CA2626977A1 - Nucleic acid amplification using non-random primers - Google Patents

Nucleic acid amplification using non-random primers Download PDF

Info

Publication number
CA2626977A1
CA2626977A1 CA002626977A CA2626977A CA2626977A1 CA 2626977 A1 CA2626977 A1 CA 2626977A1 CA 002626977 A CA002626977 A CA 002626977A CA 2626977 A CA2626977 A CA 2626977A CA 2626977 A1 CA2626977 A1 CA 2626977A1
Authority
CA
Canada
Prior art keywords
population
oligonucleotides
nucleic acid
seq
nos
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002626977A
Other languages
English (en)
French (fr)
Inventor
John Castle
Christopher K. Raymond
Christopher Armour
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Rosetta Inpharmatics LLC
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2626977A1 publication Critical patent/CA2626977A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA002626977A 2005-10-27 2006-10-27 Nucleic acid amplification using non-random primers Abandoned CA2626977A1 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US73152905P 2005-10-27 2005-10-27
US60/731,529 2005-10-27
US79045806P 2006-04-07 2006-04-07
US60/790,458 2006-04-07
PCT/US2006/042250 WO2007050990A2 (en) 2005-10-27 2006-10-27 Nucleic acid amplification using non-random primers

Publications (1)

Publication Number Publication Date
CA2626977A1 true CA2626977A1 (en) 2007-05-03

Family

ID=37968610

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002626977A Abandoned CA2626977A1 (en) 2005-10-27 2006-10-27 Nucleic acid amplification using non-random primers

Country Status (5)

Country Link
US (2) US20080187969A1 (OSRAM)
EP (2) EP1941058A4 (OSRAM)
JP (1) JP5409005B2 (OSRAM)
CA (1) CA2626977A1 (OSRAM)
WO (1) WO2007050990A2 (OSRAM)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2206779B1 (en) 2005-12-06 2013-02-13 Life Technologies Corporation Reverse transcription primers and methods of design
MX2009009530A (es) * 2007-03-07 2010-05-19 Nventa Biopharmaceuticals Corp Composiciones de acidos nucleicos cerrados bicatenarios.
CN102124126A (zh) * 2007-10-26 2011-07-13 生命技术公司 使用非随机引物的cdna合成
WO2009091719A1 (en) 2008-01-14 2009-07-23 Applera Corporation Compositions, methods, and kits for detecting ribonucleic acid
EP2285961A4 (en) * 2008-05-15 2012-10-17 Topigen Pharmaceuticals Inc OLIGONUCLEOTIDES FOR THE TREATMENT OF INFLAMMATION AND NEOPLASTIC CELL REPRODUCTION
US20100159533A1 (en) * 2008-11-24 2010-06-24 Helicos Biosciences Corporation Simplified sample preparation for rna analysis
EP3181702B1 (en) * 2008-11-24 2019-04-17 Sequenom, Inc. Improving nucleic acid quantitation by compressing the dynamic range of high-abundance molecules
WO2011032053A1 (en) * 2009-09-11 2011-03-17 Nugen Technologies, Inc. Compositions and methods for whole transcriptome analysis
WO2012064739A2 (en) * 2010-11-08 2012-05-18 The Trustees Of Columbia University In The City Of New York Microbial enrichment primers
CN107058059B (zh) 2011-09-26 2020-08-07 基因技术股份公司 高效的小体积核酸合成
WO2014153188A2 (en) 2013-03-14 2014-09-25 Life Technologies Corporation High efficiency, small volume nucleic acid synthesis
CN107532129B (zh) 2014-12-09 2022-09-13 生命技术公司 高效小体积核酸合成
EP3974528A4 (en) * 2019-05-20 2022-11-09 Kyushu University, National University Corporation OLIGONUCLEOTIDE, METHOD AND OMICS ANALYSIS KIT

Family Cites Families (61)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5723597A (en) * 1983-01-10 1998-03-03 Gen-Probe Incorporated Ribosomal nucleic acid probes for detecting organisms or groups of organisms
US6221581B1 (en) * 1984-04-27 2001-04-24 Enzo Diagnostics, Inc. Processes for detecting polynucleotides, determining genetic mutations or defects in genetic material, separating or isolating nucleic acid of interest from samples, and useful compositions of matter and multihybrid complex compositions
US5541308A (en) * 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
US6150517A (en) * 1986-11-24 2000-11-21 Gen-Probe Methods for making oligonucleotide probes for the detection and/or quantitation of non-viral organisms
US5639604A (en) * 1987-09-21 1997-06-17 Gen-Probe Incorporated Homogeneous protection assay
US5084565A (en) * 1988-08-18 1992-01-28 Gene-Trak Systems Probes for the specific detection of escherichia coli and shigella
US5512439A (en) * 1988-11-21 1996-04-30 Dynal As Oligonucleotide-linked magnetic particles and uses thereof
US5708154A (en) * 1989-02-24 1998-01-13 City Of Hope RNA-DNA hybrid molecules of nucleic acid
JP3046838B2 (ja) * 1989-03-10 2000-05-29 バイシス・インコーポレーテツド 親和性捕捉法の妨害の防止
WO1990015157A1 (en) * 1989-05-31 1990-12-13 Gene-Trak Systems Universal eubacteria nucleic acid probes and methods
US5744101A (en) * 1989-06-07 1998-04-28 Affymax Technologies N.V. Photolabile nucleoside protecting groups
US5545522A (en) * 1989-09-22 1996-08-13 Van Gelder; Russell N. Process for amplifying a target polynucleotide sequence using a single primer-promoter complex
CA2025181A1 (en) * 1989-10-12 1991-04-13 William G. Weisburg Nucleic acid probes and methods for detecting fungi
EP0675966B1 (en) * 1992-02-19 2004-10-06 The Public Health Research Institute Of The City Of New York, Inc. Novel oligonucleotide arrays and their use for sorting, isolating, sequencing, and manipulating nucleic acids
CA2135073C (en) * 1992-05-06 2002-11-19 Daniel L. Kacian Nucleic acid sequence amplification method, composition and kit
GB9211979D0 (en) * 1992-06-05 1992-07-15 Buchard Ole Uses of nucleic acid analogues
US5633134A (en) * 1992-10-06 1997-05-27 Ig Laboratories, Inc. Method for simultaneously detecting multiple mutations in a DNA sample
US5500356A (en) * 1993-08-10 1996-03-19 Life Technologies, Inc. Method of nucleic acid sequence selection
US6309823B1 (en) * 1993-10-26 2001-10-30 Affymetrix, Inc. Arrays of nucleic acid probes for analyzing biotransformation genes and methods of using the same
US5639428A (en) * 1994-07-19 1997-06-17 Becton Dickinson And Company Method and apparatus for fully automated nucleic acid amplification, nucleic acid assay and immunoassay
FR2737502B1 (fr) * 1995-07-31 1997-10-24 Genset Sa Procede de detection d'acides nucleiques utilisant des sondes nucleotidiques permettant a la fois une capture specifique et une detection
US6013440A (en) * 1996-03-11 2000-01-11 Affymetrix, Inc. Nucleic acid affinity columns
JPH11509427A (ja) * 1996-05-14 1999-08-24 ベーリンガー マンハイム ゲーエムベーハー 試料中の核酸分子の発現の同定方法および／または定量方法
US6203978B1 (en) * 1996-05-31 2001-03-20 Du Vergier Ltd. Capture of single stranded nucleic acids
AU4495497A (en) * 1996-09-19 1998-04-14 Affymetrix, Inc. Identification of molecular sequence signatures and methods involving the same
WO1998037187A1 (en) * 1997-02-21 1998-08-27 Takara Shuzo Co., Ltd. Cancer-associated genes
WO1998050583A1 (en) * 1997-05-02 1998-11-12 Gen-Probe Incorporated Two-step hybridization and capture of a polynucleotide
EP1007739A2 (en) * 1997-09-05 2000-06-14 Sidney Kimmel Cancer Center Selection of pcr primer pairs to amplify a group of nucleotide sequences
US5932451A (en) * 1997-11-19 1999-08-03 Incyte Pharmaceuticals, Inc. Method for unbiased mRNA amplification
US6270973B1 (en) * 1998-03-13 2001-08-07 Promega Corporation Multiplex method for nucleic acid detection
US6197510B1 (en) * 1998-10-01 2001-03-06 Bio-Id Diagnostic Inc. Multi-loci genomic analysis
US6316193B1 (en) * 1998-10-06 2001-11-13 Origene Technologies, Inc. Rapid-screen cDNA library panels
US6951722B2 (en) * 1999-03-19 2005-10-04 Takara Bio Inc. Method for amplifying nucleic acid sequence
US6582906B1 (en) * 1999-04-05 2003-06-24 Affymetrix, Inc. Proportional amplification of nucleic acids
US6132997A (en) * 1999-05-28 2000-10-17 Agilent Technologies Method for linear mRNA amplification
US6465183B2 (en) * 1999-07-01 2002-10-15 Agilent Technologies, Inc. Multidentate arrays
US6495320B1 (en) * 1999-07-21 2002-12-17 Affymetrix, Inc. Even length proportional amplification of nucleic acids
US6294338B1 (en) * 1999-07-23 2001-09-25 Gen-Probe Incorporated Polynucleotide amplification method
US20020072061A1 (en) * 1999-07-30 2002-06-13 Alex Chenchik Methods and compositions for use in synthesizing nucleic acids
AU2001232485A1 (en) * 2000-01-13 2001-07-24 Amsterdam Support Diagnostics B.V. A universal nucleic acid amplification system for nucleic acids in a sample
US20030022318A1 (en) * 2000-01-25 2003-01-30 Epiclone, Inc. Method for thermocycling amplification of nucleic acid sequences and the generation of related peptides thereof
US6235483B1 (en) * 2000-01-31 2001-05-22 Agilent Technologies, Inc. Methods and kits for indirect labeling of nucleic acids
US20010026919A1 (en) * 2000-02-08 2001-10-04 Alex Chenchik Nucleic acid assays employing universal arrays
US7601497B2 (en) * 2000-06-15 2009-10-13 Qiagen Gaithersburg, Inc. Detection of nucleic acids by target-specific hybrid capture method
US6465219B1 (en) * 2000-08-07 2002-10-15 Genemed Biotechnologies, Inc. Polynucleotide pools enriched in either high-abundance or low-abundance sequences
WO2002044399A2 (en) * 2000-11-28 2002-06-06 Rosetta Inpharmatics, Inc. In vitro transcription method for rna amplification
US6391592B1 (en) * 2000-12-14 2002-05-21 Affymetrix, Inc. Blocker-aided target amplification of nucleic acids
US6448387B1 (en) * 2000-12-18 2002-09-10 Monsanto Technology, Llc Polymeric arrays adapted for high expressing polynucleotides
US20030104432A1 (en) * 2001-07-27 2003-06-05 The Regents Of The University Of California Methods of amplifying sense strand RNA
AU2002222737A1 (en) * 2001-12-08 2003-06-23 Seegene, Inc Annealing control primer system for regulating primer annealing specificity and its applications
EP1572902B1 (en) * 2002-02-01 2014-06-11 Life Technologies Corporation HIGH POTENCY siRNAS FOR REDUCING THE EXPRESSION OF TARGET GENES
US20030211483A1 (en) * 2002-05-09 2003-11-13 Schroeder Benjamin G. Methods for the enrichment of low-abundance polynucleotides
US20040248094A1 (en) * 2002-06-12 2004-12-09 Ford Lance P. Methods and compositions relating to labeled RNA molecules that reduce gene expression
AU2003276666A1 (en) * 2002-06-12 2003-12-31 Ambion, Inc. Methods and compositions relating to polypeptides with rnase iii domains that mediate rna interference
US20040029275A1 (en) * 2002-08-10 2004-02-12 David Brown Methods and compositions for reducing target gene expression using cocktails of siRNAs or constructs expressing siRNAs
US20050003369A1 (en) * 2002-10-10 2005-01-06 Affymetrix, Inc. Method for depleting specific nucleic acids from a mixture
WO2005010209A2 (de) * 2003-07-24 2005-02-03 Qiagen Gmbh Verfahren zur reversen transkription und/oder amplifikation von nukleinsäuren
US20050059024A1 (en) * 2003-07-25 2005-03-17 Ambion, Inc. Methods and compositions for isolating small RNA molecules
US7265448B2 (en) * 2004-01-26 2007-09-04 Marvell World Trade Ltd. Interconnect structure for power transistors
WO2006110314A2 (en) * 2005-03-25 2006-10-19 Ambion, Inc. Methods and compositions for depleting abundant rna transcripts
US20060255053A1 (en) * 2005-05-16 2006-11-16 Empire Industrial Corp. Sealable container

Also Published As

Publication number Publication date
US20110294701A1 (en) 2011-12-01
EP1941058A4 (en) 2010-01-20
JP2009513142A (ja) 2009-04-02
WO2007050990A2 (en) 2007-05-03
US20080187969A1 (en) 2008-08-07
JP5409005B2 (ja) 2014-02-05
EP1941058A2 (en) 2008-07-09
WO2007050990A3 (en) 2007-12-13
EP2479291A1 (en) 2012-07-25

Similar Documents

Publication Publication Date Title
US20110294701A1 (en) Nucleic acid amplification using non-random primers
US20050003369A1 (en) Method for depleting specific nucleic acids from a mixture
US6610490B2 (en) Compositions, kits and uses of nucleotides having altered base pairing characteristics
EP1856257B1 (en) Processes using dual specificity oligonucleotide and dual specificity oligonucleotide
EP2365078B1 (en) Processes using dual specificity oligonucleotide and dual specificity oligonucleotide
JP2011500092A (ja) 非ランダムプライマーを用いたｃＤＮＡ合成の方法
US20120028310A1 (en) Isothermal nucleic acid amplification methods and compositions
JP2006512094A5 (OSRAM)
EP3902922A1 (en) Method and kit for preparing complementary dna
CA2436428A1 (en) Methods of analysis of nucleic acids
EP3914729A1 (en) Methods of nucleic acid detection and primer design
CN117512078A (zh) 单引物至双引物扩增子转换
US20050170375A1 (en) Methods for enhancing gene expression analysis
CN114341353A (zh) 扩增mRNA和制备全长mRNA文库的方法
US20020072061A1 (en) Methods and compositions for use in synthesizing nucleic acids
CN113166742B (zh) 用于消耗和富集核酸序列的方法和试剂盒
US20060234277A1 (en) Method for selectively blocking hemoglobin RNA amplification
WO2000018966A2 (en) A new strategy for genome-wide gene analysis: integrated procedures for gene identification
CN114250275A (zh) 一种荧光定量pcr反应系统、pcr反应试剂盒及核酸定量检测方法
HK1162196A1 (en) Method for quantification of small rna species
HK1162196B (en) Method for quantification of small rna species

Legal Events

Date Code Title Description
FZDE Discontinued
FZDE Discontinued

Effective date: 20121029