CN101918831B - 以dna微阵列为基础的平衡易位断点的鉴定和定位 - Google Patents

以dna微阵列为基础的平衡易位断点的鉴定和定位 Download PDF

Info

Publication number
CN101918831B
CN101918831B CN200880124084.2A CN200880124084A CN101918831B CN 101918831 B CN101918831 B CN 101918831B CN 200880124084 A CN200880124084 A CN 200880124084A CN 101918831 B CN101918831 B CN 101918831B
Authority
CN
China
Prior art keywords
dna
amplification
methods
microarray
hybridization
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
CN200880124084.2A
Other languages
English (en)
Chinese (zh)
Other versions
CN101918831A (zh
Inventor
H·A·格赖斯曼
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of Washington
Original Assignee
University of Washington
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of Washington filed Critical University of Washington
Publication of CN101918831A publication Critical patent/CN101918831A/zh
Application granted granted Critical
Publication of CN101918831B publication Critical patent/CN101918831B/zh
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/118Prognosis of disease development

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
CN200880124084.2A 2007-11-08 2008-11-10 以dna微阵列为基础的平衡易位断点的鉴定和定位 Expired - Fee Related CN101918831B (zh)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US98657607P 2007-11-08 2007-11-08
US60/986,576 2007-11-08
PCT/US2008/083014 WO2009062166A2 (en) 2007-11-08 2008-11-10 Dna microarray based identification and mapping of balanced translocation breakpoints

Publications (2)

Publication Number Publication Date
CN101918831A CN101918831A (zh) 2010-12-15
CN101918831B true CN101918831B (zh) 2014-10-15

Family

ID=40626471

Family Applications (1)

Application Number Title Priority Date Filing Date
CN200880124084.2A Expired - Fee Related CN101918831B (zh) 2007-11-08 2008-11-10 以dna微阵列为基础的平衡易位断点的鉴定和定位

Country Status (10)

Country Link
US (1) US20110021371A1 (https=)
EP (1) EP2217921A4 (https=)
JP (1) JP5421278B2 (https=)
KR (1) KR20100097139A (https=)
CN (1) CN101918831B (https=)
AU (1) AU2008323649A1 (https=)
BR (1) BRPI0820272A2 (https=)
CA (1) CA2704625A1 (https=)
MX (1) MX2010005060A (https=)
WO (1) WO2009062166A2 (https=)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TWI873135B (zh) * 2019-05-08 2025-02-21 英商牛津生物力學公眾有限公司 Dna標記

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2147981A1 (en) * 2008-07-25 2010-01-27 Biotype AG Kit and method for evaluating detection properties in amplification reactions
ITMI20091007A1 (it) 2009-06-09 2010-12-10 Giovanni Porta Metodo di monitoraggio e trattamento
CN102630250A (zh) * 2009-09-25 2012-08-08 基因诊断测试公司 用于检测与癌症和其他疾病相关的染色体异常的多重(+/-)链阵列和测试
US20140235472A1 (en) * 2011-05-19 2014-08-21 University Of Utah Research Foundation Methods and compositions for the detection of balanced reciprocal translocations/rearrangements
WO2013033169A1 (en) * 2011-08-31 2013-03-07 Sanofi Methods of identifying genomic translocations associated with cancer
FR3010530B1 (fr) * 2013-09-11 2015-10-09 Univ Rouen Methode de diagnostic des hemopathies malignes et kit associe
CN103704205B (zh) * 2014-01-15 2015-09-23 山东大学 一种含微量稀土的牛精液冷冻稀释液及其应用
US10443090B2 (en) 2014-11-25 2019-10-15 Electronics And Telecommunications Research Institute Method and apparatus for detecting translocation
US20180148773A1 (en) * 2015-05-29 2018-05-31 Altergon Sa Methods, supports and kits for enhanced cgh analysis
CN105044168A (zh) * 2015-06-03 2015-11-11 福建医科大学 基于氟代核酸探针的双通道传感器检测急早幼粒PML/RARα基因序列的方法
CN112669902B (zh) * 2021-03-16 2021-06-04 北京贝瑞和康生物技术有限公司 检测基因组结构变异的方法、计算设备和存储介质

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030124539A1 (en) * 2001-12-21 2003-07-03 Affymetrix, Inc. A Corporation Organized Under The Laws Of The State Of Delaware High throughput resequencing and variation detection using high density microarrays
US20040097711A1 (en) * 2002-03-12 2004-05-20 Henry Yue Immunoglobulin superfamily proteins
CN1798974A (zh) * 2003-04-02 2006-07-05 阿德莱德研究及创新控股有限公司 基因组比较杂交
US20070238105A1 (en) * 2006-04-07 2007-10-11 Agilent Technologies, Inc. High resolution chromosomal mapping

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5830645A (en) * 1994-12-09 1998-11-03 The Regents Of The University Of California Comparative fluorescence hybridization to nucleic acid arrays
US6251601B1 (en) * 1999-02-02 2001-06-26 Vysis, Inc. Simultaneous measurement of gene expression and genomic abnormalities using nucleic acid microarrays
AU2002259230A1 (en) * 2001-05-14 2002-11-25 Cancer Genetics, Inc. Methods of analyzing chromosomal translocations using fluorescence in situ hybridization (fish)
US20050159378A1 (en) * 2001-05-18 2005-07-21 Sirna Therapeutics, Inc. RNA interference mediated inhibition of Myc and/or Myb gene expression using short interfering nucleic acid (siNA)
US7198897B2 (en) * 2001-12-19 2007-04-03 Brandeis University Late-PCR
US20050112689A1 (en) * 2003-04-04 2005-05-26 Robert Kincaid Systems and methods for statistically analyzing apparent CGH data anomalies and plotting same
DE102005028381A1 (de) * 2005-06-20 2006-12-28 Wella Ag Produktabgabesystem zum Versprühen haarkerantinreduzierende oder oxidierende Wirkstoffe enthaltender Zusammensetzungen
DE102005031734A1 (de) * 2005-07-07 2007-01-18 GM Global Technology Operations, Inc., Detroit Verfahren zur Berechnung des Unterdruckes im Bremskraftverstärker eines Fahrzeugs mit Otto-Motor
GB0516797D0 (en) * 2005-08-16 2005-09-21 Oxford Gene Tech Ip Ltd CGH method
US8076074B2 (en) * 2005-11-29 2011-12-13 Quest Diagnostics Investments Incorporated Balanced translocation in comparative hybridization

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030124539A1 (en) * 2001-12-21 2003-07-03 Affymetrix, Inc. A Corporation Organized Under The Laws Of The State Of Delaware High throughput resequencing and variation detection using high density microarrays
US20040097711A1 (en) * 2002-03-12 2004-05-20 Henry Yue Immunoglobulin superfamily proteins
CN1798974A (zh) * 2003-04-02 2006-07-05 阿德莱德研究及创新控股有限公司 基因组比较杂交
US20070238105A1 (en) * 2006-04-07 2007-10-11 Agilent Technologies, Inc. High resolution chromosomal mapping

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
Jian-Yong Li等.Detection of translocation t (11;14)(q13;q32) in mantle cell lymphoma by fluorescence in situ hybridization.《American Journal of Pathology》.1999,第154卷(第5期), *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TWI873135B (zh) * 2019-05-08 2025-02-21 英商牛津生物力學公眾有限公司 Dna標記

Also Published As

Publication number Publication date
KR20100097139A (ko) 2010-09-02
WO2009062166A2 (en) 2009-05-14
MX2010005060A (es) 2010-07-05
EP2217921A2 (en) 2010-08-18
JP5421278B2 (ja) 2014-02-19
JP2011505122A (ja) 2011-02-24
CN101918831A (zh) 2010-12-15
CA2704625A1 (en) 2009-05-14
AU2008323649A1 (en) 2009-05-14
BRPI0820272A2 (pt) 2015-05-26
US20110021371A1 (en) 2011-01-27
EP2217921A4 (en) 2011-07-06
WO2009062166A3 (en) 2009-12-30

Similar Documents

Publication Publication Date Title
CN101918831B (zh) 以dna微阵列为基础的平衡易位断点的鉴定和定位
CA2810931C (en) Direct capture, amplification and sequencing of target dna using immobilized primers
ES2886923T3 (es) Métodos y composición para generar sondas de ADN de secuencia única, marcaje de sondas de ADN y el uso de estas sondas
JP2015508655A5 (https=)
US20150024948A1 (en) Method for detecting balanced chromosomal aberrations in a genome
JP2015508995A (ja) 核酸ハイブリダイゼーションプローブ
WO2013038534A1 (ja) 標的核酸の検出方法
US8680257B2 (en) Kits for comparative transcript analysis and mutant sequence enrichment
US20240060066A1 (en) Method for the clustering of dna sequences
US20260009021A1 (en) Variant allele enrichment by unidirectional dual probe primer extension
JP6974504B2 (ja) 配列に基づく遺伝子試験のための対照を作製するための組成物及び方法
WO2018049260A1 (en) Reusable microarray compositions and methods
US20140349879A1 (en) Method for detecting nucleotide mutation, and detection kit
ES2629979T3 (es) Métodos y composición para generar sondas de ADN de secuencia única, marcaje de sondas de ADN y el uso de estas sondas
TW202426647A (zh) 專一性地結合甲基化dna片段的dna適體及其篩選方法與應用
Sepers et al. Multiplex Ligation-Dependent Probe Amplification (MLPA) and Methylation-Specific (MS)-MLPA: Multiplex Detection of DNA/mRNA Copy Number and Methylation Changes
JP2004523221A (ja) 部分相補的プローブを用いた遺伝子型分類

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
C14 Grant of patent or utility model
GR01 Patent grant
CF01 Termination of patent right due to non-payment of annual fee

Granted publication date: 20141015

Termination date: 20151110

EXPY Termination of patent right or utility model