allocating cost of disk usage to a linked clone virtual machine |
| US9582309B2 (en) | 2014-12-09 | 2017-02-28 | Vmware, Inc. | Allocating cost of disk usage to a linked clone virtual machine based on a parameter of usage |
| EP4030437A1 (en) * | 2015-02-17 | 2022-07-20 | Dovetail Genomics, LLC | Nucleic acid sequence assembly |
| CN106021978B (zh) * | 2016-04-06 | 2019-03-29 | 晶能生物技术（上海）有限公司 | 基于光学图谱平台Irys的一种de novo测序数据组装方法 |
| CN106778060B (zh) * | 2016-10-09 | 2019-05-21 | 南京双运生物技术有限公司 | 一种利用原核生物基因组高质量草图制作完成图的方法 |
| CN108660197A (zh) * | 2017-04-01 | 2018-10-16 | 深圳华大基因科技服务有限公司 | 一种二代序列基因组重叠群的组装方法和系统 |
Family Cites Families (31)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| HU223760B1 (hu) | 1991-09-24 | 2005-01-28 | Keygene N.V. | Szelektív restrikciós fragmentumsokszorosítás, általános módszer DNS-fingerprint analízisére |
| GB0002310D0 (en) | 2000-02-01 | 2000-03-22 | Solexa Ltd | Polynucleotide sequencing |
| WO2002061127A2 (en) | 2001-01-30 | 2002-08-08 | Solexa Ltd. | Arrayed polynucleotides and their use in genome analysis |
| EP1105529B2 (en) | 1998-07-30 | 2013-05-29 | Illumina Cambridge Limited | Arrayed biomolecules and their use in sequencing |
| WO2000024939A1 (en) | 1998-10-27 | 2000-05-04 | Affymetrix, Inc. | Complexity management and analysis of genomic dna |
| WO2000027521A1 (en) | 1998-11-06 | 2000-05-18 | Solexa Ltd. | A method for reproducing molecular arrays |
| WO2000058507A1 (en) | 1999-03-30 | 2000-10-05 | Solexa Ltd. | Polynucleotide sequencing |
| EP1218543A2 (en) | 1999-09-29 | 2002-07-03 | Solexa Ltd. | Polynucleotide sequencing |
| US6958225B2 (en) | 1999-10-27 | 2005-10-25 | Affymetrix, Inc. | Complexity management of genomic DNA |
| GB0002389D0 (en) | 2000-02-02 | 2000-03-22 | Solexa Ltd | Molecular arrays |
| US7809509B2 (en) | 2001-05-08 | 2010-10-05 | Ip Genesis, Inc. | Comparative mapping and assembly of nucleic acid sequences |
| JP2005520484A (ja) | 2001-07-06 | 2005-07-14 | ４５４ コーポレイション | 多孔性フィルターを使用し、独立した並行する化学的微量反応を隔離するための方法 |
| GB0119719D0 (en) | 2001-08-13 | 2001-10-03 | Solexa Ltd | DNA sequence analysis |
| US6975943B2 (en) | 2001-09-24 | 2005-12-13 | Seqwright, Inc. | Clone-array pooled shotgun strategy for nucleic acid sequencing |
| US6902921B2 (en) | 2001-10-30 | 2005-06-07 | 454 Corporation | Sulfurylase-luciferase fusion proteins and thermostable sulfurylase |
| US7057026B2 (en) | 2001-12-04 | 2006-06-06 | Solexa Limited | Labelled nucleotides |
| SI3363809T1 (sl) | 2002-08-23 | 2020-08-31 | Illumina Cambridge Limited | Modificirani nukleotidi za polinukleotidno sekvenciranje |
| PT2119722T (pt) | 2002-08-23 | 2016-12-12 | Illumina Cambridge Ltd | Nucleótidos marcados |
| AU2003290223A1 (en) | 2002-12-02 | 2004-06-23 | Solexa Limited | Determination of methylation of nucleic acid sequences |
| CA2513535C (en) | 2003-01-29 | 2012-06-12 | 454 Corporation | Bead emulsion nucleic acid amplification |
| GB0304371D0 (en) | 2003-02-26 | 2003-04-02 | Solexa Ltd | DNA Sequence analysis |
| GB0320059D0 (en) | 2003-08-27 | 2003-10-01 | Solexa Ltd | A method of sequencing |
| GB0326073D0 (en) | 2003-11-07 | 2003-12-10 | Solexa Ltd | Improvements in or relating to polynucleotide arrays |
| JP2007525571A (ja) | 2004-01-07 | 2007-09-06 | ソレクサ リミテッド | 修飾分子アレイ |
| GB0400584D0 (en) | 2004-01-12 | 2004-02-11 | Solexa Ltd | Nucleic acid chacterisation |
| GB0400974D0 (en) | 2004-01-16 | 2004-02-18 | Solexa Ltd | Multiple inexact matching |
| GB0402895D0 (en) | 2004-02-10 | 2004-03-17 | Solexa Ltd | Arrayed polynucleotides |
| CA2613248A1 (en) | 2005-06-23 | 2006-12-28 | Keygene N.V. | Improved strategies for sequencing complex genomes using high throughput sequencing technologies |
| US20070082358A1 (en) | 2005-10-11 | 2007-04-12 | Roderic Fuerst | Sequencing by synthesis based ordered restriction mapping |
| DE602007009233D1 (de) * | 2006-07-12 | 2010-10-28 | Keygene Nv | Genomische kartierung mit hohem durchsatz unter verwendung von aflp |
| US8143030B2 (en) * | 2008-09-24 | 2012-03-27 | Pacific Biosciences Of California, Inc. | Intermittent detection during analytical reactions |
-
2010
- 2010-01-13 CN CN201080004824.6A patent/CN102272334B/zh not_active Expired - Fee Related
- 2010-01-13 WO PCT/NL2010/000003 patent/WO2010082815A1/en not_active Ceased
- 2010-01-13 JP JP2011545311A patent/JP2012514977A/ja active Pending
- 2010-01-13 ES ES10701404T patent/ES2403312T3/es active Active
- 2010-01-13 EP EP10701404A patent/EP2379751B1/en not_active Not-in-force
-
2011
- 2011-01-13 US US13/144,173 patent/US20130196859A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| CN102272334A (zh) | 2011-12-07 |
| EP2379751B1 (en) | 2013-03-20 |
| EP2379751A1 (en) | 2011-10-26 |
| CN102272334B (zh) | 2014-08-20 |
| JP2012514977A (ja) | 2012-07-05 |
| US20130196859A1 (en) | 2013-08-01 |
| WO2010082815A1 (en) | 2010-07-22 |
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